Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:27:36 (29468): wrapper (7.7.26015): starting
06:27:36 (29468): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:27:36] Arguments: --nthreads 8
[2026-01-09 06:27:36] Threads: 8
[2026-01-09 06:27:36] Checking for CVMFS
[2026-01-09 06:27:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:27:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:27:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:27:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:27:36] 2.11.2.0 22677 34993 103568 154933 0 56 21997239 25165825 0 130560 0 6729716 99.691 8833549 2573 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:27:36] CVMFS is ok
[2026-01-09 06:27:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:27:36] Checking for apptainer binary...
[2026-01-09 06:27:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:27:36] Running /usr/bin/apptainer --version
[2026-01-09 06:27:36] apptainer version 1.3.2-1.el7
[2026-01-09 06:27:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:27:38] cg-vwn370.simple-grid.lan
[2026-01-09 06:27:38] apptainer works
[2026-01-09 06:27:38] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:27:38] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:27:38] Starting ATLAS job with PandaID=6963076989
[2026-01-09 06:27:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:42:14]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:42:14] 2026-01-09 07:41:35,476 | INFO     | time since job start (8021s) is within the limit (174528.0s)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,231 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 08:42:14] 2026-01-09 07:41:36,232 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 08:42:14] 2026-01-09 07:41:36,234 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963076989/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,235 | INFO     | extracted standard info from prmon json
[2026-01-09 08:42:14] 2026-01-09 07:41:36,235 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:42:14] 2026-01-09 07:41:36,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:42:14] 2026-01-09 07:41:36,238 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:42:14] 2026-01-09 07:41:36,239 | INFO     | sum of square deviations: 697020910.3053433
[2026-01-09 08:42:14] 2026-01-09 07:41:36,240 | INFO     | sum of deviations: 12582620145.343515
[2026-01-09 08:42:14] 2026-01-09 07:41:36,240 | INFO     | mean x: 1767940474.167939
[2026-01-09 08:42:14] 2026-01-09 07:41:36,240 | INFO     | mean y: 2605434.9389312975
[2026-01-09 08:42:14] 2026-01-09 07:41:36,240 | INFO     | intersect: -31912252637.66708
[2026-01-09 08:42:14] 2026-01-09 07:41:36,240 | INFO     | chi2: 3.706445351914976
[2026-01-09 08:42:14] 2026-01-09 07:41:36,241 | INFO     | sum of square deviations: 620216877.6587305
[2026-01-09 08:42:14] 2026-01-09 07:41:36,242 | INFO     | sum of deviations: 35768855738.39684
[2026-01-09 08:42:14] 2026-01-09 07:41:36,242 | INFO     | mean x: 1767940321.6746032
[2026-01-09 08:42:14] 2026-01-09 07:41:36,242 | INFO     | mean y: 2650946.9365079366
[2026-01-09 08:42:14] 2026-01-09 07:41:36,242 | INFO     | intersect: -101957170847.64157
[2026-01-09 08:42:14] 2026-01-09 07:41:36,242 | INFO     | chi2: 2.3198626637369246
[2026-01-09 08:42:14] 2026-01-09 07:41:36,242 | INFO     | current chi2=2.3198626637369246 (change=37.410039985121 %)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,243 | INFO     | sum of square deviations: 549273419.9999993
[2026-01-09 08:42:14] 2026-01-09 07:41:36,244 | INFO     | sum of deviations: 36283982830.90911
[2026-01-09 08:42:14] 2026-01-09 07:41:36,244 | INFO     | mean x: 1767940169.1818182
[2026-01-09 08:42:14] 2026-01-09 07:41:36,244 | INFO     | mean y: 2651941.140495868
[2026-01-09 08:42:14] 2026-01-09 07:41:36,244 | INFO     | intersect: -116784194843.95921
[2026-01-09 08:42:14] 2026-01-09 07:41:36,244 | INFO     | chi2: 2.294005470505877
[2026-01-09 08:42:14] 2026-01-09 07:41:36,244 | INFO     | current chi2=2.294005470505877 (change=1.1146001716065224 %)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,245 | INFO     | right removable region: 120
[2026-01-09 08:42:14] 2026-01-09 07:41:36,245 | INFO     | sum of square deviations: 620203457.6587305
[2026-01-09 08:42:14] 2026-01-09 07:41:36,246 | INFO     | sum of deviations: -17863107362.690475
[2026-01-09 08:42:14] 2026-01-09 07:41:36,246 | INFO     | mean x: 1767940626.6746032
[2026-01-09 08:42:14] 2026-01-09 07:41:36,246 | INFO     | mean y: 2665285.6904761903
[2026-01-09 08:42:14] 2026-01-09 07:41:36,246 | INFO     | intersect: 50922912238.79316
[2026-01-09 08:42:14] 2026-01-09 07:41:36,246 | INFO     | chi2: 1.500446077425667
[2026-01-09 08:42:14] 2026-01-09 07:41:36,247 | INFO     | current chi2=1.500446077425667 (change=59.51792256560737 %)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,247 | INFO     | sum of square deviations: 549261828.6942146
[2026-01-09 08:42:14] 2026-01-09 07:41:36,248 | INFO     | sum of deviations: -21606861155.45454
[2026-01-09 08:42:14] 2026-01-09 07:41:36,248 | INFO     | mean x: 1767940779.1652892
[2026-01-09 08:42:14] 2026-01-09 07:41:36,248 | INFO     | mean y: 2673286.272727273
[2026-01-09 08:42:14] 2026-01-09 07:41:36,248 | INFO     | intersect: 69549925527.16539
[2026-01-09 08:42:14] 2026-01-09 07:41:36,248 | INFO     | chi2: 1.4503919069000708
[2026-01-09 08:42:14] 2026-01-09 07:41:36,249 | INFO     | current chi2=1.4503919069000708 (change=3.335952639595997 %)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,249 | INFO     | left removable region: 20
[2026-01-09 08:42:14] 2026-01-09 07:41:36,249 | INFO     | sum of square deviations: 310041542.1100001
[2026-01-09 08:42:14] 2026-01-09 07:41:36,249 | INFO     | sum of deviations: 711677564.2199998
[2026-01-09 08:42:14] 2026-01-09 07:41:36,250 | INFO     | mean x: 1767940748.67
[2026-01-09 08:42:14] 2026-01-09 07:41:36,250 | INFO     | mean y: 2735724.34
[2026-01-09 08:42:14] 2026-01-09 07:41:36,250 | INFO     | intersect: -4055442277.020697
[2026-01-09 08:42:14] 2026-01-09 07:41:36,250 | INFO     | chi2: 0.01904336217213764
[2026-01-09 08:42:14] 2026-01-09 07:41:36,250 | INFO     | current memory leak: 2.30 B/s (using 100 data points, chi2=0.02)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,251 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,251 | INFO     | ..............................
[2026-01-09 08:42:14] 2026-01-09 07:41:36,251 | INFO     | . Timing measurements:
[2026-01-09 08:42:14] 2026-01-09 07:41:36,251 | INFO     | . get job = 0 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,251 | INFO     | . initial setup = 2 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,251 | INFO     | . payload setup = 9 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,252 | INFO     | . stage-in = 0 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,252 | INFO     | . payload execution = 7983 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,252 | INFO     | . stage-out = 1 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,252 | INFO     | . log creation = 0 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,252 | INFO     | ..............................
[2026-01-09 08:42:14] 2026-01-09 07:41:36,445 | INFO     | 
[2026-01-09 08:42:14] 2026-01-09 07:41:36,445 | INFO     | job summary report
[2026-01-09 08:42:14] 2026-01-09 07:41:36,445 | INFO     | --------------------------------------------------
[2026-01-09 08:42:14] 2026-01-09 07:41:36,445 | INFO     | PanDA job id: 6963076989
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | task id: 47947082
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | errors: (none)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | pilot state: finished 
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | transexitcode: 0
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | exeerrorcode: 0
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | exeerrordiag: 
[2026-01-09 08:42:14] 2026-01-09 07:41:36,446 | INFO     | exitcode: 0
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | exitmsg: OK
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | cpuconsumptiontime: 59368 s
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | nevents: 150
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | neventsw: 0
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | pid: 7230
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | pgrp: 7230
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | corecount: 8
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | event service: False
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | sizes: {0: 2284331, 1: 2284530, 6: 2284792, 12: 2284820, 7997: 2313248, 7999: 2322426, 8004: 2322616}
[2026-01-09 08:42:14] 2026-01-09 07:41:36,447 | INFO     | --------------------------------------------------
[2026-01-09 08:42:14] 2026-01-09 07:41:36,448 | INFO     | 
[2026-01-09 08:42:14] 2026-01-09 07:41:36,448 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 08:42:14] 2026-01-09 07:41:36,473 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,473 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,473 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,473 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,475 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:42:14] 2026-01-09 07:41:36,475 | INFO     | job 6963076989 has completed (purged errors)
[2026-01-09 08:42:14] 2026-01-09 07:41:36,475 | INFO     | overall cleanup function is called
[2026-01-09 08:42:14] 2026-01-09 07:41:36,559 | INFO     | PID=785 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-09 08:42:14] 2026-01-09 07:41:37,496 | INFO     | --- collectZombieJob: --- 10, [7230]
[2026-01-09 08:42:14] 2026-01-09 07:41:37,497 | INFO     | zombie collector waiting for pid 7230
[2026-01-09 08:42:14] 2026-01-09 07:41:37,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:42:14] 2026-01-09 07:41:37,497 | INFO     | collected zombie processes
[2026-01-09 08:42:14] 2026-01-09 07:41:37,497 | INFO     | will attempt to kill all subprocesses of pid=7230
[2026-01-09 08:42:14] 2026-01-09 07:41:37,558 | INFO     | process IDs to be killed: [7230] (in reverse order)
