Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:47 (2603191): wrapper (7.7.26015): starting
17:53:47 (2603191): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 17:53:47] Arguments: --nthreads 8
[2026-01-08 17:53:47] Threads: 8
[2026-01-08 17:53:47] Checking for CVMFS
[2026-01-08 17:53:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:53:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:53:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:53:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:53:47] 2.13.3.0 11323 92596 331120 154922 3 388 20505987 32935936 14956 16776704 0 310557873 99.419 487324394 40029 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 17:53:47] CVMFS is ok
[2026-01-08 17:53:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 17:53:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 17:53:47] Further information can be found at the LHC@home message board.
[2026-01-08 17:53:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:53:47] Checking for apptainer binary...
[2026-01-08 17:53:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:53:47] Running /usr/bin/apptainer --version
[2026-01-08 17:53:47] apptainer version 1.4.5-2.el9
[2026-01-08 17:53:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:53:48] c6-4-5-3.aglt2.org
[2026-01-08 17:53:48] apptainer works
[2026-01-08 17:53:48] Set ATHENA_PROC_NUMBER=8
[2026-01-08 17:53:48] Set ATHENA_CORE_NUMBER=8
[2026-01-08 17:53:48] Starting ATLAS job with PandaID=6963078247
[2026-01-08 17:53:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:12:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:12:13] 2026-01-09 17:11:09,231 | INFO     | time since job start (65828s) is within the limit (174528.0s)
[2026-01-09 12:12:13] 2026-01-09 17:11:10,294 | INFO     | monitor loop #3713: job 0:6963078247 is in state 'finished'
[2026-01-09 12:12:13] 2026-01-09 17:11:10,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:12:13] 2026-01-09 17:11:11,241 | INFO     | time since job start (65830s) is within the limit (174528.0s)
[2026-01-09 12:12:13] 2026-01-09 17:11:12,799 | INFO     | monitor loop #3714: job 0:6963078247 is in state 'finished'
[2026-01-09 12:12:13] 2026-01-09 17:11:12,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:12:13] 2026-01-09 17:11:13,248 | INFO     | time since job start (65832s) is within the limit (174528.0s)
[2026-01-09 12:12:13] 2026-01-09 17:11:15,255 | INFO     | time since job start (65834s) is within the limit (174528.0s)
[2026-01-09 12:12:13] 2026-01-09 17:11:15,304 | INFO     | monitor loop #3715: job 0:6963078247 is in state 'finished'
[2026-01-09 12:12:13] 2026-01-09 17:11:15,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:12:13] 2026-01-09 17:11:17,262 | INFO     | time since job start (65836s) is within the limit (174528.0s)
[2026-01-09 12:12:13] 2026-01-09 17:11:17,816 | INFO     | monitor loop #3716: job 0:6963078247 is in state 'finished'
[2026-01-09 12:12:13] 2026-01-09 17:11:17,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:12:13] 2026-01-09 17:11:17,871 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 12:12:13] 2026-01-09 17:11:17,874 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2972.7867187499987
[2026-01-09 12:12:13] 2026-01-09 17:11:17,976 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963078247/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:12:13] 2026-01-09 17:11:17,977 | INFO     | extracted standard info from prmon json
[2026-01-09 12:12:13] 2026-01-09 17:11:17,977 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:12:13] 2026-01-09 17:11:17,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:12:13] 2026-01-09 17:11:18,118 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:12:13] 2026-01-09 17:11:18,120 | INFO     | sum of square deviations: 388433712394.2265
[2026-01-09 12:12:13] 2026-01-09 17:11:18,285 | INFO     | sum of deviations: 1064634966379.8766
[2026-01-09 12:12:13] 2026-01-09 17:11:18,285 | INFO     | mean x: 1767945724.6808906
[2026-01-09 12:12:13] 2026-01-09 17:11:18,285 | INFO     | mean y: 2867049.8775510206
[2026-01-09 12:12:13] 2026-01-09 17:11:18,285 | INFO     | intersect: -4842790721.574582
[2026-01-09 12:12:13] 2026-01-09 17:11:18,317 | INFO     | chi2: 15.524767636967931
[2026-01-09 12:12:13] 2026-01-09 17:11:18,318 | INFO     | sum of square deviations: 383055174009.7092
[2026-01-09 12:12:13] 2026-01-09 17:11:18,488 | INFO     | sum of deviations: 1382818711339.7363
[2026-01-09 12:12:13] 2026-01-09 17:11:18,488 | INFO     | mean x: 1767945572.2031686
[2026-01-09 12:12:13] 2026-01-09 17:11:18,488 | INFO     | mean y: 2876070.253494874
[2026-01-09 12:12:13] 2026-01-09 17:11:18,488 | INFO     | intersect: -6379359136.967101
[2026-01-09 12:12:13] 2026-01-09 17:11:18,489 | INFO     | chi2: 12.906140973213894
[2026-01-09 12:12:13] 2026-01-09 17:11:18,490 | INFO     | current chi2=12.906140973213894 (change=16.86741293002353 %)
[2026-01-09 12:12:13] 2026-01-09 17:11:18,522 | INFO     | right removable region: 1072
[2026-01-09 12:12:13] 2026-01-09 17:11:18,523 | INFO     | sum of square deviations: 383051898656.893
[2026-01-09 12:12:13] 2026-01-09 17:11:18,771 | INFO     | sum of deviations: 734311893939.3287
[2026-01-09 12:12:13] 2026-01-09 17:11:18,771 | INFO     | mean x: 1767945877.2050326
