Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:09:08 (290108): wrapper (7.7.26015): starting
09:09:08 (290108): wrapper: running run_atlas (--nthreads 6)
[2026-01-09 09:09:08] Arguments: --nthreads 6
[2026-01-09 09:09:08] Threads: 6
[2026-01-09 09:09:08] Checking for CVMFS
[2026-01-09 09:09:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:09:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:09:09] 2.13.3.0 123159 445 56252 154924 1 188 38890961 52428801 922 130560 0 511208 99.992 16617 119 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 09:09:09] CVMFS is ok
[2026-01-09 09:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:09:09] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 09:09:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 09:09:09] Further information can be found at the LHC@home message board.
[2026-01-09 09:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:09:09] Checking for apptainer binary...
[2026-01-09 09:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:09:09] Running /usr/bin/apptainer --version
[2026-01-09 09:09:09] apptainer version 1.4.5-2.el9
[2026-01-09 09:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:09:09] Atto003
[2026-01-09 09:09:09] apptainer works
[2026-01-09 09:09:09] Set ATHENA_PROC_NUMBER=6
[2026-01-09 09:09:09] Set ATHENA_CORE_NUMBER=6
[2026-01-09 09:09:09] Starting ATLAS job with PandaID=6963078203
[2026-01-09 09:09:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:35:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:35:56] 2026-01-09 05:35:07,577 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:35:56] 2026-01-09 05:35:07,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:35:56] 2026-01-09 05:35:07,581 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:35:56] 2026-01-09 05:35:07,582 | INFO     | sum of square deviations: 10160711440.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,584 | INFO     | sum of deviations: 151618315150.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,584 | INFO     | mean x: 1767927111.5
[2026-01-09 14:35:56] 2026-01-09 05:35:07,584 | INFO     | mean y: 2535389.125
[2026-01-09 14:35:56] 2026-01-09 05:35:07,584 | INFO     | intersect: -26378504121.39536
[2026-01-09 14:35:56] 2026-01-09 05:35:07,584 | INFO     | chi2: 7.806726088304886
[2026-01-09 14:35:56] 2026-01-09 05:35:07,585 | INFO     | sum of square deviations: 9691828230.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,587 | INFO     | sum of deviations: 238408868832.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,587 | INFO     | mean x: 1767926959.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,587 | INFO     | mean y: 2563628.9904761906
[2026-01-09 14:35:56] 2026-01-09 05:35:07,587 | INFO     | intersect: -43486596152.86707
[2026-01-09 14:35:56] 2026-01-09 05:35:07,587 | INFO     | chi2: 5.164309215498792
[2026-01-09 14:35:56] 2026-01-09 05:35:07,587 | INFO     | current chi2=5.164309215498792 (change=33.84795166266497 %)
[2026-01-09 14:35:56] 2026-01-09 05:35:07,588 | INFO     | sum of square deviations: 9237596457.5
[2026-01-09 14:35:56] 2026-01-09 05:35:07,590 | INFO     | sum of deviations: 268779591898.00003
[2026-01-09 14:35:56] 2026-01-09 05:35:07,590 | INFO     | mean x: 1767926806.5
[2026-01-09 14:35:56] 2026-01-09 05:35:07,590 | INFO     | mean y: 2573798.6516129035
[2026-01-09 14:35:56] 2026-01-09 05:35:07,590 | INFO     | intersect: -51437500223.071205
[2026-01-09 14:35:56] 2026-01-09 05:35:07,590 | INFO     | chi2: 4.688942906523756
[2026-01-09 14:35:56] 2026-01-09 05:35:07,590 | INFO     | current chi2=4.688942906523756 (change=9.204838229833296 %)
[2026-01-09 14:35:56] 2026-01-09 05:35:07,590 | INFO     | right removable region: 309
[2026-01-09 14:35:56] 2026-01-09 05:35:07,591 | INFO     | sum of square deviations: 9691828230.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,592 | INFO     | sum of deviations: 62601236031.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,593 | INFO     | mean x: 1767927264.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,593 | INFO     | mean y: 2564303.1365079363
[2026-01-09 14:35:56] 2026-01-09 05:35:07,593 | INFO     | intersect: -11416791190.259813
[2026-01-09 14:35:56] 2026-01-09 05:35:07,593 | INFO     | chi2: 5.068950535871627
[2026-01-09 14:35:56] 2026-01-09 05:35:07,593 | INFO     | current chi2=5.068950535871627 (change=35.06944551999423 %)
[2026-01-09 14:35:56] 2026-01-09 05:35:07,593 | INFO     | sum of square deviations: 9237596457.5
[2026-01-09 14:35:56] 2026-01-09 05:35:07,595 | INFO     | sum of deviations: -12299433934.500004
[2026-01-09 14:35:56] 2026-01-09 05:35:07,595 | INFO     | mean x: 1767927416.5
[2026-01-09 14:35:56] 2026-01-09 05:35:07,595 | INFO     | mean y: 2589426.5387096773
[2026-01-09 14:35:56] 2026-01-09 05:35:07,595 | INFO     | intersect: 2356503300.160962
[2026-01-09 14:35:56] 2026-01-09 05:35:07,596 | INFO     | chi2: 3.249519263772155
[2026-01-09 14:35:56] 2026-01-09 05:35:07,596 | INFO     | current chi2=3.249519263772155 (change=35.89364818661844 %)
