Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 23:57:54 (1043954): vboxwrapper version 26210
2026-01-08 23:57:54 (1043954): BOINC client version: 8.2.8
2026-01-08 23:57:54 (1043954): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-01-08 23:57:54 (1043954): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 23:57:54 (1043954): Create VM. (boinc_d5f8e5641a5e6bbd, slot#22)
2026-01-08 23:57:54 (1043954): Setting Memory Size for VM. (4096MB)
2026-01-08 23:57:54 (1043954): Setting CPU Count for VM. (1)
2026-01-08 23:57:55 (1043954): Setting Chipset Options for VM.
2026-01-08 23:57:55 (1043954): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 23:57:55 (1043954): Setting Boot Options for VM.
2026-01-08 23:57:55 (1043954): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 23:57:55 (1043954): Enabling VM Network Access.
2026-01-08 23:57:55 (1043954): Disabling USB Support for VM.
2026-01-08 23:57:55 (1043954): Disabling COM Port Support for VM.
2026-01-08 23:57:56 (1043954): Disabling LPT Port Support for VM.
2026-01-08 23:57:56 (1043954): Disabling Audio Support for VM.
2026-01-08 23:57:56 (1043954): Disabling Clipboard Support for VM.
2026-01-08 23:57:56 (1043954): Disabling Drag and Drop Support for VM.
2026-01-08 23:57:56 (1043954): Adding storage controller(s) to VM.
2026-01-08 23:57:56 (1043954): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 23:57:57 (1043954): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 23:57:57 (1043954): forwarding host port 59101 to guest port 80
2026-01-08 23:57:57 (1043954): Enabling remote desktop for VM.
2026-01-08 23:57:57 (1043954): Enabling shared directory for VM.
2026-01-08 23:57:58 (1043954): Starting VM using VBoxManage interface. (boinc_d5f8e5641a5e6bbd, slot#22)
2026-01-08 23:57:59 (1043954): Successfully started VM. (PID = '1044373')
2026-01-08 23:57:59 (1043954): Reporting VM Process ID to BOINC.
2026-01-08 23:57:59 (1043954): Guest Log: BIOS: VirtualBox 7.2.2
2026-01-08 23:57:59 (1043954): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 23:57:59 (1043954): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 23:57:59 (1043954): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 23:57:59 (1043954): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 23:57:59 (1043954): Detected: Web Application Enabled (http://localhost:59101)
2026-01-08 23:57:59 (1043954): Detected: Remote Desktop Enabled (localhost:57217)
2026-01-08 23:57:59 (1043954): Preference change detected
2026-01-08 23:57:59 (1043954): Setting CPU throttle for VM. (100%)
2026-01-08 23:57:59 (1043954): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 23:58:01 (1043954): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 23:58:01 (1043954): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 23:58:04 (1043954): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 23:58:04 (1043954): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 23:58:04 (1043954): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 23:58:10 (1043954): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 23:58:10 (1043954): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 23:58:26 (1043954): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.000272 main     Log opened 2026-01-08T22:58:24.734448000Z
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.000436 main     OS Product: Linux
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.000469 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.000492 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.000515 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.000516 main     Process ID: 1239
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.000517 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 23:58:26 (1043954): Guest Log: 00:00:00.002093 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 23:58:27 (1043954): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 23:58:27 (1043954): Guest Log: [INFO] Mounting shared directory
2026-01-08 23:58:27 (1043954): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 23:58:29 (1043954): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 23:58:29 (1043954): Guest Log: [INFO] Detected branch: prod
2026-01-08 23:58:29 (1043954): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 23:58:29 (1043954): Guest Log: Copying input files
2026-01-08 23:58:32 (1043954): Guest Log: Copied input files into RunAtlas.
2026-01-08 23:58:32 (1043954): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-08 23:58:41 (1043954): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 23:58:42 (1043954): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 23:58:42 (1043954): Guest Log: 2.6.3.0 1508 0 31552 154922 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-08 23:58:43 (1043954): Guest Log: copied the webapp to /var/www
2026-01-08 23:58:43 (1043954): Guest Log: core_number=1
2026-01-08 23:58:43 (1043954): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 23:58:43 (1043954): Guest Log:  *** Starting ATLAS job. (PandaID=6963143993 taskID=47898826) ***
2026-01-09 01:37:00 (1043954): Status Report: Elapsed Time: '6000.000000'
2026-01-09 01:37:00 (1043954): Status Report: CPU Time: '5877.720000'
2026-01-09 03:16:00 (1043954): Status Report: Elapsed Time: '12000.000000'
2026-01-09 03:16:00 (1043954): Status Report: CPU Time: '11800.080000'
2026-01-09 04:55:01 (1043954): Status Report: Elapsed Time: '18000.000000'
2026-01-09 04:55:01 (1043954): Status Report: CPU Time: '17721.550000'
2026-01-09 06:34:01 (1043954): Status Report: Elapsed Time: '24000.000000'
2026-01-09 06:34:01 (1043954): Status Report: CPU Time: '23644.610000'
2026-01-09 08:13:02 (1043954): Status Report: Elapsed Time: '30000.000000'
2026-01-09 08:13:02 (1043954): Status Report: CPU Time: '29568.070000'
2026-01-09 09:52:02 (1043954): Status Report: Elapsed Time: '36000.000000'
2026-01-09 09:52:02 (1043954): Status Report: CPU Time: '35492.550000'
2026-01-09 11:31:03 (1043954): Status Report: Elapsed Time: '42000.000000'
2026-01-09 11:31:03 (1043954): Status Report: CPU Time: '41415.450000'
2026-01-09 13:10:03 (1043954): Status Report: Elapsed Time: '48000.000000'
2026-01-09 13:10:03 (1043954): Status Report: CPU Time: '47339.450000'
2026-01-09 14:49:04 (1043954): Status Report: Elapsed Time: '54000.000000'
