Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:47 (19124): wrapper (7.7.26015): starting
18:03:47 (19124): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 18:03:47] Arguments: --nthreads 8
[2026-01-08 18:03:47] Threads: 8
[2026-01-08 18:03:47] Checking for CVMFS
[2026-01-08 18:03:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:03:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:03:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:03:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:03:47] 2.11.2.0 2847 135855 80448 154922 0 56 18710661 20275201 1 130560 0 36245797 99.834 8751531 26236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 18:03:47] CVMFS is ok
[2026-01-08 18:03:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 18:03:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 18:03:47] Further information can be found at the LHC@home message board.
[2026-01-08 18:03:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:03:47] Checking for apptainer binary...
[2026-01-08 18:03:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:03:47] Running /usr/bin/apptainer --version
[2026-01-08 18:03:47] apptainer version 1.3.2-1.el7
[2026-01-08 18:03:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:03:49] c-204-19.aglt2.org
[2026-01-08 18:03:49] apptainer works
[2026-01-08 18:03:49] Set ATHENA_PROC_NUMBER=8
[2026-01-08 18:03:49] Set ATHENA_CORE_NUMBER=8
[2026-01-08 18:03:49] Starting ATLAS job with PandaID=6963078211
[2026-01-08 18:03:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 01:08:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 01:08:54] 2026-01-09 06:08:03,248 | INFO     | time since job start (25436s) is within the limit (174528.0s)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,171 | INFO     | monitor loop #1882: job 0:6963078211 is in state 'finished'
[2026-01-09 01:08:54] 2026-01-09 06:08:05,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,253 | INFO     | time since job start (25438s) is within the limit (174528.0s)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,864 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 01:08:54] 2026-01-09 06:08:05,867 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2026-01-09 01:08:54] 2026-01-09 06:08:05,869 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963078211/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,870 | INFO     | extracted standard info from prmon json
[2026-01-09 01:08:54] 2026-01-09 06:08:05,870 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 01:08:54] 2026-01-09 06:08:05,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 01:08:54] 2026-01-09 06:08:05,879 | INFO     | fitting pss+swap vs Time
[2026-01-09 01:08:54] 2026-01-09 06:08:05,879 | INFO     | sum of square deviations: 22484466139.179924
[2026-01-09 01:08:54] 2026-01-09 06:08:05,883 | INFO     | sum of deviations: 214515641357.4459
[2026-01-09 01:08:54] 2026-01-09 06:08:05,883 | INFO     | mean x: 1767926170.352518
[2026-01-09 01:08:54] 2026-01-09 06:08:05,884 | INFO     | mean y: 2738893.194244604
[2026-01-09 01:08:54] 2026-01-09 06:08:05,884 | INFO     | intersect: -16864364553.168299
[2026-01-09 01:08:54] 2026-01-09 06:08:05,884 | INFO     | chi2: 6.115065410600327
[2026-01-09 01:08:54] 2026-01-09 06:08:05,885 | INFO     | sum of square deviations: 21685370408.551037
[2026-01-09 01:08:54] 2026-01-09 06:08:05,889 | INFO     | sum of deviations: 348934637151.79364
[2026-01-09 01:08:54] 2026-01-09 06:08:05,889 | INFO     | mean x: 1767926017.856796
[2026-01-09 01:08:54] 2026-01-09 06:08:05,889 | INFO     | mean y: 2764517.555825243
[2026-01-09 01:08:54] 2026-01-09 06:08:05,889 | INFO     | intersect: -28444553279.18435
[2026-01-09 01:08:54] 2026-01-09 06:08:05,890 | INFO     | chi2: 2.740143859748154