[2026-01-09 08:42:14] 2026-01-09 07:41:37,628 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:42:14] 2026-01-09 07:41:37,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:42:14] 2026-01-09 07:41:37,630 | INFO     | did not find any defunct processes belonging to 7230
[2026-01-09 08:42:14] 2026-01-09 07:41:37,632 | INFO     | did not find any defunct processes belonging to 7230
[2026-01-09 08:42:14] 2026-01-09 07:41:37,632 | INFO     | ready for new job
[2026-01-09 08:42:14] 2026-01-09 07:41:37,632 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:42:14] 2026-01-09 07:41:37,634 | INFO     | ***************************************
[2026-01-09 08:42:14] 2026-01-09 07:41:37,634 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:42:14] 2026-01-09 07:41:37,634 | INFO     | ***************************************
[2026-01-09 08:42:14] 2026-01-09 07:41:37,634 | INFO     | 
[2026-01-09 08:42:14] 2026-01-09 07:41:37,635 | INFO     | pilot is running in a VM
[2026-01-09 08:42:14] 2026-01-09 07:41:37,635 | INFO     | architecture information:
[2026-01-09 08:42:14] 2026-01-09 07:41:37,636 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:42:14] 2026-01-09 07:41:37,655 | INFO     | cat /etc/os-release:
[2026-01-09 08:42:14] NAME="CentOS Linux"
[2026-01-09 08:42:14] VERSION="7 (Core)"
[2026-01-09 08:42:14] ID="centos"
[2026-01-09 08:42:14] ID_LIKE="rhel fedora"
[2026-01-09 08:42:14] VERSION_ID="7"
[2026-01-09 08:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:42:14] ANSI_COLOR="0;31"
[2026-01-09 08:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:42:14] HOME_URL="https://www.centos.org/"
[2026-01-09 08:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:42:14] 
[2026-01-09 08:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:42:14] 
[2026-01-09 08:42:14] 2026-01-09 07:41:37,656 | INFO     | ***************************************
[2026-01-09 08:42:14] 2026-01-09 07:41:38,159 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 08:42:14] 2026-01-09 07:41:38,177 | INFO     | sufficient remaining disk space (497821941760 B)
[2026-01-09 08:42:14] 2026-01-09 07:41:38,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:42:14] 2026-01-09 07:41:38,178 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:42:14] 2026-01-09 07:41:38,178 | INFO     | update_server=False
[2026-01-09 08:42:14] 2026-01-09 07:41:38,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:42:14] 2026-01-09 07:41:38,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:42:14] 2026-01-09 07:41:38,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:42:14] 2026-01-09 07:41:38,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:42:14] 2026-01-09 07:41:38,180 | INFO     | aborting loop
[2026-01-09 08:42:14] 2026-01-09 07:41:38,790 | INFO     | all data control threads have been joined
[2026-01-09 08:42:14] 2026-01-09 07:41:39,182 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:39,185 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:39,185 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:39,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:42:14] 2026-01-09 07:41:39,392 | INFO     | all payload control threads have been joined
[2026-01-09 08:42:14] 2026-01-09 07:41:39,492 | INFO     | all job control threads have been joined
[2026-01-09 08:42:14] 2026-01-09 07:41:39,645 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:39,795 | INFO     | [data] control thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:39,837 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:39,949 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:40,094 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:40,113 | INFO     | [job] validate thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:40,398 | INFO     | [payload] control thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:40,434 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:40,498 | INFO     | [job] control thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:40,555 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:41,221 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:42,185 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:41:48,739 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:42:14] 2026-01-09 07:41:49,744 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:42:14] 2026-01-09 07:42:06,783 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:42:14] 2026-01-09 07:42:07,574 | INFO     | 8025s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 08:42:14] 2026-01-09 07:42:08,656 | INFO     | PID=785 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-09 08:42:14] 2026-01-09 07:42:08,657 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:42:14] 2026-01-09 07:42:08,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:42:14] 2026-01-09 07:42:08,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:42:14] 2026-01-09 07:42:08,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139790915392)>', '<ExcThread(monitor, started 140139078612736)>']
[2026-01-09 08:42:14] 2026-01-09 07:42:09,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:42:14] 2026-01-09 07:42:09,662 | INFO     | [monitor] control thread has ended
[2026-01-09 08:42:14] 2026-01-09 07:42:13,762 | INFO     | all workflow threads have been joined
[2026-01-09 08:42:14] 2026-01-09 07:42:13,762 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:42:14] 2026-01-09 07:42:13,763 | INFO     | traces error code: 0
[2026-01-09 08:42:14] 2026-01-09 07:42:13,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:42:14] 2026-01-09 07:42:13,903 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:42:14] 2026-01-09 07:42:13,906 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:42:14] 2026-01-09 07:42:13,911 [wrapper] pilotpid: 785
[2026-01-09 08:42:14] 2026-01-09 07:42:13,915 [wrapper] Pilot exit status: 0
[2026-01-09 08:42:14] 2026-01-09 07:42:13,933 [wrapper] pandaids: 6963076989
[2026-01-09 08:42:14] 2026-01-09 07:42:13,964 [wrapper] cleanup supervisor_pilot 21976 786
[2026-01-09 08:42:14] 2026-01-09 07:42:13,968 [wrapper] Test setup, not cleaning
[2026-01-09 08:42:14] 2026-01-09 07:42:13,974 [wrapper] apfmon messages muted
[2026-01-09 08:42:14] 2026-01-09 07:42:13,979 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:42:14] 2026-01-09 07:42:13,983 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:42:14]  *** Error codes and diagnostics ***
[2026-01-09 08:42:14]     "exeErrorCode": 0,
[2026-01-09 08:42:14]     "exeErrorDiag": "",
[2026-01-09 08:42:14]     "pilotErrorCode": 0,
[2026-01-09 08:42:14]     "pilotErrorDiag": "",
[2026-01-09 08:42:14]  *** Listing of results directory ***
[2026-01-09 08:42:14] total 554032
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 08:42:14] -rwx------. 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:57 queuedata.json
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:42:14] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:27 run_atlas
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:27 job.xml
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc      6390 Jan  9 06:27 init_data.xml
[2026-01-09 08:42:14] -rw-r--r--. 2 boinc boinc 413284740 Jan  9 06:27 EVNT.47947080._000142.pool.root.1
[2026-01-09 08:42:14] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:27 start_atlas.sh
[2026-01-09 08:42:14] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:27 shared
[2026-01-09 08:42:14] -rw-r--r--. 2 boinc boinc    592616 Jan  9 06:27 input.tar.gz
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:27 boinc_lockfile
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc      2877 Jan  9 06:27 pandaJob.out
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc    989771 Jan  9 06:27 agis_schedconf.cvmfs.json
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc   1516240 Jan  9 06:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:42:14] drwx------. 5 boinc boinc      4096 Jan  9 06:27 pilot3
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc       529 Jan  9 08:33 boinc_task_state.xml
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc 145354416 Jan  9 08:41 HITS.47947082._005248.pool.root.1
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc      1018 Jan  9 08:41 memory_monitor_summary.json
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc   1286067 Jan  9 08:41 log.47947082._005248.job.log.tgz.1
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc        95 Jan  9 08:41 pilot_heartbeat.json
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc      8609 Jan  9 08:41 heartbeat.json
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:42 boinc_mmap_file
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc        27 Jan  9 08:42 wrapper_checkpoint.txt
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc      4994 Jan  9 08:42 pilotlog.txt
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc   1106584 Jan  9 08:42 log.47947082._005248.job.log.1
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc       353 Jan  9 08:42 output.list
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:42 runtime_log
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc   2416640 Jan  9 08:42 result.tar.gz
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc      8816 Jan  9 08:42 runtime_log.err
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc       654 Jan  9 08:42 HElKDmOo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXVkKDm0p9fgn.diag
[2026-01-09 08:42:14] -rw-r--r--. 1 boinc boinc     20902 Jan  9 08:42 stderr.txt
[2026-01-09 08:42:14] HITS file was successfully produced:
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc 145354416 Jan  9 08:41 shared/HITS.pool.root.1
[2026-01-09 08:42:14]  *** Contents of shared directory: ***
[2026-01-09 08:42:14] total 548504
[2026-01-09 08:42:14] -rw-r--r--. 2 boinc boinc 413284740 Jan  9 06:27 ATLAS.root_0
[2026-01-09 08:42:14] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:27 start_atlas.sh
[2026-01-09 08:42:14] -rw-r--r--. 2 boinc boinc    592616 Jan  9 06:27 input.tar.gz
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc 145354416 Jan  9 08:41 HITS.pool.root.1
[2026-01-09 08:42:14] -rw-------. 1 boinc boinc   2416640 Jan  9 08:42 result.tar.gz
08:42:15 (29468): run_atlas exited; CPU time 59343.069979
08:42:15 (29468): called boinc_finish(0)

</stderr_txt>
]]>

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