Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:16:03 (20164): wrapper (7.7.26015): starting
06:16:03 (20164): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:16:03] Arguments: --nthreads 8
[2026-01-09 06:16:03] Threads: 8
[2026-01-09 06:16:03] Checking for CVMFS
[2026-01-09 06:16:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:16:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:16:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:16:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:16:03] 2.11.2.0 3018 34960 103520 154933 1 56 17241225 25165824 0 130560 0 15601230 99.826 9936217 3389 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:16:03] CVMFS is ok
[2026-01-09 06:16:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:16:03] Checking for apptainer binary...
[2026-01-09 06:16:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:16:03] Running /usr/bin/apptainer --version
[2026-01-09 06:16:03] apptainer version 1.3.2-1.el7
[2026-01-09 06:16:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:16:05] cg-vwn451.simple-grid.lan
[2026-01-09 06:16:05] apptainer works
[2026-01-09 06:16:05] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:16:05] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:16:05] Starting ATLAS job with PandaID=6963077776
[2026-01-09 06:16:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:30:07]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:30:07] 2026-01-09 11:29:28,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,005 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:30:07] 2026-01-09 11:29:29,006 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 12:30:07] 2026-01-09 11:29:29,008 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-6963077776/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,009 | INFO     | extracted standard info from prmon json
[2026-01-09 12:30:07] 2026-01-09 11:29:29,009 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:30:07] 2026-01-09 11:29:29,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:30:07] 2026-01-09 11:29:29,017 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:30:07] 2026-01-09 11:29:29,018 | INFO     | sum of square deviations: 15327544964.027258
[2026-01-09 12:30:07] 2026-01-09 11:29:29,022 | INFO     | sum of deviations: 113198233294.7819
[2026-01-09 12:30:07] 2026-01-09 11:29:29,022 | INFO     | mean x: 1767946985.188011
[2026-01-09 12:30:07] 2026-01-09 11:29:29,022 | INFO     | mean y: 2743518.4959128066
[2026-01-09 12:30:07] 2026-01-09 11:29:29,023 | INFO     | intersect: -13054042532.486628
[2026-01-09 12:30:07] 2026-01-09 11:29:29,023 | INFO     | chi2: 6.227990610968425
[2026-01-09 12:30:07] 2026-01-09 11:29:29,024 | INFO     | sum of square deviations: 14709591631.348011
[2026-01-09 12:30:07] 2026-01-09 11:29:29,028 | INFO     | sum of deviations: 230106068614.15485
[2026-01-09 12:30:07] 2026-01-09 11:29:29,028 | INFO     | mean x: 1767946832.6906078
[2026-01-09 12:30:07] 2026-01-09 11:29:29,028 | INFO     | mean y: 2772327.7513812156
[2026-01-09 12:30:07] 2026-01-09 11:29:29,029 | INFO     | intersect: -27653691929.37372
[2026-01-09 12:30:07] 2026-01-09 11:29:29,029 | INFO     | chi2: 2.8889195558147254
[2026-01-09 12:30:07] 2026-01-09 11:29:29,029 | INFO     | current chi2=2.8889195558147254 (change=53.61393848720798 %)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,030 | INFO     | sum of square deviations: 14108475823.663877
[2026-01-09 12:30:07] 2026-01-09 11:29:29,034 | INFO     | sum of deviations: 263167231116.5713
[2026-01-09 12:30:07] 2026-01-09 11:29:29,034 | INFO     | mean x: 1767946680.1932774
[2026-01-09 12:30:07] 2026-01-09 11:29:29,034 | INFO     | mean y: 2780692.238095238
[2026-01-09 12:30:07] 2026-01-09 11:29:29,034 | INFO     | intersect: -32974958250.179626
[2026-01-09 12:30:07] 2026-01-09 11:29:29,035 | INFO     | chi2: 2.5313392581109193
[2026-01-09 12:30:07] 2026-01-09 11:29:29,035 | INFO     | current chi2=2.5313392581109193 (change=12.377648141294893 %)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,035 | INFO     | right removable region: 356
[2026-01-09 12:30:07] 2026-01-09 11:29:29,036 | INFO     | sum of square deviations: 14709549541.348024
[2026-01-09 12:30:07] 2026-01-09 11:29:29,040 | INFO     | sum of deviations: 9952719728.386738
[2026-01-09 12:30:07] 2026-01-09 11:29:29,040 | INFO     | mean x: 1767947137.6906078
[2026-01-09 12:30:07] 2026-01-09 11:29:29,040 | INFO     | mean y: 2768942.8784530386
[2026-01-09 12:30:07] 2026-01-09 11:29:29,040 | INFO     | intersect: -1193452756.9483685
[2026-01-09 12:30:07] 2026-01-09 11:29:29,041 | INFO     | chi2: 3.8504639598111057
[2026-01-09 12:30:07] 2026-01-09 11:29:29,041 | INFO     | current chi2=3.8504639598111057 (change=38.174859271144996 %)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,041 | INFO     | sum of square deviations: 14108413481.04766
[2026-01-09 12:30:07] 2026-01-09 11:29:29,045 | INFO     | sum of deviations: -7269592825.714302
[2026-01-09 12:30:07] 2026-01-09 11:29:29,046 | INFO     | mean x: 1767947290.1904762
[2026-01-09 12:30:07] 2026-01-09 11:29:29,046 | INFO     | mean y: 2773307.2016806724
