Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:00:06 (859): wrapper (7.7.26015): starting
18:00:06 (859): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 18:00:06] Arguments: --nthreads 12
[2026-01-08 18:00:06] Threads: 12
[2026-01-08 18:00:06] Checking for CVMFS
[2026-01-08 18:00:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:00:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:00:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:00:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:00:07] 2.11.2.0 3009 135500 99880 154922 1 57 17453372 20275201 1 130560 0 48740077 99.878 8065102 39462 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 18:00:07] CVMFS is ok
[2026-01-08 18:00:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 18:00:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 18:00:07] Further information can be found at the LHC@home message board.
[2026-01-08 18:00:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:00:07] Checking for apptainer binary...
[2026-01-08 18:00:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:00:07] Running /usr/bin/apptainer --version
[2026-01-08 18:00:07] apptainer version 1.3.2-1.el7
[2026-01-08 18:00:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:00:08] c-115-42.aglt2.org
[2026-01-08 18:00:08] apptainer works
[2026-01-08 18:00:08] Set ATHENA_PROC_NUMBER=12
[2026-01-08 18:00:08] Set ATHENA_CORE_NUMBER=12
[2026-01-08 18:00:08] Starting ATLAS job with PandaID=6963078287
[2026-01-08 18:00:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:41:51]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:41:51] 2026-01-09 02:41:03,169 | INFO     | monitor loop #997: job 0:6963078287 is in state 'finished'
[2026-01-08 21:41:51] 2026-01-09 02:41:03,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:41:51] 2026-01-09 02:41:03,523 | INFO     | time since job start (13240s) is within the limit (174528.0s)
[2026-01-08 21:41:51] 2026-01-09 02:41:04,639 | INFO     | PID=4705 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 21:41:51] 2026-01-09 02:41:05,275 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 21:41:51] 2026-01-09 02:41:05,279 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2026-01-08 21:41:51] 2026-01-09 02:41:05,281 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963078287/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,282 | INFO     | extracted standard info from prmon json
[2026-01-08 21:41:51] 2026-01-09 02:41:05,282 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:41:51] 2026-01-09 02:41:05,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:41:51] 2026-01-09 02:41:05,287 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:41:51] 2026-01-09 02:41:05,287 | INFO     | sum of square deviations: 3168469088.221197
[2026-01-08 21:41:51] 2026-01-09 02:41:05,288 | INFO     | sum of deviations: 79098439416.10129
[2026-01-08 21:41:51] 2026-01-09 02:41:05,289 | INFO     | mean x: 1767919840.059908
[2026-01-08 21:41:51] 2026-01-09 02:41:05,289 | INFO     | mean y: 3384582.069124424
[2026-01-08 21:41:51] 2026-01-09 02:41:05,289 | INFO     | intersect: -44131399904.658875
[2026-01-08 21:41:51] 2026-01-09 02:41:05,289 | INFO     | chi2: 5.02109205149871
[2026-01-08 21:41:51] 2026-01-09 02:41:05,289 | INFO     | sum of square deviations: 2954459738.202847
[2026-01-08 21:41:51] 2026-01-09 02:41:05,290 | INFO     | sum of deviations: 147047121867.3255
[2026-01-08 21:41:51] 2026-01-09 02:41:05,291 | INFO     | mean x: 1767919687.5613208
[2026-01-08 21:41:51] 2026-01-09 02:41:05,291 | INFO     | mean y: 3432858.5518867923
[2026-01-08 21:41:51] 2026-01-09 02:41:05,291 | INFO     | intersect: -87988120516.48509
[2026-01-08 21:41:51] 2026-01-09 02:41:05,291 | INFO     | chi2: 2.7913688305568267
