Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:28:38 (32542): wrapper (7.7.26015): starting
06:28:38 (32542): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:28:38] Arguments: --nthreads 8
[2026-01-09 06:28:38] Threads: 8
[2026-01-09 06:28:38] Checking for CVMFS
[2026-01-09 06:28:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:28:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:28:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:28:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:28:38] 2.11.2.0 25330 34973 122064 154933 1 56 15923722 25165824 0 130560 0 16029458 99.795 10779514 3523 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:28:38] CVMFS is ok
[2026-01-09 06:28:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:28:38] Checking for apptainer binary...
[2026-01-09 06:28:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:28:38] Running /usr/bin/apptainer --version
[2026-01-09 06:28:38] apptainer version 1.3.2-1.el7
[2026-01-09 06:28:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:28:40] cg-vwn437.simple-grid.lan
[2026-01-09 06:28:40] apptainer works
[2026-01-09 06:28:40] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:28:40] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:28:40] Starting ATLAS job with PandaID=6963078300
[2026-01-09 06:28:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:25:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:25:38] 2026-01-09 11:24:49,264 | INFO     | monitor loop #1437: job 0:6963078300 is in state 'finished'
[2026-01-09 12:25:38] 2026-01-09 11:24:49,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:25:38] 2026-01-09 11:24:49,477 | INFO     | time since job start (21354s) is within the limit (174528.0s)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,733 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:25:38] 2026-01-09 11:24:50,734 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 12:25:38] 2026-01-09 11:24:50,736 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6963078300/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,737 | INFO     | extracted standard info from prmon json
[2026-01-09 12:25:38] 2026-01-09 11:24:50,737 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:25:38] 2026-01-09 11:24:50,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:25:38] 2026-01-09 11:24:50,745 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:25:38] 2026-01-09 11:24:50,746 | INFO     | sum of square deviations: 13294658992.674194
[2026-01-09 12:25:38] 2026-01-09 11:24:50,750 | INFO     | sum of deviations: 126373897647.21713
[2026-01-09 12:25:38] 2026-01-09 11:24:50,750 | INFO     | mean x: 1767947214.6914287
[2026-01-09 12:25:38] 2026-01-09 11:24:50,750 | INFO     | mean y: 2738325.705714286
[2026-01-09 12:25:38] 2026-01-09 11:24:50,751 | INFO     | intersect: -16802685602.671124
[2026-01-09 12:25:38] 2026-01-09 11:24:50,751 | INFO     | chi2: 5.357150351472716
[2026-01-09 12:25:38] 2026-01-09 11:24:50,752 | INFO     | sum of square deviations: 12733003779.988441
[2026-01-09 12:25:38] 2026-01-09 11:24:50,755 | INFO     | sum of deviations: 220035165295.58563
[2026-01-09 12:25:38] 2026-01-09 11:24:50,756 | INFO     | mean x: 1767947062.194203
[2026-01-09 12:25:38] 2026-01-09 11:24:50,756 | INFO     | mean y: 2763684.6927536232
[2026-01-09 12:25:38] 2026-01-09 11:24:50,756 | INFO     | intersect: -30548591736.651478
[2026-01-09 12:25:38] 2026-01-09 11:24:50,756 | INFO     | chi2: 2.8348066723102074
[2026-01-09 12:25:38] 2026-01-09 11:24:50,757 | INFO     | current chi2=2.8348066723102074 (change=47.08368281037883 %)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,757 | INFO     | sum of square deviations: 12187395379.797062
[2026-01-09 12:25:38] 2026-01-09 11:24:50,761 | INFO     | sum of deviations: 247717999679.3149
[2026-01-09 12:25:38] 2026-01-09 11:24:50,761 | INFO     | mean x: 1767946909.697059
[2026-01-09 12:25:38] 2026-01-09 11:24:50,761 | INFO     | mean y: 2771385.6147058825
[2026-01-09 12:25:38] 2026-01-09 11:24:50,761 | INFO     | intersect: -35932082482.7821
[2026-01-09 12:25:38] 2026-01-09 11:24:50,762 | INFO     | chi2: 2.504299036736955
[2026-01-09 12:25:38] 2026-01-09 11:24:50,762 | INFO     | current chi2=2.504299036736955 (change=11.65891271533898 %)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,762 | INFO     | right removable region: 339
[2026-01-09 12:25:38] 2026-01-09 11:24:50,763 | INFO     | sum of square deviations: 12732962909.98844
[2026-01-09 12:25:38] 2026-01-09 11:24:50,766 | INFO     | sum of deviations: 34170800855.35943
[2026-01-09 12:25:38] 2026-01-09 11:24:50,766 | INFO     | mean x: 1767947367.194203
[2026-01-09 12:25:38] 2026-01-09 11:24:50,766 | INFO     | mean y: 2763265.979710145
[2026-01-09 12:25:38] 2026-01-09 11:24:50,767 | INFO     | intersect: -4741786595.212414
[2026-01-09 12:25:38] 2026-01-09 11:24:50,767 | INFO     | chi2: 2.9723283575994977
[2026-01-09 12:25:38] 2026-01-09 11:24:50,767 | INFO     | current chi2=2.9723283575994977 (change=44.51661494282338 %)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,768 | INFO     | sum of square deviations: 12187334562.188263