[2026-01-09 14:35:56] 2026-01-09 05:35:07,596 | INFO     | sum of square deviations: 8797783560.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,598 | INFO     | sum of deviations: -26560287062.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,598 | INFO     | mean x: 1767927569.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,598 | INFO     | mean y: 2594363.6950819674
[2026-01-09 14:35:56] 2026-01-09 05:35:07,598 | INFO     | intersect: 5339923182.621358
[2026-01-09 14:35:56] 2026-01-09 05:35:07,599 | INFO     | chi2: 3.1914623298736156
[2026-01-09 14:35:56] 2026-01-09 05:35:07,599 | INFO     | current chi2=3.1914623298736156 (change=1.7866314733319966 %)
[2026-01-09 14:35:56] 2026-01-09 05:35:07,599 | INFO     | left removable region: 30
[2026-01-09 14:35:56] 2026-01-09 05:35:07,599 | INFO     | sum of square deviations: 6734191380.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,600 | INFO     | sum of deviations: 69840489538.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,601 | INFO     | mean x: 1767927691.0
[2026-01-09 14:35:56] 2026-01-09 05:35:07,601 | INFO     | mean y: 2645645.6272401433
[2026-01-09 14:35:56] 2026-01-09 05:35:07,601 | INFO     | intersect: -18332582511.673214
[2026-01-09 14:35:56] 2026-01-09 05:35:07,601 | INFO     | chi2: 0.01452693458884128
[2026-01-09 14:35:56] 2026-01-09 05:35:07,601 | INFO     | current memory leak: 10.37 B/s (using 279 data points, chi2=0.01)
[2026-01-09 14:35:56] 2026-01-09 05:35:07,601 | INFO     | could have reported an average CPU frequency of 3642 MHz (14 samples)
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | ..............................
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . Timing measurements:
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . get job = 0 s
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . initial setup = 5 s
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . payload setup = 5 s
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . stage-in = 0 s
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . payload execution = 19509 s
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . stage-out = 5 s
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | . log creation = 0 s
[2026-01-09 14:35:56] 2026-01-09 05:35:07,602 | INFO     | ..............................
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | 
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | job summary report
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | --------------------------------------------------
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | PanDA job id: 6963078203
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | task id: 47962010
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | errors: (none)
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | pilot state: finished 
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | transexitcode: 0
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | exeerrorcode: 0
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | exeerrordiag: 
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | exitcode: 0
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | exitmsg: OK
[2026-01-09 14:35:56] 2026-01-09 05:35:08,098 | INFO     | cpuconsumptiontime: 109637 s
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | nevents: 450
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | neventsw: 0
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | pid: 300589
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | pgrp: 300589
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | corecount: 6
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | event service: False
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | sizes: {0: 2284448, 1: 2284647, 5: 2284909, 11: 2284965, 19517: 2319140, 19523: 2328318, 19534: 2328508}
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | --------------------------------------------------
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | 
[2026-01-09 14:35:56] 2026-01-09 05:35:08,099 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-09 14:35:56] 2026-01-09 05:35:08,109 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,111 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:35:56] 2026-01-09 05:35:08,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,111 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:35:56] 2026-01-09 05:35:08,111 | INFO     | job 6963078203 has completed (purged errors)
[2026-01-09 14:35:56] 2026-01-09 05:35:08,111 | INFO     | overall cleanup function is called
[2026-01-09 14:35:56] 2026-01-09 05:35:09,121 | INFO     | --- collectZombieJob: --- 10, [300589]
[2026-01-09 14:35:56] 2026-01-09 05:35:09,122 | INFO     | zombie collector waiting for pid 300589
[2026-01-09 14:35:56] 2026-01-09 05:35:09,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:35:56] 2026-01-09 05:35:09,122 | INFO     | collected zombie processes
[2026-01-09 14:35:56] 2026-01-09 05:35:09,122 | INFO     | will attempt to kill all subprocesses of pid=300589
[2026-01-09 14:35:56] 2026-01-09 05:35:09,188 | INFO     | process IDs to be killed: [300589] (in reverse order)