[2026-01-09 12:30:07] 2026-01-09 11:29:29,046 | INFO     | intersect: 913737318.4474969
[2026-01-09 12:30:07] 2026-01-09 11:29:29,046 | INFO     | chi2: 3.8063799609824884
[2026-01-09 12:30:07] 2026-01-09 11:29:29,047 | INFO     | current chi2=3.8063799609824884 (change=1.1449009596957738 %)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,047 | INFO     | left removable region: 20
[2026-01-09 12:30:07] 2026-01-09 11:29:29,048 | INFO     | sum of square deviations: 11762281316.639908
[2026-01-09 12:30:07] 2026-01-09 11:29:29,051 | INFO     | sum of deviations: 126023952826.87204
[2026-01-09 12:30:07] 2026-01-09 11:29:29,052 | INFO     | mean x: 1767947259.6994047
[2026-01-09 12:30:07] 2026-01-09 11:29:29,052 | INFO     | mean y: 2816260.8601190476
[2026-01-09 12:30:07] 2026-01-09 11:29:29,052 | INFO     | intersect: -18939402179.499634
[2026-01-09 12:30:07] 2026-01-09 11:29:29,052 | INFO     | chi2: 0.04457239072447277
[2026-01-09 12:30:07] 2026-01-09 11:29:29,053 | INFO     | current memory leak: 10.71 B/s (using 336 data points, chi2=0.04)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,053 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,053 | INFO     | ..............................
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . Timing measurements:
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . get job = 0 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . initial setup = 2 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . payload setup = 10 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . stage-in = 0 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . payload execution = 22338 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . stage-out = 2 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | . log creation = 0 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,054 | INFO     | ..............................
[2026-01-09 12:30:07] 2026-01-09 11:29:29,459 | INFO     | 
[2026-01-09 12:30:07] 2026-01-09 11:29:29,459 | INFO     | job summary report
[2026-01-09 12:30:07] 2026-01-09 11:29:29,459 | INFO     | --------------------------------------------------
[2026-01-09 12:30:07] 2026-01-09 11:29:29,459 | INFO     | PanDA job id: 6963077776
[2026-01-09 12:30:07] 2026-01-09 11:29:29,459 | INFO     | task id: 47962010
[2026-01-09 12:30:07] 2026-01-09 11:29:29,459 | INFO     | errors: (none)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,459 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | pilot state: finished 
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | transexitcode: 0
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | exeerrorcode: 0
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | exeerrordiag: 
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | exitcode: 0
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | exitmsg: OK
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | cpuconsumptiontime: 172594 s
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | nevents: 450
[2026-01-09 12:30:07] 2026-01-09 11:29:29,460 | INFO     | neventsw: 0
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | pid: 30309
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | pgrp: 30309
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | corecount: 8
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | event service: False
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | sizes: {0: 2284449, 1: 2284648, 8: 2284910, 12: 2284938, 22352: 2319589, 22356: 2328585, 22358: 2328769, 22367: 2329015}
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | --------------------------------------------------
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | 
[2026-01-09 12:30:07] 2026-01-09 11:29:29,461 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-01-09 12:30:07] 2026-01-09 11:29:29,485 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,487 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,488 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:30:07] 2026-01-09 11:29:29,488 | INFO     | job 6963077776 has completed (purged errors)
[2026-01-09 12:30:07] 2026-01-09 11:29:29,488 | INFO     | overall cleanup function is called
[2026-01-09 12:30:07] 2026-01-09 11:29:30,502 | INFO     | --- collectZombieJob: --- 10, [30309]
[2026-01-09 12:30:07] 2026-01-09 11:29:30,502 | INFO     | zombie collector waiting for pid 30309
[2026-01-09 12:30:07] 2026-01-09 11:29:30,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:30:07] 2026-01-09 11:29:30,503 | INFO     | collected zombie processes
[2026-01-09 12:30:07] 2026-01-09 11:29:30,503 | INFO     | will attempt to kill all subprocesses of pid=30309
[2026-01-09 12:30:07] 2026-01-09 11:29:30,567 | INFO     | process IDs to be killed: [30309] (in reverse order)
[2026-01-09 12:30:07] 2026-01-09 11:29:30,613 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:30:07] 2026-01-09 11:29:30,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:30:07] 2026-01-09 11:29:30,615 | INFO     | did not find any defunct processes belonging to 30309
[2026-01-09 12:30:07] 2026-01-09 11:29:30,617 | INFO     | did not find any defunct processes belonging to 30309
[2026-01-09 12:30:07] 2026-01-09 11:29:30,617 | INFO     | ready for new job
[2026-01-09 12:30:07] 2026-01-09 11:29:30,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:30:07] 2026-01-09 11:29:30,619 | INFO     | ***************************************
[2026-01-09 12:30:07] 2026-01-09 11:29:30,620 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:30:07] 2026-01-09 11:29:30,620 | INFO     | ***************************************
[2026-01-09 12:30:07] 2026-01-09 11:29:30,620 | INFO     | 
[2026-01-09 12:30:07] 2026-01-09 11:29:30,620 | INFO     | pilot is running in a VM
[2026-01-09 12:30:07] 2026-01-09 11:29:30,621 | INFO     | architecture information:
[2026-01-09 12:30:07] 2026-01-09 11:29:30,621 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:30:07] 2026-01-09 11:29:30,639 | INFO     | cat /etc/os-release:
[2026-01-09 12:30:07] NAME="CentOS Linux"
[2026-01-09 12:30:07] VERSION="7 (Core)"
[2026-01-09 12:30:07] ID="centos"
[2026-01-09 12:30:07] ID_LIKE="rhel fedora"
[2026-01-09 12:30:07] VERSION_ID="7"
[2026-01-09 12:30:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:30:07] ANSI_COLOR="0;31"
[2026-01-09 12:30:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:30:07] HOME_URL="https://www.centos.org/"
[2026-01-09 12:30:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:30:07] 
[2026-01-09 12:30:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:30:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:30:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:30:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:30:07] 
[2026-01-09 12:30:07] 2026-01-09 11:29:30,640 | INFO     | ***************************************
[2026-01-09 12:30:07] 2026-01-09 11:29:31,143 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-01-09 12:30:07] 2026-01-09 11:29:31,162 | INFO     | sufficient remaining disk space (497528340480 B)
[2026-01-09 12:30:07] 2026-01-09 11:29:31,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:30:07] 2026-01-09 11:29:31,163 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:30:07] 2026-01-09 11:29:31,163 | INFO     | update_server=False
[2026-01-09 12:30:07] 2026-01-09 11:29:31,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:30:07] 2026-01-09 11:29:31,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:30:07] 2026-01-09 11:29:31,164 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:30:07] 2026-01-09 11:29:31,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:30:07] 2026-01-09 11:29:31,252 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 12:30:07] 2026-01-09 11:29:31,252 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 12:30:07] 2026-01-09 11:29:31,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:30:07] 2026-01-09 11:29:31,252 | INFO     | will abort loop
[2026-01-09 12:30:07] 2026-01-09 11:29:31,256 | INFO     | all job control threads have been joined
[2026-01-09 12:30:07] 2026-01-09 11:29:31,263 | INFO     | all payload control threads have been joined
[2026-01-09 12:30:07] 2026-01-09 11:29:31,891 | INFO     | all data control threads have been joined
[2026-01-09 12:30:07] 2026-01-09 11:29:32,165 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,169 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,258 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,262 | INFO     | [job] control thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,269 | INFO     | [payload] control thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,318 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,844 | INFO     | [job] validate thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,897 | INFO     | [data] control thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:32,913 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:33,017 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:33,117 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:33,171 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:33,184 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:33,645 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:35,170 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:29:41,591 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:30:07] 2026-01-09 11:29:42,596 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:30:07] 2026-01-09 11:30:00,126 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:30:07] 2026-01-09 11:30:01,268 | INFO     | PID=23881 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 12:30:07] 2026-01-09 11:30:01,269 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:30:07] 2026-01-09 11:30:01,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:30:07] 2026-01-09 11:30:01,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:30:07] 2026-01-09 11:30:02,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770905347904)>', '<ExcThread(monitor, started 139770097293056)>']
[2026-01-09 12:30:07] 2026-01-09 11:30:02,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:30:07] 2026-01-09 11:30:02,275 | INFO     | [monitor] control thread has ended
[2026-01-09 12:30:07] 2026-01-09 11:30:07,185 | INFO     | all workflow threads have been joined
[2026-01-09 12:30:07] 2026-01-09 11:30:07,185 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:30:07] 2026-01-09 11:30:07,186 | INFO     | traces error code: 0
[2026-01-09 12:30:07] 2026-01-09 11:30:07,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:30:07] 2026-01-09 11:30:07,331 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:30:07] 2026-01-09 11:30:07,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:30:07] 2026-01-09 11:30:07,339 [wrapper] pilotpid: 23881
[2026-01-09 12:30:07] 2026-01-09 11:30:07,343 [wrapper] Pilot exit status: 0
[2026-01-09 12:30:07] 2026-01-09 11:30:07,361 [wrapper] pandaids: 6963077776
[2026-01-09 12:30:07] 2026-01-09 11:30:07,395 [wrapper] cleanup supervisor_pilot 31083 23882
[2026-01-09 12:30:07] 2026-01-09 11:30:07,399 [wrapper] Test setup, not cleaning
[2026-01-09 12:30:07] 2026-01-09 11:30:07,403 [wrapper] apfmon messages muted
[2026-01-09 12:30:07] 2026-01-09 11:30:07,406 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:30:07] 2026-01-09 11:30:07,409 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:30:07]  *** Error codes and diagnostics ***
[2026-01-09 12:30:07]     "exeErrorCode": 0,
[2026-01-09 12:30:07]     "exeErrorDiag": "",
[2026-01-09 12:30:07]     "pilotErrorCode": 0,
[2026-01-09 12:30:07]     "pilotErrorDiag": "",
[2026-01-09 12:30:07]  *** Listing of results directory ***
[2026-01-09 12:30:07] total 793224
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:56 queuedata.json
[2026-01-09 12:30:07] -rwx------. 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:30:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:16 run_atlas
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:16 job.xml
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc      6391 Jan  9 06:16 init_data.xml
[2026-01-09 12:30:07] -rw-r--r--. 2 boinc boinc 392998403 Jan  9 06:16 EVNT.47962006._000042.pool.root.1
[2026-01-09 12:30:07] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:16 start_atlas.sh
[2026-01-09 12:30:07] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:16 shared
[2026-01-09 12:30:07] -rw-r--r--. 2 boinc boinc    592607 Jan  9 06:16 input.tar.gz
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:16 boinc_lockfile
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc      2890 Jan  9 06:16 pandaJob.out
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc    989771 Jan  9 06:16 agis_schedconf.cvmfs.json
[2026-01-09 12:30:07] drwx------. 5 boinc boinc      4096 Jan  9 06:16 pilot3
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc       533 Jan  9 12:19 boinc_task_state.xml
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc 406282716 Jan  9 12:28 HITS.47962010._000274.pool.root.1
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc      1022 Jan  9 12:29 memory_monitor_summary.json
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc        95 Jan  9 12:29 pilot_heartbeat.json
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc   1516240 Jan  9 12:29 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc   1552365 Jan  9 12:29 log.47962010._000274.job.log.tgz.1
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc      8612 Jan  9 12:29 heartbeat.json
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc      8192 Jan  9 12:29 boinc_mmap_file
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc        29 Jan  9 12:29 wrapper_checkpoint.txt
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc      5068 Jan  9 12:30 pilotlog.txt
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc   2987130 Jan  9 12:30 log.47962010._000274.job.log.1
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc       353 Jan  9 12:30 output.list
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc       620 Jan  9 12:30 runtime_log
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc   4556800 Jan  9 12:30 result.tar.gz
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc      8833 Jan  9 12:30 runtime_log.err
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc       659 Jan  9 12:30 6jHNDmBo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdUkKDm91YyWm.diag
[2026-01-09 12:30:07] -rw-r--r--. 1 boinc boinc     20860 Jan  9 12:30 stderr.txt
[2026-01-09 12:30:07] HITS file was successfully produced:
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc 406282716 Jan  9 12:28 shared/HITS.pool.root.1
[2026-01-09 12:30:07]  *** Contents of shared directory: ***
[2026-01-09 12:30:07] total 785600
[2026-01-09 12:30:07] -rw-r--r--. 2 boinc boinc 392998403 Jan  9 06:16 ATLAS.root_0
[2026-01-09 12:30:07] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:16 start_atlas.sh
[2026-01-09 12:30:07] -rw-r--r--. 2 boinc boinc    592607 Jan  9 06:16 input.tar.gz
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc 406282716 Jan  9 12:28 HITS.pool.root.1
[2026-01-09 12:30:07] -rw-------. 1 boinc boinc   4556800 Jan  9 12:30 result.tar.gz
12:30:08 (20164): run_atlas exited; CPU time 172582.969013
12:30:08 (20164): called boinc_finish(0)

</stderr_txt>
]]>

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