[2026-01-09 12:25:38] 2026-01-09 11:24:50,772 | INFO     | sum of deviations: 17879586082.39997
[2026-01-09 12:25:38] 2026-01-09 11:24:50,772 | INFO     | mean x: 1767947519.6941175
[2026-01-09 12:25:38] 2026-01-09 11:24:50,772 | INFO     | mean y: 2767814.1
[2026-01-09 12:25:38] 2026-01-09 11:24:50,772 | INFO     | intersect: -2590922357.137969
[2026-01-09 12:25:38] 2026-01-09 11:24:50,773 | INFO     | chi2: 2.9311344791343723
[2026-01-09 12:25:38] 2026-01-09 11:24:50,773 | INFO     | current chi2=2.9311344791343723 (change=1.385912776419972 %)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,773 | INFO     | left removable region: 20
[2026-01-09 12:25:38] 2026-01-09 11:24:50,773 | INFO     | sum of square deviations: 10065681177.159801
[2026-01-09 12:25:38] 2026-01-09 11:24:50,777 | INFO     | sum of deviations: 122067024991.54544
[2026-01-09 12:25:38] 2026-01-09 11:24:50,777 | INFO     | mean x: 1767947489.2006269
[2026-01-09 12:25:38] 2026-01-09 11:24:50,777 | INFO     | mean y: 2807356.272727273
[2026-01-09 12:25:38] 2026-01-09 11:24:50,777 | INFO     | intersect: -21437181309.142838
[2026-01-09 12:25:38] 2026-01-09 11:24:50,778 | INFO     | chi2: 0.027863802858776966
[2026-01-09 12:25:38] 2026-01-09 11:24:50,778 | INFO     | current memory leak: 12.13 B/s (using 319 data points, chi2=0.03)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,779 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,779 | INFO     | ..............................
[2026-01-09 12:25:38] 2026-01-09 11:24:50,779 | INFO     | . Timing measurements:
[2026-01-09 12:25:38] 2026-01-09 11:24:50,779 | INFO     | . get job = 0 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,779 | INFO     | . initial setup = 1 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,779 | INFO     | . payload setup = 8 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,780 | INFO     | . stage-in = 0 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,780 | INFO     | . payload execution = 21313 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,780 | INFO     | . stage-out = 2 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,780 | INFO     | . log creation = 0 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,780 | INFO     | ..............................
[2026-01-09 12:25:38] 2026-01-09 11:24:50,892 | INFO     | 
[2026-01-09 12:25:38] 2026-01-09 11:24:50,892 | INFO     | job summary report
[2026-01-09 12:25:38] 2026-01-09 11:24:50,892 | INFO     | --------------------------------------------------
[2026-01-09 12:25:38] 2026-01-09 11:24:50,892 | INFO     | PanDA job id: 6963078300
[2026-01-09 12:25:38] 2026-01-09 11:24:50,892 | INFO     | task id: 47962010
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | errors: (none)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | pilot state: finished 
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | transexitcode: 0
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | exeerrorcode: 0
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | exeerrordiag: 
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | exitcode: 0
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | exitmsg: OK
[2026-01-09 12:25:38] 2026-01-09 11:24:50,893 | INFO     | cpuconsumptiontime: 164750 s
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | nevents: 450
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | neventsw: 0
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | pid: 10305
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | pgrp: 10305
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | corecount: 8
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | event service: False
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | sizes: {0: 2284448, 1: 2284647, 6: 2284909, 12: 2284937, 21325: 2319199, 21328: 2328193, 21329: 2328377, 21337: 2328623}
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | --------------------------------------------------
[2026-01-09 12:25:38] 2026-01-09 11:24:50,894 | INFO     | 
[2026-01-09 12:25:38] 2026-01-09 11:24:50,895 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-09 12:25:38] 2026-01-09 11:24:50,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,919 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:25:38] 2026-01-09 11:24:50,920 | INFO     | job 6963078300 has completed (purged errors)
[2026-01-09 12:25:38] 2026-01-09 11:24:50,920 | INFO     | overall cleanup function is called
[2026-01-09 12:25:38] 2026-01-09 11:24:51,940 | INFO     | --- collectZombieJob: --- 10, [10305]
[2026-01-09 12:25:38] 2026-01-09 11:24:51,941 | INFO     | zombie collector waiting for pid 10305
[2026-01-09 12:25:38] 2026-01-09 11:24:51,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:25:38] 2026-01-09 11:24:51,941 | INFO     | collected zombie processes
[2026-01-09 12:25:38] 2026-01-09 11:24:51,941 | INFO     | will attempt to kill all subprocesses of pid=10305
[2026-01-09 12:25:38] 2026-01-09 11:24:51,997 | INFO     | process IDs to be killed: [10305] (in reverse order)
[2026-01-09 12:25:38] 2026-01-09 11:24:52,051 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:25:38] 2026-01-09 11:24:52,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:25:38] 2026-01-09 11:24:52,053 | INFO     | did not find any defunct processes belonging to 10305
[2026-01-09 12:25:38] 2026-01-09 11:24:52,054 | INFO     | did not find any defunct processes belonging to 10305
[2026-01-09 12:25:38] 2026-01-09 11:24:52,055 | INFO     | ready for new job
[2026-01-09 12:25:38] 2026-01-09 11:24:52,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:25:38] 2026-01-09 11:24:52,057 | INFO     | ***************************************
[2026-01-09 12:25:38] 2026-01-09 11:24:52,057 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:25:38] 2026-01-09 11:24:52,057 | INFO     | ***************************************
[2026-01-09 12:25:38] 2026-01-09 11:24:52,058 | INFO     | 
[2026-01-09 12:25:38] 2026-01-09 11:24:52,058 | INFO     | pilot is running in a VM
[2026-01-09 12:25:38] 2026-01-09 11:24:52,058 | INFO     | architecture information:
[2026-01-09 12:25:38] 2026-01-09 11:24:52,059 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:25:38] 2026-01-09 11:24:52,078 | INFO     | cat /etc/os-release:
[2026-01-09 12:25:38] NAME="CentOS Linux"
[2026-01-09 12:25:38] VERSION="7 (Core)"
[2026-01-09 12:25:38] ID="centos"
[2026-01-09 12:25:38] ID_LIKE="rhel fedora"
[2026-01-09 12:25:38] VERSION_ID="7"
[2026-01-09 12:25:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:25:38] ANSI_COLOR="0;31"
[2026-01-09 12:25:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:25:38] HOME_URL="https://www.centos.org/"
[2026-01-09 12:25:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:25:38] 
[2026-01-09 12:25:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:25:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:25:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:25:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:25:38] 
[2026-01-09 12:25:38] 2026-01-09 11:24:52,078 | INFO     | ***************************************
[2026-01-09 12:25:38] 2026-01-09 11:24:52,581 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-09 12:25:38] 2026-01-09 11:24:52,601 | INFO     | sufficient remaining disk space (497386782720 B)
[2026-01-09 12:25:38] 2026-01-09 11:24:52,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:25:38] 2026-01-09 11:24:52,602 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:25:38] 2026-01-09 11:24:52,602 | INFO     | update_server=False
[2026-01-09 12:25:38] 2026-01-09 11:24:52,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:25:38] 2026-01-09 11:24:52,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:25:38] 2026-01-09 11:24:52,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:25:38] 2026-01-09 11:24:52,773 | INFO     | aborting loop
[2026-01-09 12:25:38] 2026-01-09 11:24:52,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:25:38] 2026-01-09 11:24:52,963 | INFO     | all data control threads have been joined
[2026-01-09 12:25:38] 2026-01-09 11:24:53,479 | INFO     | all payload control threads have been joined
[2026-01-09 12:25:38] 2026-01-09 11:24:53,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:25:38] 2026-01-09 11:24:53,607 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:53,608 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:53,661 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:53,779 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:53,968 | INFO     | [data] control thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,030 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,164 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,227 | INFO     | all job control threads have been joined
[2026-01-09 12:25:38] 2026-01-09 11:24:54,485 | INFO     | [payload] control thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,543 | INFO     | [job] validate thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,695 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,782 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,886 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:54,903 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:55,233 | INFO     | [job] control thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:24:57,521 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:25:02,898 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:25:38] 2026-01-09 11:25:03,904 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:25:38] 2026-01-09 11:25:22,560 | INFO     | PID=3878 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 12:25:38] 2026-01-09 11:25:22,560 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:25:38] 2026-01-09 11:25:22,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:25:38] 2026-01-09 11:25:22,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:25:38] 2026-01-09 11:25:31,136 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:25:38] 2026-01-09 11:25:32,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989499529024)>', '<ExcThread(monitor, started 139989048338176)>']
[2026-01-09 12:25:38] 2026-01-09 11:25:33,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:25:38] 2026-01-09 11:25:33,618 | INFO     | [monitor] control thread has ended