[2026-01-09 14:35:56] 2026-01-09 05:35:09,215 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:35:56] 2026-01-09 05:35:09,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:35:56] 2026-01-09 05:35:09,218 | INFO     | did not find any defunct processes belonging to 300589
[2026-01-09 14:35:56] 2026-01-09 05:35:09,219 | INFO     | did not find any defunct processes belonging to 300589
[2026-01-09 14:35:56] 2026-01-09 05:35:09,219 | INFO     | ready for new job
[2026-01-09 14:35:56] 2026-01-09 05:35:09,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:35:56] 2026-01-09 05:35:09,220 | INFO     | ***************************************
[2026-01-09 14:35:56] 2026-01-09 05:35:09,221 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:35:56] 2026-01-09 05:35:09,221 | INFO     | ***************************************
[2026-01-09 14:35:56] 2026-01-09 05:35:09,221 | INFO     | 
[2026-01-09 14:35:56] 2026-01-09 05:35:09,221 | INFO     | architecture information:
[2026-01-09 14:35:56] 2026-01-09 05:35:09,222 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:35:56] 2026-01-09 05:35:09,229 | INFO     | cat /etc/os-release:
[2026-01-09 14:35:56] NAME="CentOS Linux"
[2026-01-09 14:35:56] VERSION="7 (Core)"
[2026-01-09 14:35:56] ID="centos"
[2026-01-09 14:35:56] ID_LIKE="rhel fedora"
[2026-01-09 14:35:56] VERSION_ID="7"
[2026-01-09 14:35:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:35:56] ANSI_COLOR="0;31"
[2026-01-09 14:35:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:35:56] HOME_URL="https://www.centos.org/"
[2026-01-09 14:35:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:35:56] 
[2026-01-09 14:35:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:35:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:35:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:35:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:35:56] 
[2026-01-09 14:35:56] 2026-01-09 05:35:09,229 | INFO     | ***************************************
[2026-01-09 14:35:56] 2026-01-09 05:35:09,731 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-09 14:35:56] 2026-01-09 05:35:09,740 | INFO     | sufficient remaining disk space (95286198272 B)
[2026-01-09 14:35:56] 2026-01-09 05:35:09,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:35:56] 2026-01-09 05:35:09,740 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:35:56] 2026-01-09 05:35:09,740 | INFO     | update_server=False
[2026-01-09 14:35:56] 2026-01-09 05:35:09,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:35:56] 2026-01-09 05:35:09,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:35:56] 2026-01-09 05:35:09,740 | INFO     | aborting loop
[2026-01-09 14:35:56] 2026-01-09 05:35:09,764 | INFO     | all data control threads have been joined
[2026-01-09 14:35:56] 2026-01-09 05:35:09,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:35:56] 2026-01-09 05:35:10,307 | INFO     | all job control threads have been joined
[2026-01-09 14:35:56] 2026-01-09 05:35:10,718 | INFO     | all payload control threads have been joined
[2026-01-09 14:35:56] 2026-01-09 05:35:10,745 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:10,745 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:10,769 | INFO     | [data] control thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:10,838 | INFO     | [job] validate thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,173 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,312 | INFO     | [job] control thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,358 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,413 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,561 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,723 | INFO     | [payload] control thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,857 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:11,994 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:12,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:35:56] 2026-01-09 05:35:12,107 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:12,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:35:56] 2026-01-09 05:35:13,681 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:16,050 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:20,776 | INFO     | job.realtimelogging is not enabled
[2026-01-09 14:35:56] 2026-01-09 05:35:21,781 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:35:56] 2026-01-09 05:35:40,356 | INFO     | PID=293885 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:35:56] 2026-01-09 05:35:40,356 | INFO     | .. there are 2 such processes running
[2026-01-09 14:35:56] 2026-01-09 05:35:40,356 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:35:56] 2026-01-09 05:35:40,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:35:56] 2026-01-09 05:35:40,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:35:56] 2026-01-09 05:35:51,228 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:35:56] 2026-01-09 05:35:51,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132303341376)>', '<ExcThread(monitor, started 140131931502336)>']
[2026-01-09 14:35:56] 2026-01-09 05:35:52,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:35:56] 2026-01-09 05:35:52,416 | INFO     | [monitor] control thread has ended
[2026-01-09 14:35:56] 2026-01-09 05:35:56,452 | INFO     | all workflow threads have been joined
