Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:19 (1070): wrapper (7.7.26015): starting
04:40:19 (1070): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 04:40:19] Arguments: --nthreads 8
[2026-01-09 04:40:19] Threads: 8
[2026-01-09 04:40:19] Checking for CVMFS
[2026-01-09 04:40:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:40:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:40:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:40:23] 2.11.2.0 25311 34885 101724 154929 3 100 17132733 25165824 1098 130560 0 13781767 99.722 11407263 2824 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 04:40:23] CVMFS is ok
[2026-01-09 04:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:40:23] Checking for apptainer binary...
[2026-01-09 04:40:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:40:23] Running /usr/bin/apptainer --version
[2026-01-09 04:40:23] apptainer version 1.3.2-1.el7
[2026-01-09 04:40:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:40:50] cg-vwn420.simple-grid.lan
[2026-01-09 04:40:50] apptainer works
[2026-01-09 04:40:50] Set ATHENA_PROC_NUMBER=8
[2026-01-09 04:40:50] Set ATHENA_CORE_NUMBER=8
[2026-01-09 04:40:50] Starting ATLAS job with PandaID=6963078200
[2026-01-09 04:40:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:21:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:21:58] 2026-01-09 10:21:12,851 | INFO     | job 6963078200 has state=finished
[2026-01-09 11:21:58] 2026-01-09 10:21:12,851 | INFO     | preparing for final server update for job 6963078200 in state='finished'
[2026-01-09 11:21:58] 2026-01-09 10:21:12,852 | INFO     | this job has now completed (state=finished)
[2026-01-09 11:21:58] 2026-01-09 10:21:12,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 11:21:58] 2026-01-09 10:21:12,852 | INFO     | log transfer has been attempted: DONE
[2026-01-09 11:21:58] 2026-01-09 10:21:12,852 | INFO     | job 6963078200 has finished - writing final server update
[2026-01-09 11:21:58] 2026-01-09 10:21:12,852 | INFO     | total number of processed events: 450 (read)
[2026-01-09 11:21:58] 2026-01-09 10:21:12,853 | INFO     | executing command: lscpu
[2026-01-09 11:21:58] 2026-01-09 10:21:12,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 11:21:58] 2026-01-09 10:21:14,068 | INFO     | monitor loop #1674: job 0:6963078200 is in state 'finished'
[2026-01-09 11:21:58] 2026-01-09 10:21:14,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:21:58] 2026-01-09 10:21:14,141 | INFO     | time since job start (23763s) is within the limit (174528.0s)
[2026-01-09 11:21:58] 2026-01-09 10:21:16,147 | INFO     | time since job start (23765s) is within the limit (174528.0s)
[2026-01-09 11:21:58] 2026-01-09 10:21:16,572 | INFO     | monitor loop #1675: job 0:6963078200 is in state 'finished'
[2026-01-09 11:21:58] 2026-01-09 10:21:16,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 11:21:58] 2026-01-09 10:21:18,153 | INFO     | time since job start (23767s) is within the limit (174528.0s)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,033 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:21:58] 2026-01-09 10:21:19,034 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 11:21:58] 2026-01-09 10:21:19,036 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6963078200/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,037 | INFO     | extracted standard info from prmon json
[2026-01-09 11:21:58] 2026-01-09 10:21:19,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:21:58] 2026-01-09 10:21:19,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:21:58] 2026-01-09 10:21:19,045 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:21:58] 2026-01-09 10:21:19,046 | INFO     | sum of square deviations: 17014683798.57624
[2026-01-09 11:21:58] 2026-01-09 10:21:19,051 | INFO     | sum of deviations: 790334925375.0261
[2026-01-09 11:21:58] 2026-01-09 10:21:19,051 | INFO     | mean x: 1767942451.6078947
[2026-01-09 11:21:58] 2026-01-09 10:21:19,051 | INFO     | mean y: 2582865.6578947366
[2026-01-09 11:21:58] 2026-01-09 10:21:19,052 | INFO     | intersect: -82118641489.73018
[2026-01-09 11:21:58] 2026-01-09 10:21:19,052 | INFO     | chi2: 25.765592892063065
[2026-01-09 11:21:58] 2026-01-09 10:21:19,053 | INFO     | sum of square deviations: 16351855968.51728
[2026-01-09 11:21:58] 2026-01-09 10:21:19,057 | INFO     | sum of deviations: 878654264484.3312
[2026-01-09 11:21:58] 2026-01-09 10:21:19,057 | INFO     | mean x: 1767942299.1093333
[2026-01-09 11:21:58] 2026-01-09 10:21:19,058 | INFO     | mean y: 2603144.162666667
[2026-01-09 11:21:58] 2026-01-09 10:21:19,058 | INFO     | intersect: -94996401462.1325
[2026-01-09 11:21:58] 2026-01-09 10:21:19,058 | INFO     | chi2: 23.78159951887642
[2026-01-09 11:21:58] 2026-01-09 10:21:19,059 | INFO     | current chi2=23.78159951887642 (change=7.700165804443038 %)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,059 | INFO     | right removable region: 374
[2026-01-09 11:21:58] 2026-01-09 10:21:19,059 | INFO     | sum of square deviations: 16351830958.517277
[2026-01-09 11:21:58] 2026-01-09 10:21:19,064 | INFO     | sum of deviations: 641140196057.1393
[2026-01-09 11:21:58] 2026-01-09 10:21:19,064 | INFO     | mean x: 1767942604.1093333
[2026-01-09 11:21:58] 2026-01-09 10:21:19,064 | INFO     | mean y: 2617191.8746666666
[2026-01-09 11:21:58] 2026-01-09 10:21:19,064 | INFO     | intersect: -69316780170.536
[2026-01-09 11:21:58] 2026-01-09 10:21:19,065 | INFO     | chi2: 19.52612080701576
[2026-01-09 11:21:58] 2026-01-09 10:21:19,065 | INFO     | current chi2=19.52612080701576 (change=24.216295395124927 %)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,065 | INFO     | left removable region: 10
[2026-01-09 11:21:58] 2026-01-09 10:21:19,066 | INFO     | sum of square deviations: 14954653774.381878
[2026-01-09 11:21:58] 2026-01-09 10:21:19,070 | INFO     | sum of deviations: 598714454068.4921
[2026-01-09 11:21:58] 2026-01-09 10:21:19,070 | INFO     | mean x: 1767942573.6126373
[2026-01-09 11:21:58] 2026-01-09 10:21:19,070 | INFO     | mean y: 2673342.414835165
[2026-01-09 11:21:58] 2026-01-09 10:21:19,070 | INFO     | intersect: -70777485714.0382
[2026-01-09 11:21:58] 2026-01-09 10:21:19,071 | INFO     | chi2: 12.250220711194487
[2026-01-09 11:21:58] 2026-01-09 10:21:19,071 | INFO     | current memory leak: 40.04 B/s (using 364 data points, chi2=12.25)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,072 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,072 | INFO     | ..............................
[2026-01-09 11:21:58] 2026-01-09 10:21:19,072 | INFO     | . Timing measurements:
[2026-01-09 11:21:58] 2026-01-09 10:21:19,072 | INFO     | . get job = 0 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,073 | INFO     | . initial setup = 7 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,073 | INFO     | . payload setup = 185 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,073 | INFO     | . stage-in = 0 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,073 | INFO     | . payload execution = 23350 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,073 | INFO     | . stage-out = 2 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,073 | INFO     | . log creation = 0 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,073 | INFO     | ..............................
[2026-01-09 11:21:58] 2026-01-09 10:21:19,599 | INFO     | 
[2026-01-09 11:21:58] 2026-01-09 10:21:19,599 | INFO     | job summary report
[2026-01-09 11:21:58] 2026-01-09 10:21:19,599 | INFO     | --------------------------------------------------
[2026-01-09 11:21:58] 2026-01-09 10:21:19,599 | INFO     | PanDA job id: 6963078200
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | task id: 47962010
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | errors: (none)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | pilot state: finished 
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | transexitcode: 0
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | exeerrorcode: 0
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | exeerrordiag: 
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | exitcode: 0
[2026-01-09 11:21:58] 2026-01-09 10:21:19,600 | INFO     | exitmsg: OK
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | cpuconsumptiontime: 164775 s
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | nevents: 450
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | neventsw: 0
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | pid: 11339
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | pgrp: 11339
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | corecount: 8
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | event service: False
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | sizes: {0: 2284392, 1: 2284647, 12: 2284647, 23: 2284675, 34: 2284703, 44: 2284731, 55: 2284887, 66: 2284915, 76: 2284943, 87: 2284999, 98: 2285027, 107: 2285597, 
[2026-01-09 11:21:58] 2026-01-09 10:21:19,601 | INFO     | --------------------------------------------------
[2026-01-09 11:21:58] 2026-01-09 10:21:19,602 | INFO     | 
[2026-01-09 11:21:58] 2026-01-09 10:21:19,602 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-09 11:21:58] 2026-01-09 10:21:19,637 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,637 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,637 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,637 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,639 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,639 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:21:58] 2026-01-09 10:21:19,639 | INFO     | job 6963078200 has completed (purged errors)
[2026-01-09 11:21:58] 2026-01-09 10:21:19,639 | INFO     | overall cleanup function is called
[2026-01-09 11:21:58] 2026-01-09 10:21:20,654 | INFO     | --- collectZombieJob: --- 10, [11339]
[2026-01-09 11:21:58] 2026-01-09 10:21:20,654 | INFO     | zombie collector waiting for pid 11339
[2026-01-09 11:21:58] 2026-01-09 10:21:20,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:21:58] 2026-01-09 10:21:20,655 | INFO     | collected zombie processes
[2026-01-09 11:21:58] 2026-01-09 10:21:20,655 | INFO     | will attempt to kill all subprocesses of pid=11339
[2026-01-09 11:21:58] 2026-01-09 10:21:20,715 | INFO     | process IDs to be killed: [11339] (in reverse order)
[2026-01-09 11:21:58] 2026-01-09 10:21:20,775 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:21:58] 2026-01-09 10:21:20,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:21:58] 2026-01-09 10:21:20,777 | INFO     | did not find any defunct processes belonging to 11339
[2026-01-09 11:21:58] 2026-01-09 10:21:20,778 | INFO     | did not find any defunct processes belonging to 11339
[2026-01-09 11:21:58] 2026-01-09 10:21:20,779 | INFO     | ready for new job
[2026-01-09 11:21:58] 2026-01-09 10:21:20,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:21:58] 2026-01-09 10:21:20,781 | INFO     | ***************************************
[2026-01-09 11:21:58] 2026-01-09 10:21:20,781 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:21:58] 2026-01-09 10:21:20,782 | INFO     | ***************************************
[2026-01-09 11:21:58] 2026-01-09 10:21:20,782 | INFO     | 
[2026-01-09 11:21:58] 2026-01-09 10:21:20,782 | INFO     | pilot is running in a VM
[2026-01-09 11:21:58] 2026-01-09 10:21:20,782 | INFO     | architecture information:
[2026-01-09 11:21:58] 2026-01-09 10:21:20,783 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:21:58] 2026-01-09 10:21:20,818 | INFO     | cat /etc/os-release:
[2026-01-09 11:21:58] NAME="CentOS Linux"
[2026-01-09 11:21:58] VERSION="7 (Core)"
[2026-01-09 11:21:58] ID="centos"
[2026-01-09 11:21:58] ID_LIKE="rhel fedora"
[2026-01-09 11:21:58] VERSION_ID="7"
[2026-01-09 11:21:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:21:58] ANSI_COLOR="0;31"
[2026-01-09 11:21:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:21:58] HOME_URL="https://www.centos.org/"
[2026-01-09 11:21:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:21:58] 
[2026-01-09 11:21:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:21:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:21:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:21:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:21:58] 
[2026-01-09 11:21:58] 2026-01-09 10:21:20,818 | INFO     | ***************************************
[2026-01-09 11:21:58] 2026-01-09 10:21:21,323 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-09 11:21:58] 2026-01-09 10:21:21,349 | INFO     | sufficient remaining disk space (497621663744 B)
[2026-01-09 11:21:58] 2026-01-09 10:21:21,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:21:58] 2026-01-09 10:21:21,349 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:21:58] 2026-01-09 10:21:21,349 | INFO     | update_server=False
[2026-01-09 11:21:58] 2026-01-09 10:21:21,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:21:58] 2026-01-09 10:21:21,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:21:58] 2026-01-09 10:21:21,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:21:58] 2026-01-09 10:21:21,525 | INFO     | all job control threads have been joined
[2026-01-09 11:21:58] 2026-01-09 10:21:21,585 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 11:21:58] 2026-01-09 10:21:21,586 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 11:21:58] 2026-01-09 10:21:21,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:21:58] 2026-01-09 10:21:21,586 | INFO     | will abort loop
[2026-01-09 11:21:58] 2026-01-09 10:21:21,825 | INFO     | all payload control threads have been joined
[2026-01-09 11:21:58] 2026-01-09 10:21:21,923 | INFO     | all data control threads have been joined
[2026-01-09 11:21:58] 2026-01-09 10:21:22,355 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,364 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,375 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,486 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,530 | INFO     | [job] control thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,592 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,830 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,831 | INFO     | [payload] control thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,832 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:22,928 | INFO     | [data] control thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:23,153 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:23,243 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:23,356 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:23,803 | INFO     | [job] validate thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:24,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:21:58] 2026-01-09 10:21:25,209 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:25,357 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:21:58] 2026-01-09 10:21:50,940 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:21:58] 2026-01-09 10:21:51,254 | INFO     | PID=4844 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 11:21:58] 2026-01-09 10:21:51,255 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:21:58] 2026-01-09 10:21:51,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:21:58] 2026-01-09 10:21:51,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:21:58] 2026-01-09 10:21:52,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355814209344)>', '<ExcThread(monitor, started 140355102045952)>']
[2026-01-09 11:21:58] 2026-01-09 10:21:53,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:21:58] 2026-01-09 10:21:53,266 | INFO     | [monitor] control thread has ended
[2026-01-09 11:21:58] 2026-01-09 10:21:57,799 | INFO     | all workflow threads have been joined
[2026-01-09 11:21:58] 2026-01-09 10:21:57,799 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:21:58] 2026-01-09 10:21:57,800 | INFO     | traces error code: 0
[2026-01-09 11:21:58] 2026-01-09 10:21:57,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:21:58] 2026-01-09 10:21:57,957 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:21:58] 2026-01-09 10:21:57,961 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:21:58] 2026-01-09 10:21:57,964 [wrapper] pilotpid: 4844
[2026-01-09 11:21:58] 2026-01-09 10:21:57,969 [wrapper] Pilot exit status: 0
[2026-01-09 11:21:58] 2026-01-09 10:21:57,984 [wrapper] pandaids: 6963078200
[2026-01-09 11:21:58] 2026-01-09 10:21:58,014 [wrapper] cleanup supervisor_pilot 14896 4845
[2026-01-09 11:21:58] 2026-01-09 10:21:58,022 [wrapper] Test setup, not cleaning
[2026-01-09 11:21:58] 2026-01-09 10:21:58,026 [wrapper] apfmon messages muted
[2026-01-09 11:21:58] 2026-01-09 10:21:58,030 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:21:58] 2026-01-09 10:21:58,034 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:21:58]  *** Error codes and diagnostics ***
[2026-01-09 11:21:58]     "exeErrorCode": 0,
[2026-01-09 11:21:58]     "exeErrorDiag": "",
[2026-01-09 11:21:58]     "pilotErrorCode": 0,
[2026-01-09 11:21:58]     "pilotErrorDiag": "",
[2026-01-09 11:21:58]  *** Listing of results directory ***
[2026-01-09 11:21:58] total 774056
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 11:21:58] -rwx------. 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:56 queuedata.json
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc       100 Jan  9 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:21:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 04:40 run_atlas
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc       105 Jan  9 04:40 job.xml
[2026-01-09 11:21:58] -rw-r--r--. 2 boinc boinc 391066744 Jan  9 04:40 EVNT.47962006._000045.pool.root.1
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc      6390 Jan  9 04:40 init_data.xml
[2026-01-09 11:21:58] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:40 start_atlas.sh
[2026-01-09 11:21:58] drwxrwx--x. 2 boinc boinc        68 Jan  9 04:40 shared
[2026-01-09 11:21:58] -rw-r--r--. 2 boinc boinc    592608 Jan  9 04:40 input.tar.gz
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc         0 Jan  9 04:40 boinc_lockfile
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc      2890 Jan  9 04:40 pandaJob.out
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc    989771 Jan  9 04:45 agis_schedconf.cvmfs.json
[2026-01-09 11:21:58] drwx------. 5 boinc boinc      4096 Jan  9 04:45 pilot3
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc       532 Jan  9 11:10 boinc_task_state.xml
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc 388176929 Jan  9 11:20 HITS.47962010._000337.pool.root.1
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc      1022 Jan  9 11:21 memory_monitor_summary.json
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc   1516240 Jan  9 11:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc   1572996 Jan  9 11:21 log.47962010._000337.job.log.tgz.1
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc      8617 Jan  9 11:21 heartbeat.json
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc      8192 Jan  9 11:21 boinc_mmap_file
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc        29 Jan  9 11:21 wrapper_checkpoint.txt
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc        95 Jan  9 11:21 pilot_heartbeat.json
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc      4994 Jan  9 11:21 pilotlog.txt
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc   3168190 Jan  9 11:21 log.47962010._000337.job.log.1
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc       353 Jan  9 11:21 output.list
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc       620 Jan  9 11:21 runtime_log
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc   4761600 Jan  9 11:21 result.tar.gz
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc       659 Jan  9 11:21 wXUKDmBo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGGfKDmOOvRmm.diag
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc      8817 Jan  9 11:21 runtime_log.err
[2026-01-09 11:21:58] -rw-r--r--. 1 boinc boinc     21291 Jan  9 11:21 stderr.txt
[2026-01-09 11:21:58] HITS file was successfully produced:
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc 388176929 Jan  9 11:20 shared/HITS.pool.root.1
[2026-01-09 11:21:58]  *** Contents of shared directory: ***
[2026-01-09 11:21:58] total 766232
[2026-01-09 11:21:58] -rw-r--r--. 2 boinc boinc 391066744 Jan  9 04:40 ATLAS.root_0
[2026-01-09 11:21:58] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:40 start_atlas.sh
[2026-01-09 11:21:58] -rw-r--r--. 2 boinc boinc    592608 Jan  9 04:40 input.tar.gz
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc 388176929 Jan  9 11:20 HITS.pool.root.1
[2026-01-09 11:21:58] -rw-------. 1 boinc boinc   4761600 Jan  9 11:21 result.tar.gz
11:21:59 (1070): run_atlas exited; CPU time 164836.300841
11:21:59 (1070): called boinc_finish(0)

</stderr_txt>
]]>

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