[2026-01-09 12:25:38] 2026-01-09 11:25:37,937 | INFO     | all workflow threads have been joined
[2026-01-09 12:25:38] 2026-01-09 11:25:37,937 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:25:38] 2026-01-09 11:25:37,938 | INFO     | traces error code: 0
[2026-01-09 12:25:38] 2026-01-09 11:25:37,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:25:38] 2026-01-09 11:25:38,076 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:25:38] 2026-01-09 11:25:38,080 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:25:38] 2026-01-09 11:25:38,083 [wrapper] pilotpid: 3878
[2026-01-09 12:25:38] 2026-01-09 11:25:38,087 [wrapper] Pilot exit status: 0
[2026-01-09 12:25:38] 2026-01-09 11:25:38,103 [wrapper] pandaids: 6963078300
[2026-01-09 12:25:38] 2026-01-09 11:25:38,138 [wrapper] cleanup supervisor_pilot 10960 3879
[2026-01-09 12:25:38] 2026-01-09 11:25:38,142 [wrapper] Test setup, not cleaning
[2026-01-09 12:25:38] 2026-01-09 11:25:38,145 [wrapper] apfmon messages muted
[2026-01-09 12:25:38] 2026-01-09 11:25:38,149 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:25:38] 2026-01-09 11:25:38,152 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:25:38]  *** Error codes and diagnostics ***
[2026-01-09 12:25:38]     "exeErrorCode": 0,
[2026-01-09 12:25:38]     "exeErrorDiag": "",
[2026-01-09 12:25:38]     "pilotErrorCode": 0,
[2026-01-09 12:25:38]     "pilotErrorDiag": "",
[2026-01-09 12:25:38]  *** Listing of results directory ***
[2026-01-09 12:25:38] total 779248
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 12:25:38] -rwx------. 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:57 queuedata.json
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:25:38] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:28 run_atlas
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:28 job.xml
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc      6390 Jan  9 06:28 init_data.xml
[2026-01-09 12:25:38] -rw-r--r--. 2 boinc boinc 393433002 Jan  9 06:28 EVNT.47962006._000050.pool.root.1
[2026-01-09 12:25:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:28 start_atlas.sh
[2026-01-09 12:25:38] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:28 shared
[2026-01-09 12:25:38] -rw-r--r--. 2 boinc boinc    592608 Jan  9 06:28 input.tar.gz
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:28 boinc_lockfile
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc      2890 Jan  9 06:28 pandaJob.out
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc    989771 Jan  9 06:28 agis_schedconf.cvmfs.json
[2026-01-09 12:25:38] drwx------. 5 boinc boinc      4096 Jan  9 06:28 pilot3
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc       533 Jan  9 12:15 boinc_task_state.xml
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc 391867419 Jan  9 12:24 HITS.47962010._000437.pool.root.1
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc      1024 Jan  9 12:24 memory_monitor_summary.json
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc        95 Jan  9 12:24 pilot_heartbeat.json
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc   1516240 Jan  9 12:24 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc   1536987 Jan  9 12:24 log.47962010._000437.job.log.tgz.1
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc      8609 Jan  9 12:24 heartbeat.json
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc        29 Jan  9 12:25 wrapper_checkpoint.txt
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc      4880 Jan  9 12:25 pilotlog.txt
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc   2837853 Jan  9 12:25 log.47962010._000437.job.log.1
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc       353 Jan  9 12:25 output.list
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc       620 Jan  9 12:25 runtime_log
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc   4392960 Jan  9 12:25 result.tar.gz
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc      8817 Jan  9 12:25 runtime_log.err
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc       659 Jan  9 12:25 FKULDmNo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnHfKDmF0l1Eo.diag
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc      8192 Jan  9 12:25 boinc_mmap_file
[2026-01-09 12:25:38] -rw-r--r--. 1 boinc boinc     20847 Jan  9 12:25 stderr.txt
[2026-01-09 12:25:38] HITS file was successfully produced:
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc 391867419 Jan  9 12:24 shared/HITS.pool.root.1
[2026-01-09 12:25:38]  *** Contents of shared directory: ***
[2026-01-09 12:25:38] total 771784
[2026-01-09 12:25:38] -rw-r--r--. 2 boinc boinc 393433002 Jan  9 06:28 ATLAS.root_0
[2026-01-09 12:25:38] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:28 start_atlas.sh
[2026-01-09 12:25:38] -rw-r--r--. 2 boinc boinc    592608 Jan  9 06:28 input.tar.gz
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc 391867419 Jan  9 12:24 HITS.pool.root.1
[2026-01-09 12:25:38] -rw-------. 1 boinc boinc   4392960 Jan  9 12:25 result.tar.gz
12:25:39 (32542): run_atlas exited; CPU time 164736.901582
12:25:39 (32542): called boinc_finish(0)

</stderr_txt>
]]>

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