[2026-01-09 14:35:56] 2026-01-09 05:35:56,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:35:56] 2026-01-09 05:35:56,453 | INFO     | traces error code: 0
[2026-01-09 14:35:56] 2026-01-09 05:35:56,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:35:56] 2026-01-09 05:35:56,522 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:35:56] 2026-01-09 05:35:56,523 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:35:56] 2026-01-09 05:35:56,524 [wrapper] pilotpid: 293885
[2026-01-09 14:35:56] 2026-01-09 05:35:56,526 [wrapper] Pilot exit status: 0
[2026-01-09 14:35:56] 2026-01-09 05:35:56,530 [wrapper] pandaids: 6963078203
[2026-01-09 14:35:56] 2026-01-09 05:35:56,545 [wrapper] cleanup supervisor_pilot  379480 293886
[2026-01-09 14:35:56] 2026-01-09 05:35:56,546 [wrapper] Test setup, not cleaning
[2026-01-09 14:35:56] 2026-01-09 05:35:56,548 [wrapper] apfmon messages muted
[2026-01-09 14:35:56] 2026-01-09 05:35:56,549 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:35:56] 2026-01-09 05:35:56,550 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:35:56]  *** Error codes and diagnostics ***
[2026-01-09 14:35:56]     "exeErrorCode": 0,
[2026-01-09 14:35:56]     "exeErrorDiag": "",
[2026-01-09 14:35:56]     "pilotErrorCode": 0,
[2026-01-09 14:35:56]     "pilotErrorDiag": "",
[2026-01-09 14:35:56]  *** Listing of results directory ***
[2026-01-09 14:35:56] total 784144
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:09 pilot3.tar.gz
[2026-01-09 14:35:56] -rwx------. 1 boinc boinc     36322 Jan  8 20:56 runpilot2-wrapper.sh
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:56 queuedata.json
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:35:56] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:09 run_atlas
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:09 job.xml
[2026-01-09 14:35:56] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:09 start_atlas.sh
[2026-01-09 14:35:56] drwxrwx--x. 2 boinc boinc        68 Jan  9 09:09 shared
[2026-01-09 14:35:56] -rw-r--r--. 2 boinc boinc    592611 Jan  9 09:09 input.tar.gz
[2026-01-09 14:35:56] -rw-r--r--. 2 boinc boinc 391066744 Jan  9 09:09 EVNT.47962006._000045.pool.root.1
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:09 boinc_lockfile
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc      2890 Jan  9 09:09 pandaJob.out
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc    989837 Jan  9 09:09 agis_schedconf.cvmfs.json
[2026-01-09 14:35:56] drwx------. 5 boinc boinc      4096 Jan  9 09:09 pilot3
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc      9352 Jan  9 12:16 init_data.xml
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc       532 Jan  9 14:23 boinc_task_state.xml
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc 399791088 Jan  9 14:34 HITS.47962010._000340.pool.root.1
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc      1031 Jan  9 14:34 memory_monitor_summary.json
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc   1516240 Jan  9 14:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc   1288705 Jan  9 14:34 log.47962010._000340.job.log.tgz.1
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc      8592 Jan  9 14:35 heartbeat.json
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc        95 Jan  9 14:35 pilot_heartbeat.json
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc      8192 Jan  9 14:35 boinc_mmap_file
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc        29 Jan  9 14:35 wrapper_checkpoint.txt
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc      4894 Jan  9 14:35 pilotlog.txt
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc   2812675 Jan  9 14:35 log.47962010._000340.job.log.1
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc       353 Jan  9 14:35 output.list
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc       620 Jan  9 14:35 runtime_log
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc   4116480 Jan  9 14:35 result.tar.gz
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc       648 Jan  9 14:35 WTYKDmBo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJGfKDmVaZC4m.diag
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc      8766 Jan  9 14:35 runtime_log.err
[2026-01-09 14:35:56] -rw-r--r--. 1 boinc boinc     20920 Jan  9 14:35 stderr.txt
[2026-01-09 14:35:56] HITS file was successfully produced:
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc 399791088 Jan  9 14:34 shared/HITS.pool.root.1
[2026-01-09 14:35:56]  *** Contents of shared directory: ***
[2026-01-09 14:35:56] total 776944
[2026-01-09 14:35:56] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:09 start_atlas.sh
[2026-01-09 14:35:56] -rw-r--r--. 2 boinc boinc    592611 Jan  9 09:09 input.tar.gz
[2026-01-09 14:35:56] -rw-r--r--. 2 boinc boinc 391066744 Jan  9 09:09 ATLAS.root_0
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc 399791088 Jan  9 14:34 HITS.pool.root.1
[2026-01-09 14:35:56] -rw-------. 1 boinc boinc   4116480 Jan  9 14:35 result.tar.gz
14:35:57 (290108): run_atlas exited; CPU time 109737.137746
14:35:57 (290108): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN