Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:00:59 (21832): wrapper (7.7.26015): starting
06:00:59 (21832): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:00:59] Arguments: --nthreads 8
[2026-01-09 06:00:59] Threads: 8
[2026-01-09 06:00:59] Checking for CVMFS
[2026-01-09 06:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:00:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:00:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:00:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:00:59] 2.11.2.0 25293 34950 127780 154931 0 101 13207178 25165825 0 130560 0 13154768 99.779 9164782 3489 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:00:59] CVMFS is ok
[2026-01-09 06:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:00:59] Checking for apptainer binary...
[2026-01-09 06:00:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:00:59] Running /usr/bin/apptainer --version
[2026-01-09 06:00:59] apptainer version 1.3.2-1.el7
[2026-01-09 06:00:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:01:01] cg-vwn372.simple-grid.lan
[2026-01-09 06:01:01] apptainer works
[2026-01-09 06:01:01] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:01:01] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:01:01] Starting ATLAS job with PandaID=6963144717
[2026-01-09 06:01:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:49:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:49:39] 2026-01-09 07:48:33,393 | INFO     | intersect: -33669414321.59509
[2026-01-09 08:49:39] 2026-01-09 07:48:33,394 | INFO     | chi2: 1.4490660853178168
[2026-01-09 08:49:39] 2026-01-09 07:48:33,394 | INFO     | current chi2=1.4490660853178168 (change=-0.09027624512526783 %)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,394 | INFO     | right removable region: 158
[2026-01-09 08:49:39] 2026-01-09 07:48:33,394 | INFO     | sum of square deviations: 1246386160.0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,395 | INFO     | sum of deviations: 1049128995.9999999
[2026-01-09 08:49:39] 2026-01-09 07:48:33,395 | INFO     | mean x: 1767940031.0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,396 | INFO     | mean y: 2497085.8427672954
[2026-01-09 08:49:39] 2026-01-09 07:48:33,396 | INFO     | intersect: -1485642953.9272819
[2026-01-09 08:49:39] 2026-01-09 07:48:33,396 | INFO     | chi2: 0.040403882917144314
[2026-01-09 08:49:39] 2026-01-09 07:48:33,396 | INFO     | current chi2=0.040403882917144314 (change=97.2092123033397 %)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,397 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,398 | INFO     | sum of deviations: 1929128751.500002
[2026-01-09 08:49:39] 2026-01-09 07:48:33,398 | INFO     | mean x: 1767940183.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,398 | INFO     | mean y: 2495834.0844155843
[2026-01-09 08:49:39] 2026-01-09 07:48:33,398 | INFO     | intersect: -3009168091.8720016
[2026-01-09 08:49:39] 2026-01-09 07:48:33,398 | INFO     | chi2: 0.022102376728504194
[2026-01-09 08:49:39] 2026-01-09 07:48:33,399 | INFO     | current chi2=0.022102376728504194 (change=45.29640437323999 %)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,399 | INFO     | sum of square deviations: 1025693650.0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,400 | INFO     | sum of deviations: 3552246367.0000005
[2026-01-09 08:49:39] 2026-01-09 07:48:33,400 | INFO     | mean x: 1767940336.0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,400 | INFO     | mean y: 2493588.946308725
[2026-01-09 08:49:39] 2026-01-09 07:48:33,401 | INFO     | intersect: -6120347900.448463
[2026-01-09 08:49:39] 2026-01-09 07:48:33,401 | INFO     | chi2: 0.0006828932778070846
[2026-01-09 08:49:39] 2026-01-09 07:48:33,401 | INFO     | current chi2=0.0006828932778070846 (change=96.91031744596773 %)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,401 | INFO     | sum of square deviations: 925859220.0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,402 | INFO     | sum of deviations: 2761715494.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,403 | INFO     | mean x: 1767940488.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,403 | INFO     | mean y: 2494793.784722222
[2026-01-09 08:49:39] 2026-01-09 07:48:33,403 | INFO     | intersect: -5271037655.829323
[2026-01-09 08:49:39] 2026-01-09 07:48:33,403 | INFO     | chi2: 0.0003016289588751625
[2026-01-09 08:49:39] 2026-01-09 07:48:33,403 | INFO     | current chi2=0.0003016289588751625 (change=55.8307324617754 %)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,404 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,405 | INFO     | sum of deviations: 2204960778.0000005
[2026-01-09 08:49:39] 2026-01-09 07:48:33,405 | INFO     | mean x: 1767940641.0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,405 | INFO     | mean y: 2495704.726618705
[2026-01-09 08:49:39] 2026-01-09 07:48:33,405 | INFO     | intersect: -4678822921.728777
[2026-01-09 08:49:39] 2026-01-09 07:48:33,405 | INFO     | chi2: 0.00015016205926381653
[2026-01-09 08:49:39] 2026-01-09 07:48:33,405 | INFO     | current chi2=0.00015016205926381653 (change=50.21629891778221 %)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,406 | INFO     | sum of square deviations: 746051197.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,407 | INFO     | sum of deviations: 1886579909.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,407 | INFO     | mean x: 1767940793.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,407 | INFO     | mean y: 2496264.6641791044
[2026-01-09 08:49:39] 2026-01-09 07:48:33,407 | INFO     | intersect: -4468190992.9654665
[2026-01-09 08:49:39] 2026-01-09 07:48:33,407 | INFO     | chi2: 0.00013338136350426457
[2026-01-09 08:49:39] 2026-01-09 07:48:33,407 | INFO     | current chi2=0.00013338136350426457 (change=11.17505702959914 %)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,407 | INFO     | left removable region: 60
[2026-01-09 08:49:39] 2026-01-09 07:48:33,408 | INFO     | sum of square deviations: 291817564.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,408 | INFO     | sum of deviations: 553655794.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,408 | INFO     | mean x: 1767941525.5
[2026-01-09 08:49:39] 2026-01-09 07:48:33,409 | INFO     | mean y: 2498390.6224489794
[2026-01-09 08:49:39] 2026-01-09 07:48:33,409 | INFO     | intersect: -3351758477.388128
[2026-01-09 08:49:39] 2026-01-09 07:48:33,409 | INFO     | chi2: 8.690685511430066e-05
[2026-01-09 08:49:39] 2026-01-09 07:48:33,409 | INFO     | current memory leak: 1.90 B/s (using 98 data points, chi2=0.00)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | ..............................
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | . Timing measurements:
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | . get job = 0 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | . initial setup = 2 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | . payload setup = 7 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | . stage-in = 0 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,410 | INFO     | . payload execution = 10000 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,411 | INFO     | . stage-out = 0 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,411 | INFO     | . log creation = 0 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,411 | INFO     | ..............................
[2026-01-09 08:49:39] 2026-01-09 07:48:33,682 | INFO     | 
[2026-01-09 08:49:39] 2026-01-09 07:48:33,682 | INFO     | job summary report
[2026-01-09 08:49:39] 2026-01-09 07:48:33,682 | INFO     | --------------------------------------------------
[2026-01-09 08:49:39] 2026-01-09 07:48:33,682 | INFO     | PanDA job id: 6963144717
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | task id: 47898826
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | errors: (none)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | pilot state: finished 
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | transexitcode: 0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | exeerrorcode: 0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | exeerrordiag: 
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | exitcode: 0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | exitmsg: OK
[2026-01-09 08:49:39] 2026-01-09 07:48:33,683 | INFO     | cpuconsumptiontime: 75622 s
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | nevents: 400
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | neventsw: 0
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | pid: 32050
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | pgrp: 32050
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | corecount: 8
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | event service: False
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | sizes: {0: 2283792, 1: 2283991, 6: 2284253, 12: 2284281, 10011: 2312650, 10012: 2312649, 10014: 2321833, 10016: 2321889, 10021: 2322147}
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | --------------------------------------------------
[2026-01-09 08:49:39] 2026-01-09 07:48:33,684 | INFO     | 
[2026-01-09 08:49:39] 2026-01-09 07:48:33,685 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 08:49:39] 2026-01-09 07:48:33,706 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,707 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,707 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,707 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,709 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:49:39] 2026-01-09 07:48:33,709 | INFO     | job 6963144717 has completed (purged errors)
[2026-01-09 08:49:39] 2026-01-09 07:48:33,709 | INFO     | overall cleanup function is called
[2026-01-09 08:49:39] 2026-01-09 07:48:34,718 | INFO     | --- collectZombieJob: --- 10, [32050]
[2026-01-09 08:49:39] 2026-01-09 07:48:34,718 | INFO     | zombie collector waiting for pid 32050
[2026-01-09 08:49:39] 2026-01-09 07:48:34,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:49:39] 2026-01-09 07:48:34,718 | INFO     | collected zombie processes
[2026-01-09 08:49:39] 2026-01-09 07:48:34,718 | INFO     | will attempt to kill all subprocesses of pid=32050
[2026-01-09 08:49:39] 2026-01-09 07:48:34,782 | INFO     | process IDs to be killed: [32050] (in reverse order)
[2026-01-09 08:49:39] 2026-01-09 07:48:34,826 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:49:39] 2026-01-09 07:48:34,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:49:39] 2026-01-09 07:48:34,828 | INFO     | did not find any defunct processes belonging to 32050
[2026-01-09 08:49:39] 2026-01-09 07:48:34,830 | INFO     | did not find any defunct processes belonging to 32050
[2026-01-09 08:49:39] 2026-01-09 07:48:34,830 | INFO     | ready for new job
[2026-01-09 08:49:39] 2026-01-09 07:48:34,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:49:39] 2026-01-09 07:48:34,832 | INFO     | ***************************************
[2026-01-09 08:49:39] 2026-01-09 07:48:34,832 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:49:39] 2026-01-09 07:48:34,832 | INFO     | ***************************************
[2026-01-09 08:49:39] 2026-01-09 07:48:34,832 | INFO     | 
[2026-01-09 08:49:39] 2026-01-09 07:48:34,833 | INFO     | pilot is running in a VM
[2026-01-09 08:49:39] 2026-01-09 07:48:34,833 | INFO     | architecture information:
[2026-01-09 08:49:39] 2026-01-09 07:48:34,833 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:49:39] 2026-01-09 07:48:34,851 | INFO     | cat /etc/os-release:
[2026-01-09 08:49:39] NAME="CentOS Linux"
[2026-01-09 08:49:39] VERSION="7 (Core)"
[2026-01-09 08:49:39] ID="centos"
[2026-01-09 08:49:39] ID_LIKE="rhel fedora"
[2026-01-09 08:49:39] VERSION_ID="7"
[2026-01-09 08:49:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:49:39] ANSI_COLOR="0;31"
[2026-01-09 08:49:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:49:39] HOME_URL="https://www.centos.org/"
[2026-01-09 08:49:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:49:39] 
[2026-01-09 08:49:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:49:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:49:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:49:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:49:39] 
[2026-01-09 08:49:39] 2026-01-09 07:48:34,851 | INFO     | ***************************************
[2026-01-09 08:49:39] 2026-01-09 07:48:35,355 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 08:49:39] 2026-01-09 07:48:35,373 | INFO     | sufficient remaining disk space (498128125952 B)
[2026-01-09 08:49:39] 2026-01-09 07:48:35,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:49:39] 2026-01-09 07:48:35,373 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:49:39] 2026-01-09 07:48:35,373 | INFO     | update_server=False
[2026-01-09 08:49:39] 2026-01-09 07:48:35,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:49:39] 2026-01-09 07:48:35,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:49:39] 2026-01-09 07:48:35,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:49:39] 2026-01-09 07:48:35,509 | INFO     | aborting loop
[2026-01-09 08:49:39] 2026-01-09 07:48:35,667 | INFO     | all data control threads have been joined
[2026-01-09 08:49:39] 2026-01-09 07:48:35,986 | INFO     | all payload control threads have been joined
[2026-01-09 08:49:39] 2026-01-09 07:48:36,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:49:39] 2026-01-09 07:48:36,379 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:36,380 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:36,514 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:36,522 | INFO     | all job control threads have been joined
[2026-01-09 08:49:39] 2026-01-09 07:48:36,529 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:36,652 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:36,673 | INFO     | [data] control thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:36,991 | INFO     | [payload] control thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:37,081 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:37,329 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:37,446 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:37,489 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:37,527 | INFO     | [job] control thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:37,842 | INFO     | [job] validate thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:37,847 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:38,324 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:48:38,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:49:39] 2026-01-09 07:48:42,622 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:49:39] 2026-01-09 07:49:04,939 | INFO     | PID=25606 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 08:49:39] 2026-01-09 07:49:04,940 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:49:39] 2026-01-09 07:49:04,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:49:39] 2026-01-09 07:49:04,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:49:39] 2026-01-09 07:49:32,477 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:49:39] 2026-01-09 07:49:34,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097789757248)>', '<ExcThread(monitor, started 140097102001920)>']
[2026-01-09 08:49:39] 2026-01-09 07:49:35,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:49:39] 2026-01-09 07:49:35,094 | INFO     | [monitor] control thread has ended
[2026-01-09 08:49:39] 2026-01-09 07:49:39,240 | INFO     | all workflow threads have been joined
[2026-01-09 08:49:39] 2026-01-09 07:49:39,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:49:39] 2026-01-09 07:49:39,241 | INFO     | traces error code: 0
[2026-01-09 08:49:39] 2026-01-09 07:49:39,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:49:39] 2026-01-09 07:49:39,384 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:49:39] 2026-01-09 07:49:39,388 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:49:39] 2026-01-09 07:49:39,392 [wrapper] pilotpid: 25606
[2026-01-09 08:49:39] 2026-01-09 07:49:39,395 [wrapper] Pilot exit status: 0
[2026-01-09 08:49:39] 2026-01-09 07:49:39,415 [wrapper] pandaids: 6963144717
[2026-01-09 08:49:39] 2026-01-09 07:49:39,453 [wrapper] cleanup supervisor_pilot 18800 25607
[2026-01-09 08:49:39] 2026-01-09 07:49:39,459 [wrapper] Test setup, not cleaning
[2026-01-09 08:49:39] 2026-01-09 07:49:39,463 [wrapper] apfmon messages muted
[2026-01-09 08:49:39] 2026-01-09 07:49:39,466 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:49:39] 2026-01-09 07:49:39,470 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:49:39]  *** Error codes and diagnostics ***
[2026-01-09 08:49:39]     "exeErrorCode": 0,
[2026-01-09 08:49:39]     "exeErrorDiag": "",
[2026-01-09 08:49:39]     "pilotErrorCode": 0,
[2026-01-09 08:49:39]     "pilotErrorDiag": "",
[2026-01-09 08:49:39]  *** Listing of results directory ***
[2026-01-09 08:49:39] total 434888
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:19 pilot3.tar.gz
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:19 queuedata.json
[2026-01-09 08:49:39] -rwx------. 1 boinc boinc     36322 Jan  8 13:19 runpilot2-wrapper.sh
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:49:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:00 run_atlas
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:00 job.xml
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc      6390 Jan  9 06:00 init_data.xml
[2026-01-09 08:49:39] -rw-r--r--. 2 boinc boinc 223004747 Jan  9 06:00 EVNT.47898824._001036.pool.root.1
[2026-01-09 08:49:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:00 start_atlas.sh
[2026-01-09 08:49:39] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:00 shared
[2026-01-09 08:49:39] -rw-r--r--. 2 boinc boinc    592399 Jan  9 06:00 input.tar.gz
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:00 boinc_lockfile
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc      2515 Jan  9 06:01 pandaJob.out
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc    989771 Jan  9 06:01 agis_schedconf.cvmfs.json
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc   1516240 Jan  9 06:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:49:39] drwx------. 5 boinc boinc      4096 Jan  9 06:01 pilot3
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc 214941409 Jan  9 08:47 HITS.47898826._025844.pool.root.1
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc       531 Jan  9 08:47 boinc_task_state.xml
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc      1008 Jan  9 08:48 memory_monitor_summary.json
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc        95 Jan  9 08:48 pilot_heartbeat.json
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc    383010 Jan  9 08:48 log.47898826._025844.job.log.tgz.1
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc      7760 Jan  9 08:48 heartbeat.json
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc        28 Jan  9 08:49 wrapper_checkpoint.txt
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:49 boinc_mmap_file
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc      4810 Jan  9 08:49 pilotlog.txt
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc   1355907 Jan  9 08:49 log.47898826._025844.job.log.1
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc       357 Jan  9 08:49 output.list
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:49 runtime_log
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc   1761280 Jan  9 08:49 result.tar.gz
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc      8833 Jan  9 08:49 runtime_log.err
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc       655 Jan  9 08:49 oobMDmUA4x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLXkKDmlqwrkn.diag
[2026-01-09 08:49:39] -rw-r--r--. 1 boinc boinc     20649 Jan  9 08:49 stderr.txt
[2026-01-09 08:49:39] HITS file was successfully produced:
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc 214941409 Jan  9 08:47 shared/HITS.pool.root.1
[2026-01-09 08:49:39]  *** Contents of shared directory: ***
[2026-01-09 08:49:39] total 430000
[2026-01-09 08:49:39] -rw-r--r--. 2 boinc boinc 223004747 Jan  9 06:00 ATLAS.root_0
[2026-01-09 08:49:39] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:00 start_atlas.sh
[2026-01-09 08:49:39] -rw-r--r--. 2 boinc boinc    592399 Jan  9 06:00 input.tar.gz
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc 214941409 Jan  9 08:47 HITS.pool.root.1
[2026-01-09 08:49:39] -rw-------. 1 boinc boinc   1761280 Jan  9 08:49 result.tar.gz
08:49:41 (21832): run_atlas exited; CPU time 75689.567841
08:49:41 (21832): called boinc_finish(0)

</stderr_txt>
]]>

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