[2026-01-09 01:08:54] 2026-01-09 06:08:05,890 | INFO     | current chi2=2.740143859748154 (change=55.19027719641107 %)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,891 | INFO     | sum of square deviations: 20905437827.906837
[2026-01-09 01:08:54] 2026-01-09 06:08:05,894 | INFO     | sum of deviations: 381716887001.4522
[2026-01-09 01:08:54] 2026-01-09 06:08:05,895 | INFO     | mean x: 1767925865.3611794
[2026-01-09 01:08:54] 2026-01-09 06:08:05,895 | INFO     | mean y: 2770915.724815725
[2026-01-09 01:08:54] 2026-01-09 06:08:05,895 | INFO     | intersect: -32278167820.423492
[2026-01-09 01:08:54] 2026-01-09 06:08:05,895 | INFO     | chi2: 2.4375970610775655
[2026-01-09 01:08:54] 2026-01-09 06:08:05,895 | INFO     | current chi2=2.4375970610775655 (change=11.04127425989947 %)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,896 | INFO     | right removable region: 406
[2026-01-09 01:08:54] 2026-01-09 06:08:05,896 | INFO     | sum of square deviations: 21685280738.55105
[2026-01-09 01:08:54] 2026-01-09 06:08:05,900 | INFO     | sum of deviations: 106570104569.71082
[2026-01-09 01:08:54] 2026-01-09 06:08:05,900 | INFO     | mean x: 1767926322.856796
[2026-01-09 01:08:54] 2026-01-09 06:08:05,900 | INFO     | mean y: 2759424.9781553396
[2026-01-09 01:08:54] 2026-01-09 06:08:05,900 | INFO     | intersect: -8685534509.047344
[2026-01-09 01:08:54] 2026-01-09 06:08:05,901 | INFO     | chi2: 3.8221201394002993
[2026-01-09 01:08:54] 2026-01-09 06:08:05,901 | INFO     | current chi2=3.8221201394002993 (change=37.4966597614027 %)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,902 | INFO     | sum of square deviations: 20905308873.341442
[2026-01-09 01:08:54] 2026-01-09 06:08:05,905 | INFO     | sum of deviations: 88284139762.16202
[2026-01-09 01:08:54] 2026-01-09 06:08:05,905 | INFO     | mean x: 1767926475.3562653
[2026-01-09 01:08:54] 2026-01-09 06:08:05,906 | INFO     | mean y: 2762997.054054054
[2026-01-09 01:08:54] 2026-01-09 06:08:05,906 | INFO     | intersect: -7463276801.028666
[2026-01-09 01:08:54] 2026-01-09 06:08:05,906 | INFO     | chi2: 3.7975805778514182
[2026-01-09 01:08:54] 2026-01-09 06:08:05,906 | INFO     | current chi2=3.7975805778514182 (change=0.6420405600523944 %)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,906 | INFO     | left removable region: 20
[2026-01-09 01:08:54] 2026-01-09 06:08:05,907 | INFO     | sum of square deviations: 17833522444.994904
[2026-01-09 01:08:54] 2026-01-09 06:08:05,910 | INFO     | sum of deviations: 224520295842.46124
[2026-01-09 01:08:54] 2026-01-09 06:08:05,911 | INFO     | mean x: 1767926444.865285
[2026-01-09 01:08:54] 2026-01-09 06:08:05,911 | INFO     | mean y: 2803993.4896373055
[2026-01-09 01:08:54] 2026-01-09 06:08:05,911 | INFO     | intersect: -22255018018.575462
[2026-01-09 01:08:54] 2026-01-09 06:08:05,911 | INFO     | chi2: 0.030620420734539643
[2026-01-09 01:08:54] 2026-01-09 06:08:05,911 | INFO     | current memory leak: 12.59 B/s (using 386 data points, chi2=0.03)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,912 | INFO     | could have reported an average CPU frequency of 2118 MHz (17 samples)
[2026-01-09 01:08:54] 2026-01-09 06:08:05,912 | INFO     | ..............................
[2026-01-09 01:08:54] 2026-01-09 06:08:05,912 | INFO     | . Timing measurements:
[2026-01-09 01:08:54] 2026-01-09 06:08:05,912 | INFO     | . get job = 0 s
[2026-01-09 01:08:54] 2026-01-09 06:08:05,912 | INFO     | . initial setup = 2 s
[2026-01-09 01:08:54] 2026-01-09 06:08:05,913 | INFO     | . payload setup = 10 s
[2026-01-09 01:08:54] 2026-01-09 06:08:05,913 | INFO     | . stage-in = 0 s
[2026-01-09 01:08:54] 2026-01-09 06:08:05,913 | INFO     | . payload execution = 25396 s
[2026-01-09 01:08:54] 2026-01-09 06:08:05,913 | INFO     | . stage-out = 2 s
[2026-01-09 01:08:54] 2026-01-09 06:08:05,913 | INFO     | . log creation = 0 s
[2026-01-09 01:08:54] 2026-01-09 06:08:05,913 | INFO     | ..............................
[2026-01-09 01:08:54] 2026-01-09 06:08:06,391 | INFO     | 
[2026-01-09 01:08:54] 2026-01-09 06:08:06,392 | INFO     | job summary report
[2026-01-09 01:08:54] 2026-01-09 06:08:06,392 | INFO     | --------------------------------------------------
[2026-01-09 01:08:54] 2026-01-09 06:08:06,392 | INFO     | PanDA job id: 6963078211
[2026-01-09 01:08:54] 2026-01-09 06:08:06,392 | INFO     | task id: 47962010
[2026-01-09 01:08:54] 2026-01-09 06:08:06,392 | INFO     | errors: (none)
[2026-01-09 01:08:54] 2026-01-09 06:08:06,393 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 01:08:54] 2026-01-09 06:08:06,393 | INFO     | pilot state: finished 
[2026-01-09 01:08:54] 2026-01-09 06:08:06,393 | INFO     | transexitcode: 0
[2026-01-09 01:08:54] 2026-01-09 06:08:06,393 | INFO     | exeerrorcode: 0
[2026-01-09 01:08:54] 2026-01-09 06:08:06,393 | INFO     | exeerrordiag: 
[2026-01-09 01:08:54] 2026-01-09 06:08:06,393 | INFO     | exitcode: 0
[2026-01-09 01:08:54] 2026-01-09 06:08:06,394 | INFO     | exitmsg: OK
[2026-01-09 01:08:54] 2026-01-09 06:08:06,394 | INFO     | cpuconsumptiontime: 194497 s
[2026-01-09 01:08:54] 2026-01-09 06:08:06,394 | INFO     | nevents: 450
[2026-01-09 01:08:54] 2026-01-09 06:08:06,394 | INFO     | neventsw: 0
[2026-01-09 01:08:54] 2026-01-09 06:08:06,394 | INFO     | pid: 29251
[2026-01-09 01:08:54] 2026-01-09 06:08:06,395 | INFO     | pgrp: 29251
[2026-01-09 01:08:54] 2026-01-09 06:08:06,395 | INFO     | corecount: 8
[2026-01-09 01:08:54] 2026-01-09 06:08:06,395 | INFO     | event service: False
[2026-01-09 01:08:54] 2026-01-09 06:08:06,395 | INFO     | sizes: {0: 2283791, 1: 2284647, 7: 2284909, 12: 2284937, 25411: 2321869, 25414: 2330863, 25415: 2331047, 25421: 2331357}
[2026-01-09 01:08:54] 2026-01-09 06:08:06,395 | INFO     | --------------------------------------------------
[2026-01-09 01:08:54] 2026-01-09 06:08:06,395 | INFO     | 
[2026-01-09 01:08:54] 2026-01-09 06:08:06,396 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 01:08:54] 2026-01-09 06:08:06,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,424 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,424 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,427 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 01:08:54] 2026-01-09 06:08:06,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 01:08:54] 2026-01-09 06:08:06,428 | INFO     | job 6963078211 has completed (purged errors)
[2026-01-09 01:08:54] 2026-01-09 06:08:06,428 | INFO     | overall cleanup function is called
[2026-01-09 01:08:54] 2026-01-09 06:08:07,443 | INFO     | --- collectZombieJob: --- 10, [29251]
[2026-01-09 01:08:54] 2026-01-09 06:08:07,444 | INFO     | zombie collector waiting for pid 29251
[2026-01-09 01:08:54] 2026-01-09 06:08:07,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 01:08:54] 2026-01-09 06:08:07,444 | INFO     | collected zombie processes
[2026-01-09 01:08:54] 2026-01-09 06:08:07,444 | INFO     | will attempt to kill all subprocesses of pid=29251
[2026-01-09 01:08:54] 2026-01-09 06:08:07,536 | INFO     | process IDs to be killed: [29251] (in reverse order)
[2026-01-09 01:08:54] 2026-01-09 06:08:07,596 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 01:08:54] 2026-01-09 06:08:07,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 01:08:54] 2026-01-09 06:08:07,601 | INFO     | did not find any defunct processes belonging to 29251
[2026-01-09 01:08:54] 2026-01-09 06:08:07,605 | INFO     | did not find any defunct processes belonging to 29251
[2026-01-09 01:08:54] 2026-01-09 06:08:07,605 | INFO     | ready for new job
[2026-01-09 01:08:54] 2026-01-09 06:08:07,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 01:08:54] 2026-01-09 06:08:07,610 | INFO     | ***************************************
[2026-01-09 01:08:54] 2026-01-09 06:08:07,611 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 01:08:54] 2026-01-09 06:08:07,611 | INFO     | ***************************************
[2026-01-09 01:08:54] 2026-01-09 06:08:07,611 | INFO     | 
[2026-01-09 01:08:54] 2026-01-09 06:08:07,612 | INFO     | architecture information:
[2026-01-09 01:08:54] 2026-01-09 06:08:07,613 | INFO     | executing command: cat /etc/os-release
[2026-01-09 01:08:54] 2026-01-09 06:08:07,633 | INFO     | cat /etc/os-release:
[2026-01-09 01:08:54] NAME="CentOS Linux"
[2026-01-09 01:08:54] VERSION="7 (Core)"
[2026-01-09 01:08:54] ID="centos"
[2026-01-09 01:08:54] ID_LIKE="rhel fedora"
[2026-01-09 01:08:54] VERSION_ID="7"
[2026-01-09 01:08:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 01:08:54] ANSI_COLOR="0;31"
[2026-01-09 01:08:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 01:08:54] HOME_URL="https://www.centos.org/"