[2026-01-08 21:41:51] 2026-01-09 02:41:05,291 | INFO     | current chi2=2.7913688305568267 (change=44.407136895177 %)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,292 | INFO     | sum of square deviations: 2750311038.1835837
[2026-01-08 21:41:51] 2026-01-09 02:41:05,293 | INFO     | sum of deviations: 169928663594.47357
[2026-01-08 21:41:51] 2026-01-09 02:41:05,293 | INFO     | mean x: 1767919535.0628018
[2026-01-08 21:41:51] 2026-01-09 02:41:05,293 | INFO     | mean y: 3449793.425120773
[2026-01-08 21:41:51] 2026-01-09 02:41:05,293 | INFO     | intersect: -109227906138.66414
[2026-01-08 21:41:51] 2026-01-09 02:41:05,293 | INFO     | chi2: 2.3294331586795565
[2026-01-08 21:41:51] 2026-01-09 02:41:05,293 | INFO     | current chi2=2.3294331586795565 (change=16.548714982431132 %)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,293 | INFO     | right removable region: 206
[2026-01-08 21:41:51] 2026-01-09 02:41:05,294 | INFO     | sum of square deviations: 2954451808.202847
[2026-01-08 21:41:51] 2026-01-09 02:41:05,295 | INFO     | sum of deviations: 15181900686.056572
[2026-01-08 21:41:51] 2026-01-09 02:41:05,295 | INFO     | mean x: 1767919992.5613208
[2026-01-08 21:41:51] 2026-01-09 02:41:05,295 | INFO     | mean y: 3429775.2264150945
[2026-01-08 21:41:51] 2026-01-09 02:41:05,295 | INFO     | intersect: -9081296424.550892
[2026-01-08 21:41:51] 2026-01-09 02:41:05,295 | INFO     | chi2: 2.8233796613447315
[2026-01-08 21:41:51] 2026-01-09 02:41:05,296 | INFO     | current chi2=2.8233796613447315 (change=43.769609630996484 %)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,296 | INFO     | sum of square deviations: 2750295178.1835837
[2026-01-08 21:41:51] 2026-01-09 02:41:05,297 | INFO     | sum of deviations: -209827290.77776337
[2026-01-08 21:41:51] 2026-01-09 02:41:05,297 | INFO     | mean x: 1767920145.0628018
[2026-01-08 21:41:51] 2026-01-09 02:41:05,297 | INFO     | mean y: 3441259.4444444445
[2026-01-08 21:41:51] 2026-01-09 02:41:05,297 | INFO     | intersect: 138320561.5980973
[2026-01-08 21:41:51] 2026-01-09 02:41:05,297 | INFO     | chi2: 2.757119882987168
[2026-01-08 21:41:51] 2026-01-09 02:41:05,298 | INFO     | current chi2=2.757119882987168 (change=2.3468249511298405 %)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,298 | INFO     | left removable region: 20
[2026-01-08 21:41:51] 2026-01-09 02:41:05,298 | INFO     | sum of square deviations: 1995284605.5913994
[2026-01-08 21:41:51] 2026-01-09 02:41:05,299 | INFO     | sum of deviations: 67870165918.75269
[2026-01-08 21:41:51] 2026-01-09 02:41:05,299 | INFO     | mean x: 1767920114.5698924
[2026-01-08 21:41:51] 2026-01-09 02:41:05,299 | INFO     | mean y: 3530709.134408602
[2026-01-08 21:41:51] 2026-01-09 02:41:05,299 | INFO     | intersect: -60132768228.2266
[2026-01-08 21:41:51] 2026-01-09 02:41:05,299 | INFO     | chi2: 0.010202201488200282
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | current memory leak: 34.02 B/s (using 186 data points, chi2=0.01)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | could have reported an average CPU frequency of 2426 MHz (11 samples)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | ..............................
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | . Timing measurements:
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | . get job = 0 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | . initial setup = 2 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | . payload setup = 7 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,300 | INFO     | . stage-in = 0 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,301 | INFO     | . payload execution = 13206 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,301 | INFO     | . stage-out = 2 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,301 | INFO     | . log creation = 0 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,301 | INFO     | ..............................
[2026-01-08 21:41:51] 2026-01-09 02:41:05,388 | INFO     | 
[2026-01-08 21:41:51] 2026-01-09 02:41:05,388 | INFO     | job summary report
[2026-01-08 21:41:51] 2026-01-09 02:41:05,388 | INFO     | --------------------------------------------------
[2026-01-08 21:41:51] 2026-01-09 02:41:05,389 | INFO     | PanDA job id: 6963078287
[2026-01-08 21:41:51] 2026-01-09 02:41:05,389 | INFO     | task id: 47962010
[2026-01-08 21:41:51] 2026-01-09 02:41:05,389 | INFO     | errors: (none)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,389 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:41:51] 2026-01-09 02:41:05,389 | INFO     | pilot state: finished 
[2026-01-08 21:41:51] 2026-01-09 02:41:05,389 | INFO     | transexitcode: 0
[2026-01-08 21:41:51] 2026-01-09 02:41:05,389 | INFO     | exeerrorcode: 0
[2026-01-08 21:41:51] 2026-01-09 02:41:05,390 | INFO     | exeerrordiag: 
[2026-01-08 21:41:51] 2026-01-09 02:41:05,390 | INFO     | exitcode: 0
[2026-01-08 21:41:51] 2026-01-09 02:41:05,390 | INFO     | exitmsg: OK
[2026-01-08 21:41:51] 2026-01-09 02:41:05,390 | INFO     | cpuconsumptiontime: 148209 s
[2026-01-08 21:41:51] 2026-01-09 02:41:05,390 | INFO     | nevents: 450
[2026-01-08 21:41:51] 2026-01-09 02:41:05,390 | INFO     | neventsw: 0
[2026-01-08 21:41:51] 2026-01-09 02:41:05,391 | INFO     | pid: 11156
[2026-01-08 21:41:51] 2026-01-09 02:41:05,391 | INFO     | pgrp: 11156
[2026-01-08 21:41:51] 2026-01-09 02:41:05,391 | INFO     | corecount: 12
[2026-01-08 21:41:51] 2026-01-09 02:41:05,391 | INFO     | event service: False
[2026-01-08 21:41:51] 2026-01-09 02:41:05,391 | INFO     | sizes: {0: 2284619, 5: 2284881, 11: 2284937, 13217: 2316116, 13220: 2325110, 13221: 2325166, 13226: 2325540}
[2026-01-08 21:41:51] 2026-01-09 02:41:05,391 | INFO     | --------------------------------------------------
[2026-01-08 21:41:51] 2026-01-09 02:41:05,392 | INFO     | 
[2026-01-08 21:41:51] 2026-01-09 02:41:05,392 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 21:41:51] 2026-01-09 02:41:05,416 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,417 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,417 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,417 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,419 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,419 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,420 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,420 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:41:51] 2026-01-09 02:41:05,421 | INFO     | job 6963078287 has completed (purged errors)
[2026-01-08 21:41:51] 2026-01-09 02:41:05,421 | INFO     | overall cleanup function is called
[2026-01-08 21:41:51] 2026-01-09 02:41:06,436 | INFO     | --- collectZombieJob: --- 10, [11156]
[2026-01-08 21:41:51] 2026-01-09 02:41:06,436 | INFO     | zombie collector waiting for pid 11156
[2026-01-08 21:41:51] 2026-01-09 02:41:06,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:41:51] 2026-01-09 02:41:06,436 | INFO     | collected zombie processes
[2026-01-08 21:41:51] 2026-01-09 02:41:06,437 | INFO     | will attempt to kill all subprocesses of pid=11156
[2026-01-08 21:41:51] 2026-01-09 02:41:06,525 | INFO     | process IDs to be killed: [11156] (in reverse order)
[2026-01-08 21:41:51] 2026-01-09 02:41:06,570 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:41:51] 2026-01-09 02:41:06,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:41:51] 2026-01-09 02:41:06,575 | INFO     | did not find any defunct processes belonging to 11156
[2026-01-08 21:41:51] 2026-01-09 02:41:06,577 | INFO     | did not find any defunct processes belonging to 11156
[2026-01-08 21:41:51] 2026-01-09 02:41:06,578 | INFO     | ready for new job
[2026-01-08 21:41:51] 2026-01-09 02:41:06,578 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:41:51] 2026-01-09 02:41:06,580 | INFO     | ***************************************
[2026-01-08 21:41:51] 2026-01-09 02:41:06,580 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:41:51] 2026-01-09 02:41:06,580 | INFO     | ***************************************
[2026-01-08 21:41:51] 2026-01-09 02:41:06,580 | INFO     | 
[2026-01-08 21:41:51] 2026-01-09 02:41:06,581 | INFO     | architecture information:
[2026-01-08 21:41:51] 2026-01-09 02:41:06,582 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:41:51] 2026-01-09 02:41:06,597 | INFO     | cat /etc/os-release:
[2026-01-08 21:41:51] NAME="CentOS Linux"
[2026-01-08 21:41:51] VERSION="7 (Core)"
[2026-01-08 21:41:51] ID="centos"
[2026-01-08 21:41:51] ID_LIKE="rhel fedora"
[2026-01-08 21:41:51] VERSION_ID="7"
[2026-01-08 21:41:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:41:51] ANSI_COLOR="0;31"
[2026-01-08 21:41:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:41:51] HOME_URL="https://www.centos.org/"
[2026-01-08 21:41:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:41:51] 
[2026-01-08 21:41:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:41:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:41:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:41:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:41:51] 
[2026-01-08 21:41:51] 2026-01-09 02:41:06,598 | INFO     | ***************************************
[2026-01-08 21:41:51] 2026-01-09 02:41:07,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 21:41:51] 2026-01-09 02:41:07,117 | INFO     | sufficient remaining disk space (18017681408 B)
[2026-01-08 21:41:51] 2026-01-09 02:41:07,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:41:51] 2026-01-09 02:41:07,118 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:41:51] 2026-01-09 02:41:07,118 | INFO     | update_server=False
[2026-01-08 21:41:51] 2026-01-09 02:41:07,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:41:51] 2026-01-09 02:41:07,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:41:51] 2026-01-09 02:41:07,119 | INFO     | aborting loop
[2026-01-08 21:41:51] 2026-01-09 02:41:07,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:41:51] 2026-01-09 02:41:07,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:41:51] 2026-01-09 02:41:07,226 | INFO     | all data control threads have been joined
[2026-01-08 21:41:51] 2026-01-09 02:41:07,440 | INFO     | all job control threads have been joined
[2026-01-08 21:41:51] 2026-01-09 02:41:07,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:41:51] 2026-01-09 02:41:08,121 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,123 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,125 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,232 | INFO     | [data] control thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,290 | INFO     | all payload control threads have been joined
[2026-01-08 21:41:51] 2026-01-09 02:41:08,445 | INFO     | [job] control thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,476 | INFO     | [job] validate thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,616 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,780 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:08,927 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:09,094 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:09,235 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:09,296 | INFO     | [payload] control thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:09,351 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:09,623 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:11,126 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:17,930 | INFO     | job.realtimelogging is not enabled
[2026-01-08 21:41:51] 2026-01-09 02:41:18,935 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:41:51] 2026-01-09 02:41:36,829 | INFO     | PID=4705 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 21:41:51] 2026-01-09 02:41:36,830 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:41:51] 2026-01-09 02:41:36,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:41:51] 2026-01-09 02:41:36,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:41:51] 2026-01-09 02:41:44,025 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:41:51] 2026-01-09 02:41:45,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702721992512)>', '<ExcThread(monitor, started 140702281344768)>']
[2026-01-08 21:41:51] 2026-01-09 02:41:46,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:41:51] 2026-01-09 02:41:46,879 | INFO     | [monitor] control thread has ended
[2026-01-08 21:41:51] 2026-01-09 02:41:50,984 | INFO     | all workflow threads have been joined
[2026-01-08 21:41:51] 2026-01-09 02:41:50,984 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:41:51] 2026-01-09 02:41:50,984 | INFO     | traces error code: 0
[2026-01-08 21:41:51] 2026-01-09 02:41:50,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:41:51] 2026-01-09 02:41:51,085 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:41:51] 2026-01-09 02:41:51,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:41:51] 2026-01-09 02:41:51,093 [wrapper] pilotpid: 4705
[2026-01-08 21:41:51] 2026-01-09 02:41:51,097 [wrapper] Pilot exit status: 0
[2026-01-08 21:41:51] 2026-01-09 02:41:51,111 [wrapper] pandaids: 6963078287
[2026-01-08 21:41:51] 2026-01-09 02:41:51,156 [wrapper] cleanup supervisor_pilot 16320 4706
[2026-01-08 21:41:51] 2026-01-09 02:41:51,160 [wrapper] Test setup, not cleaning
[2026-01-08 21:41:51] 2026-01-09 02:41:51,164 [wrapper] apfmon messages muted
[2026-01-08 21:41:51] 2026-01-09 02:41:51,168 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:41:51] 2026-01-09 02:41:51,172 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:41:51]  *** Error codes and diagnostics ***
[2026-01-08 21:41:51]     "exeErrorCode": 0,
[2026-01-08 21:41:51]     "exeErrorDiag": "",
[2026-01-08 21:41:51]     "pilotErrorCode": 0,
[2026-01-08 21:41:51]     "pilotErrorDiag": "",
[2026-01-08 21:41:51]  *** Listing of results directory ***
[2026-01-08 21:41:51] total 784584
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 21:41:51] -rwx------ 1 boincer umatlas     36322 Jan  8 06:56 runpilot2-wrapper.sh
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 06:57 queuedata.json
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas       100 Jan  8 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:41:51] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 18:00 run_atlas
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas       105 Jan  8 18:00 job.xml
[2026-01-08 21:41:51] -rw-r--r-- 2 boincer umatlas 394716078 Jan  8 18:00 EVNT.47962006._000049.pool.root.1
[2026-01-08 21:41:51] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:00 start_atlas.sh
[2026-01-08 21:41:51] drwxrwx--x 2 boincer umatlas      4096 Jan  8 18:00 shared
[2026-01-08 21:41:51] -rw-r--r-- 2 boincer umatlas    592611 Jan  8 18:00 input.tar.gz
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas         0 Jan  8 18:00 boinc_lockfile
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas      2890 Jan  8 18:00 pandaJob.out
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas        57 Jan  8 18:00 setup.sh.local
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas    989837 Jan  8 18:00 agis_schedconf.cvmfs.json
[2026-01-08 21:41:51] drwx------ 5 boincer umatlas      4096 Jan  8 18:00 pilot3
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas       533 Jan  8 21:31 boinc_task_state.xml
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas      5956 Jan  8 21:39 init_data.xml
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas 397238852 Jan  8 21:40 HITS.47962010._000424.pool.root.1
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas        95 Jan  8 21:40 pilot_heartbeat.json
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas      1058 Jan  8 21:40 memory_monitor_summary.json
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas   1516240 Jan  8 21:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas   1877669 Jan  8 21:40 log.47962010._000424.job.log.tgz.1
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas      8650 Jan  8 21:41 heartbeat.json
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 21:41 boinc_mmap_file
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas        29 Jan  8 21:41 wrapper_checkpoint.txt
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas      4817 Jan  8 21:41 pilotlog.txt
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas   1888277 Jan  8 21:41 log.47962010._000424.job.log.1
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas       353 Jan  8 21:41 output.list
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas       620 Jan  8 21:41 runtime_log
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas   3788800 Jan  8 21:41 result.tar.gz
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas      9345 Jan  8 21:41 runtime_log.err
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas       669 Jan  8 21:41 eODLDmNo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbHfKDmvK26km.diag
[2026-01-08 21:41:51] -rw-r--r-- 1 boincer umatlas     21288 Jan  8 21:41 stderr.txt
[2026-01-08 21:41:51] HITS file was successfully produced:
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas 397238852 Jan  8 21:40 shared/HITS.pool.root.1
[2026-01-08 21:41:51]  *** Contents of shared directory: ***
[2026-01-08 21:41:51] total 777700
[2026-01-08 21:41:51] -rw-r--r-- 2 boincer umatlas 394716078 Jan  8 18:00 ATLAS.root_0
[2026-01-08 21:41:51] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:00 start_atlas.sh
[2026-01-08 21:41:51] -rw-r--r-- 2 boincer umatlas    592611 Jan  8 18:00 input.tar.gz
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas 397238852 Jan  8 21:40 HITS.pool.root.1
[2026-01-08 21:41:51] -rw------- 1 boincer umatlas   3788800 Jan  8 21:41 result.tar.gz
21:41:52 (859): run_atlas exited; CPU time 145318.959397
21:41:52 (859): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN