Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:21:48 (4061993): wrapper (7.7.26015): starting
06:21:48 (4061993): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 06:21:48] Arguments: --nthreads 3
[2026-01-09 06:21:48] Threads: 3
[2026-01-09 06:21:48] Checking for CVMFS
[2026-01-09 06:21:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:21:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:21:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:21:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:21:48] 2.9.2.0 3607278 1877 76012 154933 3 56 15847343 36864001 0 130560 0 1151220 99.986 77049 5377 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 06:21:48] CVMFS is ok
[2026-01-09 06:21:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:21:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:21:48] Further information can be found at the LHC@home message board.
[2026-01-09 06:21:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:21:48] Checking for apptainer binary...
[2026-01-09 06:21:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:21:48] Running /usr/bin/apptainer --version
[2026-01-09 06:21:48] apptainer version 1.4.1-1.1
[2026-01-09 06:21:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:21:48] thA312
[2026-01-09 06:21:48] apptainer works
[2026-01-09 06:21:48] Set ATHENA_PROC_NUMBER=3
[2026-01-09 06:21:48] Set ATHENA_CORE_NUMBER=3
[2026-01-09 06:21:48] Starting ATLAS job with PandaID=6963077789
[2026-01-09 06:21:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:50:33]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:50:33] 2026-01-09 09:50:03,764 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:03,868 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:04,194 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:04,266 | INFO     | [data] control thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:04,405 | INFO     | [job] control thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:04,470 | INFO     | [payload] control thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:04,602 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:04,734 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:04,914 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:05,120 | INFO     | [job] validate thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:05,264 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:05,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:50:33] 2026-01-09 09:50:06,608 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:06,735 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:12,700 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:50:33] 2026-01-09 09:50:13,379 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:50:33] 2026-01-09 09:50:14,384 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:50:33] 2026-01-09 09:50:14,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972731537216)>', '<ExcThread(monitor, started 139972094973696)>']
[2026-01-09 10:50:33] 2026-01-09 09:50:19,622 | INFO     | all workflow threads have been joined
[2026-01-09 10:50:33] 2026-01-09 09:50:19,622 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:50:33] 2026-01-09 09:50:19,622 | INFO     | traces error code: 0
[2026-01-09 10:50:33] 2026-01-09 09:50:19,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:50:33] 2026-01-09 09:50:33,502 | INFO     | PID=4065717 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:50:33] 2026-01-09 09:50:33,502 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:50:33] 2026-01-09 09:50:33,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:50:33] 2026-01-09 09:50:33,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:50:33] 2026-01-09 09:50:33,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:50:33] 2026-01-09 09:50:33,503 | INFO     | [monitor] control thread has ended
[2026-01-09 10:50:33] 2026-01-09 09:50:33,551 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:50:33] 2026-01-09 09:50:33,554 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:50:33] 2026-01-09 09:50:33,556 [wrapper] pilotpid: 4065717
[2026-01-09 10:50:33] 2026-01-09 09:50:33,558 [wrapper] Pilot exit status: 0
[2026-01-09 10:50:33] 2026-01-09 09:50:33,565 [wrapper] pandaids: 6963077789
[2026-01-09 10:50:33] 2026-01-09 09:50:33,583 [wrapper] cleanup supervisor_pilot 4105675 4065718
[2026-01-09 10:50:33] 2026-01-09 09:50:33,585 [wrapper] Test setup, not cleaning