2026-01-09 14:49:04 (1043954): Status Report: CPU Time: '53263.280000'
2026-01-09 16:03:29 (1043954): Guest Log:  *** Job finished ***
2026-01-09 16:03:29 (1043954): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:19,309 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:19,310 | INFO     | traces error code: 0
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:19,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,684 | INFO     | PID=5856 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,685 | INFO     | found 0 job(s) in 20 queues
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,685 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,685 | CRITICAL | thread 'MainThread' is not alive
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,686 | INFO     | [monitor] control thread has ended
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,816 [wrapper] ==== pilot stdout END ====
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,824 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,831 [wrapper] pilotpid: 5856
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,837 [wrapper] Pilot exit status: 0
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,891 [wrapper] pandaids: 6963143993
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,932 [wrapper] cleanup supervisor_pilot 18601 5857
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,940 [wrapper] Test setup, not cleaning
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,948 [wrapper] apfmon messages muted
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,955 [wrapper] ==== wrapper stdout END ====
2026-01-09 16:03:29 (1043954): Guest Log: 2026-01-09 15:03:28,961 [wrapper] ==== wrapper stderr END ====
2026-01-09 16:03:29 (1043954): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 16:03:29 (1043954): Guest Log:     "exeErrorCode": 0,
2026-01-09 16:03:29 (1043954): Guest Log:     "exeErrorDiag": "",
2026-01-09 16:03:29 (1043954): Guest Log:     "pilotErrorCode": 0,
2026-01-09 16:03:29 (1043954): Guest Log:     "pilotErrorDiag": "",
2026-01-09 16:03:29 (1043954): Guest Log:  *** Listing of results directory ***
2026-01-09 16:03:29 (1043954): Guest Log: total 233764
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 12:19 pilot3.tar.gz
2026-01-09 16:03:29 (1043954): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 12:22 runpilot2-wrapper.sh
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 12:22 queuedata.json
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Jan  8 22:58 start_atlas.sh
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas    592390 Jan  8 22:58 input.tar.gz
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas      9918 Jan  8 22:58 init_data.xml
2026-01-09 16:03:29 (1043954): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 22:58 EVNT.47898824._001002.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Jan  8 22:58 pandaJob.out
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas        50 Jan  8 22:58 setup.sh.local
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas    989837 Jan  8 22:59 agis_schedconf.cvmfs.json
2026-01-09 16:03:29 (1043954): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 22:59 pilot3
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas 217994970 Jan  9 15:01 HITS.47898826._025217.pool.root.1
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas        95 Jan  9 15:02 pilot_heartbeat.json
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas      1015 Jan  9 15:02 memory_monitor_summary.json
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 15:02 agis_ddmendpoints.agis.ALL.json
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas    958181 Jan  9 15:02 log.47898826._025217.job.log.tgz.1
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas      7802 Jan  9 15:02 heartbeat.json
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas       814 Jan  9 15:03 pilotlog.txt
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas   7811329 Jan  9 15:03 log.47898826._025217.job.log.1
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 15:03 output.list
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 15:03 runtime_log
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas   8785920 Jan  9 15:03 result.tar.gz
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas       656 Jan  9 15:03 zMJLDmQD4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcKfKDmRUpCyn.diag
2026-01-09 16:03:29 (1043954): Guest Log: -rw-r--r--. 1 atlas atlas      9109 Jan  9 15:03 runtime_log.err
2026-01-09 16:03:29 (1043954): Guest Log: Looking for outputfile HITS.47898826._025217.pool.root.1
2026-01-09 16:03:29 (1043954): Guest Log: HITS file was successfully produced
2026-01-09 16:03:29 (1043954): Guest Log: -rw-------. 1 atlas atlas 217994970 Jan  9 15:01 /home/atlas/RunAtlas/HITS.47898826._025217.pool.root.1
2026-01-09 16:03:29 (1043954): Guest Log: Successfully finished the ATLAS job!
2026-01-09 16:03:29 (1043954): Guest Log: Copying the results back to the shared directory!
2026-01-09 16:03:30 (1043954): Guest Log:  *** Contents of shared directory: ***
2026-01-09 16:03:30 (1043954): Guest Log: total 230696
2026-01-09 16:03:30 (1043954): Guest Log: -rw-r--r--. 1 root root 226819628 Jan  8 22:57 ATLAS.root_0
2026-01-09 16:03:30 (1043954): Guest Log: -rw-r--r--. 1 root root      9918 Jan  8 22:57 init_data.xml
2026-01-09 16:03:30 (1043954): Guest Log: -rw-r--r--. 1 root root    592390 Jan  8 22:57 input.tar.gz
2026-01-09 16:03:30 (1043954): Guest Log: -rw-r--r--. 1 root root   8785920 Jan  9 15:03 result.tar.gz
2026-01-09 16:03:30 (1043954): Guest Log: -rw-r--r--. 1 root root     15847 Jan  8 22:57 start_atlas.sh
2026-01-09 16:03:30 (1043954): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 16:03:30 (1043954): VM Completion File Detected.
2026-01-09 16:03:30 (1043954): Powering off VM.
2026-01-09 16:03:31 (1043954): Successfully stopped VM.
2026-01-09 16:03:31 (1043954): Deregistering VM. (boinc_d5f8e5641a5e6bbd, slot#22)
2026-01-09 16:03:31 (1043954): Removing network bandwidth throttle group from VM.
2026-01-09 16:03:31 (1043954): Removing VM from VirtualBox.
2026-01-09 16:03:36 (1043954): called boinc_finish(0)

</stderr_txt>
]]>

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