[2026-01-09 12:12:13] 2026-01-09 17:11:18,771 | INFO     | mean y: 2876405.7166821994
[2026-01-09 12:12:13] 2026-01-09 17:11:18,771 | INFO     | intersect: -3386282321.924815
[2026-01-09 12:12:13] 2026-01-09 17:11:18,850 | INFO     | chi2: 13.074453834829818
[2026-01-09 12:12:13] 2026-01-09 17:11:18,850 | INFO     | current chi2=13.074453834829818 (change=15.78325588785864 %)
[2026-01-09 12:12:13] 2026-01-09 17:11:18,850 | INFO     | left removable region: 10
[2026-01-09 12:12:13] 2026-01-09 17:11:18,851 | INFO     | sum of square deviations: 371391605348.3726
[2026-01-09 12:12:13] 2026-01-09 17:11:19,262 | INFO     | sum of deviations: 1038403888815.1877
[2026-01-09 12:12:13] 2026-01-09 17:11:19,376 | INFO     | mean x: 1767945846.7514124
[2026-01-09 12:12:13] 2026-01-09 17:11:19,376 | INFO     | mean y: 2889607.0423728814
[2026-01-09 12:12:13] 2026-01-09 17:11:19,376 | INFO     | intersect: -4940253469.00877
[2026-01-09 12:12:13] 2026-01-09 17:11:19,377 | INFO     | chi2: 9.844177565779027
[2026-01-09 12:12:13] 2026-01-09 17:11:19,378 | INFO     | current memory leak: 2.80 B/s (using 1062 data points, chi2=9.84)
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | could have reported an average CPU frequency of 2983 MHz (39 samples)
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | ..............................
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . Timing measurements:
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . get job = 0 s
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . initial setup = 3 s
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . payload setup = 7 s
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . stage-in = 0 s
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . payload execution = 65752 s
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . stage-out = 14 s
[2026-01-09 12:12:13] 2026-01-09 17:11:19,379 | INFO     | . log creation = 5 s
[2026-01-09 12:12:13] 2026-01-09 17:11:19,380 | INFO     | ..............................
[2026-01-09 12:12:13] 2026-01-09 17:11:19,284 | INFO     | time since job start (65838s) is within the limit (174528.0s)
[2026-01-09 12:12:13] 2026-01-09 17:11:20,283 | INFO     | 
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | job summary report
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | --------------------------------------------------
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | PanDA job id: 6963078247
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | task id: 47962010
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | errors: (none)
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | pilot state: finished 
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | transexitcode: 0
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | exeerrorcode: 0
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | exeerrordiag: 
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | exitcode: 0
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | exitmsg: OK
[2026-01-09 12:12:13] 2026-01-09 17:11:20,284 | INFO     | cpuconsumptiontime: 130362 s
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | nevents: 450
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | neventsw: 0
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | pid: 2613582
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | pgrp: 2613582
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | corecount: 8
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | event service: False
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | sizes: {0: 2284392, 1: 2284647, 5: 2284909, 12: 2284965, 65764: 2340000, 65779: 2348994, 65781: 2349178, 65822: 2349424}
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | --------------------------------------------------
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | 
[2026-01-09 12:12:13] 2026-01-09 17:11:20,285 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 12:12:13] 2026-01-09 17:11:20,462 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,462 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | job 6963078247 has completed (purged errors)
[2026-01-09 12:12:13] 2026-01-09 17:11:20,464 | INFO     | overall cleanup function is called
[2026-01-09 12:12:13] 2026-01-09 17:11:21,523 | INFO     | --- collectZombieJob: --- 10, [2613582]
[2026-01-09 12:12:13] 2026-01-09 17:11:21,523 | INFO     | zombie collector waiting for pid 2613582
[2026-01-09 12:12:13] 2026-01-09 17:11:21,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:12:13] 2026-01-09 17:11:21,523 | INFO     | collected zombie processes
[2026-01-09 12:12:13] 2026-01-09 17:11:21,527 | INFO     | will attempt to kill all subprocesses of pid=2613582
[2026-01-09 12:12:13] 2026-01-09 17:11:22,778 | INFO     | PID=2607099 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:12:13] 2026-01-09 17:11:22,779 | INFO     | .. there are 25 such processes running
[2026-01-09 12:12:13] 2026-01-09 17:11:23,310 | INFO     | process IDs to be killed: [2613582] (in reverse order)
[2026-01-09 12:12:13] 2026-01-09 17:11:24,231 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:12:13] 2026-01-09 17:11:24,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:12:13] 2026-01-09 17:11:24,374 | INFO     | did not find any defunct processes belonging to 2613582
[2026-01-09 12:12:13] 2026-01-09 17:11:24,428 | INFO     | did not find any defunct processes belonging to 2613582
[2026-01-09 12:12:13] 2026-01-09 17:11:24,428 | INFO     | ready for new job
[2026-01-09 12:12:13] 2026-01-09 17:11:24,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:12:13] 2026-01-09 17:11:24,438 | INFO     | ***************************************
[2026-01-09 12:12:13] 2026-01-09 17:11:24,438 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:12:13] 2026-01-09 17:11:24,438 | INFO     | ***************************************
[2026-01-09 12:12:13] 2026-01-09 17:11:24,439 | INFO     | 
[2026-01-09 12:12:13] 2026-01-09 17:11:24,446 | INFO     | architecture information:
[2026-01-09 12:12:13] 2026-01-09 17:11:24,450 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:12:13] 2026-01-09 17:11:24,558 | INFO     | cat /etc/os-release:
[2026-01-09 12:12:13] NAME="CentOS Linux"
[2026-01-09 12:12:13] VERSION="7 (Core)"
[2026-01-09 12:12:13] ID="centos"
[2026-01-09 12:12:13] ID_LIKE="rhel fedora"
[2026-01-09 12:12:13] VERSION_ID="7"
[2026-01-09 12:12:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:12:13] ANSI_COLOR="0;31"
[2026-01-09 12:12:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:12:13] HOME_URL="https://www.centos.org/"
[2026-01-09 12:12:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:12:13] 
[2026-01-09 12:12:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:12:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:12:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:12:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:12:13] 
[2026-01-09 12:12:13] 2026-01-09 17:11:24,558 | INFO     | ***************************************
[2026-01-09 12:12:13] 2026-01-09 17:11:25,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 12:12:13] 2026-01-09 17:11:25,229 | INFO     | sufficient remaining disk space (74488741888 B)
[2026-01-09 12:12:13] 2026-01-09 17:11:25,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:12:13] 2026-01-09 17:11:25,229 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:12:13] 2026-01-09 17:11:25,230 | INFO     | update_server=False
[2026-01-09 12:12:13] 2026-01-09 17:11:25,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:12:13] 2026-01-09 17:11:25,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:12:13] 2026-01-09 17:11:25,452 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:12:13] 2026-01-09 17:11:25,452 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:12:13] 2026-01-09 17:11:25,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:12:13] 2026-01-09 17:11:25,452 | INFO     | will abort loop
[2026-01-09 12:12:13] 2026-01-09 17:11:25,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:12:13] 2026-01-09 17:11:25,684 | INFO     | all job control threads have been joined
[2026-01-09 12:12:13] 2026-01-09 17:11:25,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:12:13] 2026-01-09 17:11:25,746 | INFO     | all data control threads have been joined
[2026-01-09 12:12:13] 2026-01-09 17:11:26,236 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,259 | INFO     | all payload control threads have been joined
[2026-01-09 12:12:13] 2026-01-09 17:11:26,375 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,458 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,605 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,690 | INFO     | [job] control thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,734 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,734 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:26,751 | INFO     | [data] control thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:27,223 | INFO     | [job] validate thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:27,223 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:27,265 | INFO     | [payload] control thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:27,554 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:27,577 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:27,763 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:11:29,752 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:12:13] 2026-01-09 17:12:00,504 | INFO     | PID=2607099 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:12:13] 2026-01-09 17:12:00,504 | INFO     | .. there are 25 such processes running
[2026-01-09 12:12:13] 2026-01-09 17:12:00,504 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:12:13] 2026-01-09 17:12:00,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:12:13] 2026-01-09 17:12:00,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:12:13] 2026-01-09 17:12:04,577 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:12:13] 2026-01-09 17:12:05,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140283469948736)>', '<ExcThread(monitor, started 140282758690560)>']
[2026-01-09 12:12:13] 2026-01-09 17:12:05,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:12:13] 2026-01-09 17:12:05,627 | INFO     | [monitor] control thread has ended
[2026-01-09 12:12:13] 2026-01-09 17:12:10,610 | INFO     | all workflow threads have been joined
[2026-01-09 12:12:13] 2026-01-09 17:12:10,610 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:12:13] 2026-01-09 17:12:10,610 | INFO     | traces error code: 0
[2026-01-09 12:12:13] 2026-01-09 17:12:10,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:12:13] 2026-01-09 17:12:12,182 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:12:13] 2026-01-09 17:12:12,243 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:12:13] 2026-01-09 17:12:12,277 [wrapper] pilotpid: 2607099
[2026-01-09 12:12:13] 2026-01-09 17:12:12,298 [wrapper] Pilot exit status: 0
[2026-01-09 12:12:13] 2026-01-09 17:12:12,352 [wrapper] pandaids: 6963078247
[2026-01-09 12:12:13] 2026-01-09 17:12:12,458 [wrapper] cleanup supervisor_pilot 2429362 2607100
[2026-01-09 12:12:13] 2026-01-09 17:12:12,460 [wrapper] Test setup, not cleaning
[2026-01-09 12:12:13] 2026-01-09 17:12:12,466 [wrapper] apfmon messages muted
[2026-01-09 12:12:13] 2026-01-09 17:12:12,481 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:12:13] 2026-01-09 17:12:12,496 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:12:13]  *** Error codes and diagnostics ***
[2026-01-09 12:12:13]     "exeErrorCode": 0,
[2026-01-09 12:12:13]     "exeErrorDiag": "",
[2026-01-09 12:12:13]     "pilotErrorCode": 0,
[2026-01-09 12:12:13]     "pilotErrorDiag": "",
[2026-01-09 12:12:13]  *** Listing of results directory ***
[2026-01-09 12:12:13] total 788884
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-09 12:12:13] -rwx------. 1 boincer umatlas     36322 Jan  8 06:56 runpilot2-wrapper.sh
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:57 queuedata.json
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas       100 Jan  8 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:12:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 17:53 run_atlas
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas       105 Jan  8 17:53 job.xml
[2026-01-09 12:12:13] -rw-r--r--. 2 boincer umatlas 392712777 Jan  8 17:53 EVNT.47962006._000047.pool.root.1
[2026-01-09 12:12:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 17:53 start_atlas.sh
[2026-01-09 12:12:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 17:53 shared
[2026-01-09 12:12:13] -rw-r--r--. 2 boincer umatlas    592610 Jan  8 17:53 input.tar.gz
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas         0 Jan  8 17:53 boinc_lockfile
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas      2890 Jan  8 17:53 pandaJob.out
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas        57 Jan  8 17:53 setup.sh.local
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas    989837 Jan  8 17:53 agis_schedconf.cvmfs.json
[2026-01-09 12:12:13] drwx------. 5 boincer umatlas      4096 Jan  8 17:54 pilot3
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas       533 Jan  9 11:41 boinc_task_state.xml
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas 391205900 Jan  9 12:09 HITS.47962010._000384.pool.root.1
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas      1067 Jan  9 12:10 memory_monitor_summary.json
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:10 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas   2010289 Jan  9 12:10 log.47962010._000384.job.log.tgz.1
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas      8614 Jan  9 12:11 heartbeat.json
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas        95 Jan  9 12:12 pilot_heartbeat.json
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas      6877 Jan  9 12:12 init_data.xml
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas      5010 Jan  9 12:12 pilotlog.txt
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas   7979326 Jan  9 12:12 log.47962010._000384.job.log.1
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas       353 Jan  9 12:12 output.list
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:12 boinc_mmap_file
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas        29 Jan  9 12:12 wrapper_checkpoint.txt
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:12 runtime_log
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas  10004480 Jan  9 12:12 result.tar.gz
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 12:12 runtime_log.err
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas       660 Jan  9 12:12 qhNKDmNo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzGfKDmBTn5Zm.diag
[2026-01-09 12:12:13] -rw-r--r--. 1 boincer umatlas     21723 Jan  9 12:12 stderr.txt
[2026-01-09 12:12:13] HITS file was successfully produced:
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas 391205900 Jan  9 12:09 shared/HITS.pool.root.1
[2026-01-09 12:12:13]  *** Contents of shared directory: ***
[2026-01-09 12:12:13] total 775924
[2026-01-09 12:12:13] -rw-r--r--. 2 boincer umatlas 392712777 Jan  8 17:53 ATLAS.root_0
[2026-01-09 12:12:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 17:53 start_atlas.sh
[2026-01-09 12:12:13] -rw-r--r--. 2 boincer umatlas    592610 Jan  8 17:53 input.tar.gz
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas 391205900 Jan  9 12:09 HITS.pool.root.1
[2026-01-09 12:12:13] -rw-------. 1 boincer umatlas  10004480 Jan  9 12:12 result.tar.gz
12:12:15 (2603191): run_atlas exited; CPU time 131565.810790
12:12:15 (2603191): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN