Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:03 (10106): wrapper (7.7.26015): starting
18:03:03 (10106): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 18:03:03] Arguments: --nthreads 8
[2026-01-08 18:03:03] Threads: 8
[2026-01-08 18:03:03] Checking for CVMFS
[2026-01-08 18:03:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:03:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:03:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:03:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:03:04] 2.11.2.0 2822 135854 84828 154922 1 57 19147444 20275201 1 130560 0 33895541 99.832 8446659 31239 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 18:03:04] CVMFS is ok
[2026-01-08 18:03:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 18:03:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 18:03:04] Further information can be found at the LHC@home message board.
[2026-01-08 18:03:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:03:04] Checking for apptainer binary...
[2026-01-08 18:03:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:03:04] Running /usr/bin/apptainer --version
[2026-01-08 18:03:04] apptainer version 1.3.2-1.el7
[2026-01-08 18:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:03:06] c-204-37.aglt2.org
[2026-01-08 18:03:06] apptainer works
[2026-01-08 18:03:06] Set ATHENA_PROC_NUMBER=8
[2026-01-08 18:03:06] Set ATHENA_CORE_NUMBER=8
[2026-01-08 18:03:06] Starting ATLAS job with PandaID=6963143898
[2026-01-08 18:03:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:09:58 (11131): wrapper (7.7.26015): starting
20:09:58 (11131): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:09:58] Arguments: --nthreads 8
[2026-01-08 20:09:58] Threads: 8
[2026-01-08 20:09:58] This job has been restarted, cleaning up previous attempt
[2026-01-08 20:09:58] Checking for CVMFS
[2026-01-08 20:09:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:09:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:09:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:09:58] 2.11.2.0 2822 135981 85808 154925 2 18 19326788 20275200 1 130560 0 33973621 99.832 8450768 31243 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:09:58] CVMFS is ok
[2026-01-08 20:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:09:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:09:58] Further information can be found at the LHC@home message board.
[2026-01-08 20:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:09:58] Checking for apptainer binary...
[2026-01-08 20:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:09:58] Running /usr/bin/apptainer --version
[2026-01-08 20:09:58] apptainer version 1.3.2-1.el7
[2026-01-08 20:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:10:00] c-204-37.aglt2.org
[2026-01-08 20:10:00] apptainer works
[2026-01-08 20:10:00] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:10:00] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:10:00] Starting ATLAS job with PandaID=6963143898
[2026-01-08 20:10:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:04:48]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:04:48] 2026-01-09 04:04:15,491 | INFO     | monitor loop #759: job 0:6963143898 is in state 'finished'
[2026-01-08 23:04:48] 2026-01-09 04:04:15,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,488 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 23:04:48] 2026-01-09 04:04:16,491 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-08 23:04:48] 2026-01-09 04:04:16,494 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963143898/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,495 | INFO     | extracted standard info from prmon json
[2026-01-08 23:04:48] 2026-01-09 04:04:16,495 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:04:48] 2026-01-09 04:04:16,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:04:48] 2026-01-09 04:04:16,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:04:48] 2026-01-09 04:04:16,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:04:48] 2026-01-09 04:04:16,500 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:04:48] 2026-01-09 04:04:16,500 | INFO     | sum of square deviations: 1550429070.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,502 | INFO     | sum of deviations: 13246074726.000002
[2026-01-08 23:04:48] 2026-01-09 04:04:16,502 | INFO     | mean x: 1767926241.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,502 | INFO     | mean y: 2464023.1052631577
[2026-01-08 23:04:48] 2026-01-09 04:04:16,502 | INFO     | intersect: -15101795534.116718
[2026-01-08 23:04:48] 2026-01-09 04:04:16,502 | INFO     | chi2: 2.214109172586295
[2026-01-08 23:04:48] 2026-01-09 04:04:16,503 | INFO     | sum of square deviations: 1418361477.5
[2026-01-08 23:04:48] 2026-01-09 04:04:16,504 | INFO     | sum of deviations: 23816216763.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,504 | INFO     | mean x: 1767926088.5
[2026-01-08 23:04:48] 2026-01-09 04:04:16,504 | INFO     | mean y: 2475919.7590361447
[2026-01-08 23:04:48] 2026-01-09 04:04:16,504 | INFO     | intersect: -29683405720.86013
[2026-01-08 23:04:48] 2026-01-09 04:04:16,504 | INFO     | chi2: 1.4469314013688754
[2026-01-08 23:04:48] 2026-01-09 04:04:16,504 | INFO     | current chi2=1.4469314013688754 (change=34.6495006080157 %)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,505 | INFO     | sum of square deviations: 1294014960.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,506 | INFO     | sum of deviations: 22896937979.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,506 | INFO     | mean x: 1767925936.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,506 | INFO     | mean y: 2474792.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,506 | INFO     | intersect: -31280077388.121258
[2026-01-08 23:04:48] 2026-01-09 04:04:16,506 | INFO     | chi2: 1.4482543721370942
[2026-01-08 23:04:48] 2026-01-09 04:04:16,506 | INFO     | current chi2=1.4482543721370942 (change=-0.09143286039456627 %)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,507 | INFO     | right removable region: 160
[2026-01-08 23:04:48] 2026-01-09 04:04:16,507 | INFO     | sum of square deviations: 1418361477.5
[2026-01-08 23:04:48] 2026-01-09 04:04:16,508 | INFO     | sum of deviations: -11201781116.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,508 | INFO     | mean x: 1767926393.5
[2026-01-08 23:04:48] 2026-01-09 04:04:16,508 | INFO     | mean y: 2491843.1445783135
[2026-01-08 23:04:48] 2026-01-09 04:04:16,508 | INFO     | intersect: 13965028758.693518
[2026-01-08 23:04:48] 2026-01-09 04:04:16,508 | INFO     | chi2: 0.8257447994879503
[2026-01-08 23:04:48] 2026-01-09 04:04:16,509 | INFO     | current chi2=0.8257447994879503 (change=62.70532592919075 %)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,509 | INFO     | sum of square deviations: 1294014960.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,510 | INFO     | sum of deviations: -6976383889.000001
[2026-01-08 23:04:48] 2026-01-09 04:04:16,510 | INFO     | mean x: 1767926546.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,510 | INFO     | mean y: 2486606.7204968943
[2026-01-08 23:04:48] 2026-01-09 04:04:16,510 | INFO     | intersect: 9533855759.090899
[2026-01-08 23:04:48] 2026-01-09 04:04:16,511 | INFO     | chi2: 0.793922483252587
[2026-01-08 23:04:48] 2026-01-09 04:04:16,511 | INFO     | current chi2=0.793922483252587 (change=3.8537713171304957 %)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,511 | INFO     | left removable region: 20
[2026-01-08 23:04:48] 2026-01-09 04:04:16,511 | INFO     | sum of square deviations: 850825255.0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,512 | INFO     | sum of deviations: 1907921552.5000002
[2026-01-08 23:04:48] 2026-01-09 04:04:16,512 | INFO     | mean x: 1767926515.5
[2026-01-08 23:04:48] 2026-01-09 04:04:16,512 | INFO     | mean y: 2501476.1071428573
[2026-01-08 23:04:48] 2026-01-09 04:04:16,512 | INFO     | intersect: -3961961358.4600744
[2026-01-08 23:04:48] 2026-01-09 04:04:16,512 | INFO     | chi2: 0.00027578540996918617
[2026-01-08 23:04:48] 2026-01-09 04:04:16,513 | INFO     | current memory leak: 2.24 B/s (using 140 data points, chi2=0.00)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,513 | INFO     | could have reported an average CPU frequency of 2014 MHz (9 samples)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,513 | INFO     | ..............................
[2026-01-08 23:04:48] 2026-01-09 04:04:16,513 | INFO     | . Timing measurements:
[2026-01-08 23:04:48] 2026-01-09 04:04:16,513 | INFO     | . get job = 0 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,513 | INFO     | . initial setup = 1 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,514 | INFO     | . payload setup = 9 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,514 | INFO     | . stage-in = 0 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,514 | INFO     | . payload execution = 10388 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,514 | INFO     | . stage-out = 2 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,514 | INFO     | . log creation = 0 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,514 | INFO     | ..............................
[2026-01-08 23:04:48] 2026-01-09 04:04:16,606 | INFO     | 
[2026-01-08 23:04:48] 2026-01-09 04:04:16,607 | INFO     | job summary report
[2026-01-08 23:04:48] 2026-01-09 04:04:16,607 | INFO     | --------------------------------------------------
[2026-01-08 23:04:48] 2026-01-09 04:04:16,607 | INFO     | PanDA job id: 6963143898
[2026-01-08 23:04:48] 2026-01-09 04:04:16,607 | INFO     | task id: 47898826
[2026-01-08 23:04:48] 2026-01-09 04:04:16,607 | INFO     | errors: (none)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,608 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:04:48] 2026-01-09 04:04:16,608 | INFO     | pilot state: finished 
[2026-01-08 23:04:48] 2026-01-09 04:04:16,608 | INFO     | transexitcode: 0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,608 | INFO     | exeerrorcode: 0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,608 | INFO     | exeerrordiag: 
[2026-01-08 23:04:48] 2026-01-09 04:04:16,608 | INFO     | exitcode: 0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,609 | INFO     | exitmsg: OK
[2026-01-08 23:04:48] 2026-01-09 04:04:16,609 | INFO     | cpuconsumptiontime: 78708 s
[2026-01-08 23:04:48] 2026-01-09 04:04:16,609 | INFO     | nevents: 400
[2026-01-08 23:04:48] 2026-01-09 04:04:16,609 | INFO     | neventsw: 0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,609 | INFO     | pid: 21439
[2026-01-08 23:04:48] 2026-01-09 04:04:16,609 | INFO     | pgrp: 21439
[2026-01-08 23:04:48] 2026-01-09 04:04:16,610 | INFO     | corecount: 8
[2026-01-08 23:04:48] 2026-01-09 04:04:16,610 | INFO     | event service: False
[2026-01-08 23:04:48] 2026-01-09 04:04:16,610 | INFO     | sizes: {0: 2283140, 1: 2283996, 9: 2284258, 12: 2284286, 10402: 2312931, 10403: 2312930, 10406: 2322112, 10407: 2322168, 10418: 2322454}
[2026-01-08 23:04:48] 2026-01-09 04:04:16,610 | INFO     | --------------------------------------------------
[2026-01-08 23:04:48] 2026-01-09 04:04:16,610 | INFO     | 
[2026-01-08 23:04:48] 2026-01-09 04:04:16,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 23:04:48] 2026-01-09 04:04:16,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:04:48] 2026-01-09 04:04:16,643 | INFO     | job 6963143898 has completed (purged errors)
[2026-01-08 23:04:48] 2026-01-09 04:04:16,643 | INFO     | overall cleanup function is called
[2026-01-08 23:04:48] 2026-01-09 04:04:17,651 | INFO     | --- collectZombieJob: --- 10, [21439]
[2026-01-08 23:04:48] 2026-01-09 04:04:17,652 | INFO     | zombie collector waiting for pid 21439
[2026-01-08 23:04:48] 2026-01-09 04:04:17,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:04:48] 2026-01-09 04:04:17,652 | INFO     | collected zombie processes
[2026-01-08 23:04:48] 2026-01-09 04:04:17,652 | INFO     | will attempt to kill all subprocesses of pid=21439
[2026-01-08 23:04:48] 2026-01-09 04:04:17,741 | INFO     | process IDs to be killed: [21439] (in reverse order)
[2026-01-08 23:04:48] 2026-01-09 04:04:17,796 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:04:48] 2026-01-09 04:04:17,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:04:48] 2026-01-09 04:04:17,799 | INFO     | did not find any defunct processes belonging to 21439
[2026-01-08 23:04:48] 2026-01-09 04:04:17,802 | INFO     | did not find any defunct processes belonging to 21439
[2026-01-08 23:04:48] 2026-01-09 04:04:17,802 | INFO     | ready for new job
[2026-01-08 23:04:48] 2026-01-09 04:04:17,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:04:48] 2026-01-09 04:04:17,804 | INFO     | ***************************************
[2026-01-08 23:04:48] 2026-01-09 04:04:17,804 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:04:48] 2026-01-09 04:04:17,804 | INFO     | ***************************************
[2026-01-08 23:04:48] 2026-01-09 04:04:17,804 | INFO     | 
[2026-01-08 23:04:48] 2026-01-09 04:04:17,805 | INFO     | architecture information:
[2026-01-08 23:04:48] 2026-01-09 04:04:17,805 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:04:48] 2026-01-09 04:04:17,822 | INFO     | cat /etc/os-release:
[2026-01-08 23:04:48] NAME="CentOS Linux"
[2026-01-08 23:04:48] VERSION="7 (Core)"
[2026-01-08 23:04:48] ID="centos"
[2026-01-08 23:04:48] ID_LIKE="rhel fedora"
[2026-01-08 23:04:48] VERSION_ID="7"
[2026-01-08 23:04:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:04:48] ANSI_COLOR="0;31"
[2026-01-08 23:04:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:04:48] HOME_URL="https://www.centos.org/"
[2026-01-08 23:04:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:04:48] 
[2026-01-08 23:04:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:04:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:04:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:04:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:04:48] 
[2026-01-08 23:04:48] 2026-01-09 04:04:17,823 | INFO     | ***************************************
[2026-01-08 23:04:48] 2026-01-09 04:04:18,326 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 23:04:48] 2026-01-09 04:04:18,347 | INFO     | sufficient remaining disk space (18507366400 B)
[2026-01-08 23:04:48] 2026-01-09 04:04:18,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:04:48] 2026-01-09 04:04:18,348 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:04:48] 2026-01-09 04:04:18,348 | INFO     | update_server=False
[2026-01-08 23:04:48] 2026-01-09 04:04:18,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:04:48] 2026-01-09 04:04:18,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:04:48] 2026-01-09 04:04:18,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:04:48] 2026-01-09 04:04:19,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:04:48] 2026-01-09 04:04:19,000 | INFO     | aborting loop
[2026-01-08 23:04:48] 2026-01-09 04:04:19,001 | INFO     | all data control threads have been joined
[2026-01-08 23:04:48] 2026-01-09 04:04:19,354 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:19,355 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:19,378 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:19,393 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:19,397 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:19,478 | INFO     | all job control threads have been joined
[2026-01-08 23:04:48] 2026-01-09 04:04:19,537 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:19,611 | INFO     | all payload control threads have been joined
[2026-01-08 23:04:48] 2026-01-09 04:04:19,716 | INFO     | [job] validate thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,006 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,007 | INFO     | [data] control thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,131 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,158 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,165 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,355 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,484 | INFO     | [job] control thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,614 | INFO     | [payload] control thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:20,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:04:48] 2026-01-09 04:04:24,908 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:04:48] 2026-01-09 04:04:35,850 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:04:48] 2026-01-09 04:04:37,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140305789249344)>', '<ExcThread(monitor, started 140304762005248)>']
[2026-01-08 23:04:48] 2026-01-09 04:04:42,532 | INFO     | all workflow threads have been joined
[2026-01-08 23:04:48] 2026-01-09 04:04:42,533 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:04:48] 2026-01-09 04:04:42,533 | INFO     | traces error code: 0
[2026-01-08 23:04:48] 2026-01-09 04:04:42,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:04:48] 2026-01-09 04:04:48,608 | INFO     | PID=14977 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 23:04:48] 2026-01-09 04:04:48,609 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:04:48] 2026-01-09 04:04:48,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:04:48] 2026-01-09 04:04:48,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:04:48] 2026-01-09 04:04:48,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:04:48] 2026-01-09 04:04:48,609 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 23:04:48] 2026-01-09 04:04:48,609 | INFO     | [monitor] control thread has ended
[2026-01-08 23:04:48] 2026-01-09 04:04:48,711 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:04:48] 2026-01-09 04:04:48,716 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:04:48] 2026-01-09 04:04:48,720 [wrapper] pilotpid: 14977
[2026-01-08 23:04:48] 2026-01-09 04:04:48,724 [wrapper] Pilot exit status: 0
[2026-01-08 23:04:48] 2026-01-09 04:04:48,744 [wrapper] pandaids: 6963143898 6963143898
[2026-01-08 23:04:48] 2026-01-09 04:04:48,792 [wrapper] cleanup supervisor_pilot  6412 14978
[2026-01-08 23:04:48] 2026-01-09 04:04:48,797 [wrapper] Test setup, not cleaning
[2026-01-08 23:04:48] 2026-01-09 04:04:48,802 [wrapper] apfmon messages muted
[2026-01-08 23:04:48] 2026-01-09 04:04:48,807 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:04:48] 2026-01-09 04:04:48,812 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:04:48]  *** Error codes and diagnostics ***
[2026-01-08 23:04:48]     "exeErrorCode": 0,
[2026-01-08 23:04:48]     "exeErrorDiag": "",
[2026-01-08 23:04:48]     "pilotErrorCode": 0,
[2026-01-08 23:04:48]     "pilotErrorDiag": "",
[2026-01-08 23:04:48]  *** Listing of results directory ***
[2026-01-08 23:04:48] total 656708
[2026-01-08 23:04:48] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 07:19 pilot3.tar.gz
[2026-01-08 23:04:48] -rwx------ 1 boincer umatlas     36322 Jan  8 07:22 runpilot2-wrapper.sh
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 07:22 queuedata.json
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas       100 Jan  8 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:04:48] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 18:03 run_atlas
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas       105 Jan  8 18:03 job.xml
[2026-01-08 23:04:48] -rw-r--r-- 3 boincer umatlas 224572616 Jan  8 18:03 EVNT.47898824._000989.pool.root.1
[2026-01-08 23:04:48] -rw-r--r-- 3 boincer umatlas 224572616 Jan  8 18:03 ATLAS.root_0
[2026-01-08 23:04:48] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:03 start_atlas.sh
[2026-01-08 23:04:48] drwxrwx--x 2 boincer umatlas      4096 Jan  8 18:03 shared
[2026-01-08 23:04:48] -rw-r--r-- 2 boincer umatlas    592390 Jan  8 18:03 input.tar.gz
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas         0 Jan  8 18:03 boinc_lockfile
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 20:10 pandaJob.out
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas        57 Jan  8 20:10 setup.sh.local
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas    989837 Jan  8 20:10 agis_schedconf.cvmfs.json
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas      5912 Jan  8 23:00 init_data.xml
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas 215762977 Jan  8 23:03 HITS.47898826._025122.pool.root.1
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas       531 Jan  8 23:03 boinc_task_state.xml
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas      1050 Jan  8 23:03 memory_monitor_summary.json
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas   1516240 Jan  8 23:04 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas    395847 Jan  8 23:04 log.47898826._025122.job.log.tgz.1
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas        96 Jan  8 23:04 pilot_heartbeat.json
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas      7848 Jan  8 23:04 heartbeat.json
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas        29 Jan  8 23:04 wrapper_checkpoint.txt
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 23:04 boinc_mmap_file
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas       815 Jan  8 23:04 pilotlog.txt
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas   1425468 Jan  8 23:04 log.47898826._025122.job.log.1
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas       357 Jan  8 23:04 output.list
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas       620 Jan  8 23:04 runtime_log
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas   1843200 Jan  8 23:04 result.tar.gz
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas       788 Jan  8 23:04 TqdLDmQD4x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtXkKDmWszd3n.diag
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas      9428 Jan  8 23:04 runtime_log.err
[2026-01-08 23:04:48] -rw-r--r-- 1 boincer umatlas     23229 Jan  8 23:04 stderr.txt
[2026-01-08 23:04:48] HITS file was successfully produced:
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas 215762977 Jan  8 23:03 shared/HITS.pool.root.1
[2026-01-08 23:04:48]  *** Contents of shared directory: ***
[2026-01-08 23:04:48] total 432420
[2026-01-08 23:04:48] -rw-r--r-- 3 boincer umatlas 224572616 Jan  8 18:03 ATLAS.root_0
[2026-01-08 23:04:48] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:03 start_atlas.sh
[2026-01-08 23:04:48] -rw-r--r-- 2 boincer umatlas    592390 Jan  8 18:03 input.tar.gz
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas 215762977 Jan  8 23:03 HITS.pool.root.1
[2026-01-08 23:04:48] -rw------- 1 boincer umatlas   1843200 Jan  8 23:04 result.tar.gz
23:04:50 (11131): run_atlas exited; CPU time 78666.405802
23:04:50 (11131): called boinc_finish(0)

</stderr_txt>
]]>

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