[2026-01-09 10:50:33] 2026-01-09 09:50:33,588 [wrapper] apfmon messages muted
[2026-01-09 10:50:33] 2026-01-09 09:50:33,590 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:50:33] 2026-01-09 09:50:33,592 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:50:33]  *** Error codes and diagnostics ***
[2026-01-09 10:50:33]     "exeErrorCode": 0,
[2026-01-09 10:50:33]     "exeErrorDiag": "",
[2026-01-09 10:50:33]     "pilotErrorCode": 0,
[2026-01-09 10:50:33]     "pilotErrorDiag": "",
[2026-01-09 10:50:33]  *** Listing of results directory ***
[2026-01-09 10:50:33] total 784324
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 10:50:33] -rwx------ 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:57 queuedata.json
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc       100 Jan  9 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:50:33] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 06:21 run_atlas
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc       105 Jan  9 06:21 job.xml
[2026-01-09 10:50:33] -rw-r--r-- 2 boinc boinc 394279427 Jan  9 06:21 EVNT.47962006._000043.pool.root.1
[2026-01-09 10:50:33] -rw-r--r-- 2 boinc boinc    592611 Jan  9 06:21 input.tar.gz
[2026-01-09 10:50:33] -rw-r--r-- 2 boinc boinc     15847 Jan  9 06:21 start_atlas.sh
[2026-01-09 10:50:33] drwxrwx--x 2 boinc boinc      4096 Jan  9 06:21 shared
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc         0 Jan  9 06:21 boinc_setup_complete
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc      6439 Jan  9 06:21 init_data.xml
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc         0 Jan  9 06:21 boinc_lockfile
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc      2890 Jan  9 06:21 pandaJob.out
[2026-01-09 10:50:33] -rw------- 1 boinc boinc    989771 Jan  9 06:21 agis_schedconf.cvmfs.json
[2026-01-09 10:50:33] drwx------ 5 boinc boinc      4096 Jan  9 06:21 pilot3
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc       531 Jan  9 10:46 boinc_task_state.xml
[2026-01-09 10:50:33] -rw------- 1 boinc boinc 398598009 Jan  9 10:49 HITS.47962010._000287.pool.root.1
[2026-01-09 10:50:33] -rw------- 1 boinc boinc      1019 Jan  9 10:49 memory_monitor_summary.json
[2026-01-09 10:50:33] -rw------- 1 boinc boinc   1516240 Jan  9 10:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:50:33] -rw------- 1 boinc boinc    902839 Jan  9 10:49 log.47962010._000287.job.log.tgz.1
[2026-01-09 10:50:33] -rw------- 1 boinc boinc      8551 Jan  9 10:50 heartbeat.json
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc        28 Jan  9 10:50 wrapper_checkpoint.txt
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc      8192 Jan  9 10:50 boinc_mmap_file
[2026-01-09 10:50:33] -rw------- 1 boinc boinc       747 Jan  9 10:50 pilotlog.txt
[2026-01-09 10:50:33] -rw------- 1 boinc boinc        95 Jan  9 10:50 pilot_heartbeat.json
[2026-01-09 10:50:33] -rw------- 1 boinc boinc   2281538 Jan  9 10:50 log.47962010._000287.job.log.1
[2026-01-09 10:50:33] -rw------- 1 boinc boinc       353 Jan  9 10:50 output.list
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc       620 Jan  9 10:50 runtime_log
[2026-01-09 10:50:33] -rw------- 1 boinc boinc   3205120 Jan  9 10:50 result.tar.gz
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc      8898 Jan  9 10:50 runtime_log.err
[2026-01-09 10:50:33] -rw------- 1 boinc boinc       665 Jan  9 10:50 g6pNDmBo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpUkKDmEjhYen.diag
[2026-01-09 10:50:33] -rw-r--r-- 1 boinc boinc      6330 Jan  9 10:50 stderr.txt
[2026-01-09 10:50:33] HITS file was successfully produced:
[2026-01-09 10:50:33] -rw------- 1 boinc boinc 398598009 Jan  9 10:49 shared/HITS.pool.root.1
[2026-01-09 10:50:33]  *** Contents of shared directory: ***
[2026-01-09 10:50:33] total 778032
[2026-01-09 10:50:33] -rw-r--r-- 2 boinc boinc 394279427 Jan  9 06:21 ATLAS.root_0
[2026-01-09 10:50:33] -rw-r--r-- 2 boinc boinc    592611 Jan  9 06:21 input.tar.gz
[2026-01-09 10:50:33] -rw-r--r-- 2 boinc boinc     15847 Jan  9 06:21 start_atlas.sh
[2026-01-09 10:50:33] -rw------- 1 boinc boinc 398598009 Jan  9 10:49 HITS.pool.root.1
[2026-01-09 10:50:33] -rw------- 1 boinc boinc   3205120 Jan  9 10:50 result.tar.gz
10:50:35 (4061993): run_atlas exited; CPU time 46872.870583
10:50:35 (4061993): called boinc_finish(0)

</stderr_txt>
]]>

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