[2026-01-09 01:08:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 01:08:54] 
[2026-01-09 01:08:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 01:08:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 01:08:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 01:08:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 01:08:54] 
[2026-01-09 01:08:54] 2026-01-09 06:08:07,633 | INFO     | ***************************************
[2026-01-09 01:08:54] 2026-01-09 06:08:08,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 01:08:54] 2026-01-09 06:08:08,157 | INFO     | sufficient remaining disk space (17978884096 B)
[2026-01-09 01:08:54] 2026-01-09 06:08:08,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 01:08:54] 2026-01-09 06:08:08,158 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 01:08:54] 2026-01-09 06:08:08,159 | INFO     | update_server=False
[2026-01-09 01:08:54] 2026-01-09 06:08:08,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 01:08:54] 2026-01-09 06:08:08,232 | INFO     | all job control threads have been joined
[2026-01-09 01:08:54] 2026-01-09 06:08:08,574 | INFO     | all data control threads have been joined
[2026-01-09 01:08:54] 2026-01-09 06:08:08,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:08:54] 2026-01-09 06:08:08,679 | INFO     | aborting loop
[2026-01-09 01:08:54] 2026-01-09 06:08:09,074 | INFO     | all payload control threads have been joined
[2026-01-09 01:08:54] 2026-01-09 06:08:09,164 | INFO     | [job] retrieve thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:09,237 | INFO     | [job] control thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:09,271 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:09,580 | INFO     | [data] control thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:09,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 01:08:54] 2026-01-09 06:08:09,684 | INFO     | [job] job monitor thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:09,787 | INFO     | [payload] failed_post thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:09,977 | INFO     | [payload] validate_post thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:10,077 | INFO     | [payload] control thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:10,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 01:08:54] 2026-01-09 06:08:10,268 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:10,347 | INFO     | [job] validate thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:10,397 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:10,444 | INFO     | [data] copytool_in thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:11,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 01:08:54] 2026-01-09 06:08:11,651 | INFO     | [data] copytool_out thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:12,015 | INFO     | [job] queue monitor thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:14,118 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:18,832 | INFO     | job.realtimelogging is not enabled
[2026-01-09 01:08:54] 2026-01-09 06:08:19,838 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 01:08:54] 2026-01-09 06:08:38,470 | INFO     | PID=22845 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 01:08:54] 2026-01-09 06:08:38,470 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 01:08:54] 2026-01-09 06:08:38,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 01:08:54] 2026-01-09 06:08:38,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 01:08:54] 2026-01-09 06:08:48,360 | INFO     | [monitor] cgroup control has ended
[2026-01-09 01:08:54] 2026-01-09 06:08:49,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672495609664)>', '<ExcThread(monitor, started 139671891846912)>']
[2026-01-09 01:08:54] 2026-01-09 06:08:49,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 01:08:54] 2026-01-09 06:08:49,526 | INFO     | [monitor] control thread has ended
[2026-01-09 01:08:54] 2026-01-09 06:08:54,386 | INFO     | all workflow threads have been joined
[2026-01-09 01:08:54] 2026-01-09 06:08:54,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 01:08:54] 2026-01-09 06:08:54,387 | INFO     | traces error code: 0
[2026-01-09 01:08:54] 2026-01-09 06:08:54,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 01:08:54] 2026-01-09 06:08:54,496 [wrapper] ==== pilot stdout END ====
[2026-01-09 01:08:54] 2026-01-09 06:08:54,501 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 01:08:54] 2026-01-09 06:08:54,506 [wrapper] pilotpid: 22845
[2026-01-09 01:08:54] 2026-01-09 06:08:54,511 [wrapper] Pilot exit status: 0
[2026-01-09 01:08:54] 2026-01-09 06:08:54,527 [wrapper] pandaids: 6963078211
[2026-01-09 01:08:54] 2026-01-09 06:08:54,586 [wrapper] cleanup supervisor_pilot 32141 22846
[2026-01-09 01:08:54] 2026-01-09 06:08:54,591 [wrapper] Test setup, not cleaning
[2026-01-09 01:08:54] 2026-01-09 06:08:54,596 [wrapper] apfmon messages muted
[2026-01-09 01:08:54] 2026-01-09 06:08:54,602 [wrapper] ==== wrapper stdout END ====
[2026-01-09 01:08:54] 2026-01-09 06:08:54,606 [wrapper] ==== wrapper stderr END ====
[2026-01-09 01:08:54]  *** Error codes and diagnostics ***
[2026-01-09 01:08:54]     "exeErrorCode": 0,
[2026-01-09 01:08:54]     "exeErrorDiag": "",
[2026-01-09 01:08:54]     "pilotErrorCode": 0,
[2026-01-09 01:08:54]     "pilotErrorDiag": "",
[2026-01-09 01:08:54]  *** Listing of results directory ***
[2026-01-09 01:08:54] total 791756
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-09 01:08:54] -rwx------ 1 boincer umatlas     36322 Jan  8 06:56 runpilot2-wrapper.sh
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 06:57 queuedata.json
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas       100 Jan  8 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 01:08:54] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 18:03 run_atlas
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas       105 Jan  8 18:03 job.xml
[2026-01-09 01:08:54] -rw-r--r-- 2 boincer umatlas 392805046 Jan  8 18:03 EVNT.47962006._000046.pool.root.1
[2026-01-09 01:08:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:03 start_atlas.sh
[2026-01-09 01:08:54] drwxrwx--x 2 boincer umatlas      4096 Jan  8 18:03 shared
[2026-01-09 01:08:54] -rw-r--r-- 2 boincer umatlas    592611 Jan  8 18:03 input.tar.gz
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas         0 Jan  8 18:03 boinc_lockfile
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas      2890 Jan  8 18:03 pandaJob.out
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas        57 Jan  8 18:03 setup.sh.local
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas    989837 Jan  8 18:04 agis_schedconf.cvmfs.json
[2026-01-09 01:08:54] drwx------ 5 boincer umatlas      4096 Jan  8 18:04 pilot3
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas       532 Jan  9 00:56 boinc_task_state.xml
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas      5911 Jan  9 01:01 init_data.xml
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas 403729888 Jan  9 01:07 HITS.47962010._000348.pool.root.1
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas      1057 Jan  9 01:07 memory_monitor_summary.json
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas   1516240 Jan  9 01:07 agis_ddmendpoints.agis.ALL.json
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas   1602174 Jan  9 01:07 log.47962010._000348.job.log.tgz.1
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas      8645 Jan  9 01:08 heartbeat.json
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas        95 Jan  9 01:08 pilot_heartbeat.json
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 01:08 boinc_mmap_file
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas        29 Jan  9 01:08 wrapper_checkpoint.txt
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas      4818 Jan  9 01:08 pilotlog.txt
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas   3548568 Jan  9 01:08 log.47962010._000348.job.log.1
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas       353 Jan  9 01:08 output.list
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas       620 Jan  9 01:08 runtime_log
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas   5171200 Jan  9 01:08 result.tar.gz
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas       668 Jan  9 01:08 YIqNDmMo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQGfKDmzzn3im.diag
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 01:08 runtime_log.err
[2026-01-09 01:08:54] -rw-r--r-- 1 boincer umatlas     21189 Jan  9 01:08 stderr.txt
[2026-01-09 01:08:54] HITS file was successfully produced:
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas 403729888 Jan  9 01:07 shared/HITS.pool.root.1
[2026-01-09 01:08:54]  *** Contents of shared directory: ***
[2026-01-09 01:08:54] total 783520
[2026-01-09 01:08:54] -rw-r--r-- 2 boincer umatlas 392805046 Jan  8 18:03 ATLAS.root_0
[2026-01-09 01:08:54] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 18:03 start_atlas.sh
[2026-01-09 01:08:54] -rw-r--r-- 2 boincer umatlas    592611 Jan  8 18:03 input.tar.gz
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas 403729888 Jan  9 01:07 HITS.pool.root.1
[2026-01-09 01:08:54] -rw------- 1 boincer umatlas   5171200 Jan  9 01:08 result.tar.gz
01:08:56 (19124): run_atlas exited; CPU time 192027.101402
01:08:56 (19124): called boinc_finish(0)

</stderr_txt>
]]>

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