Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:57 (881375): wrapper (7.7.26015): starting
00:02:57 (881375): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:02:57] Arguments: --nthreads 8
[2026-01-09 00:02:57] Threads: 8
[2026-01-09 00:02:57] Checking for CVMFS
[2026-01-09 00:02:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:02:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:02:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:03:00] 2.13.3.0 8593 19307 228312 154931 0 211 37973769 39288833 11181 16776704 0 17922051 99.754 32231678 30380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 00:03:00] CVMFS is ok
[2026-01-09 00:03:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:03:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:03:00] Further information can be found at the LHC@home message board.
[2026-01-09 00:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:03:00] Checking for apptainer binary...
[2026-01-09 00:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:03:00] Running /usr/bin/apptainer --version
[2026-01-09 00:03:01] apptainer version 1.4.5-2.el9
[2026-01-09 00:03:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:03:02] c-211-25.aglt2.org
[2026-01-09 00:03:02] apptainer works
[2026-01-09 00:03:02] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:03:02] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:03:03] Starting ATLAS job with PandaID=6963153093
[2026-01-09 00:03:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:56:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:56:25] 2026-01-10 04:55:13,706 | INFO     | time since job start (85803s) is within the limit (349056.0s)
[2026-01-09 23:56:25] 2026-01-10 04:55:14,172 | INFO     | sum of deviations: 1395348816684.1587
[2026-01-09 23:56:25] 2026-01-10 04:55:14,172 | INFO     | mean x: 1767978088.6747503
[2026-01-09 23:56:25] 2026-01-10 04:55:14,172 | INFO     | mean y: 2504047.6626248215
[2026-01-09 23:56:25] 2026-01-10 04:55:14,172 | INFO     | intersect: -2884520944.9378715
[2026-01-09 23:56:25] 2026-01-10 04:55:14,174 | INFO     | chi2: 11.364679641910636
[2026-01-09 23:56:25] 2026-01-10 04:55:14,196 | INFO     | sum of square deviations: 845384762577.2615
[2026-01-09 23:56:25] 2026-01-10 04:55:14,438 | INFO     | sum of deviations: 1838287551276.9954
[2026-01-09 23:56:25] 2026-01-10 04:55:14,438 | INFO     | mean x: 1767977936.1789548
[2026-01-09 23:56:25] 2026-01-10 04:55:14,438 | INFO     | mean y: 2511462.6800286327
[2026-01-09 23:56:25] 2026-01-10 04:55:14,439 | INFO     | intersect: -3841953182.154563
[2026-01-09 23:56:25] 2026-01-10 04:55:14,440 | INFO     | chi2: 7.90851200585476
[2026-01-09 23:56:25] 2026-01-10 04:55:14,441 | INFO     | current chi2=7.90851200585476 (change=30.41148316500035 %)
[2026-01-09 23:56:25] 2026-01-10 04:55:14,454 | INFO     | sum of square deviations: 836340124884.0164
[2026-01-09 23:56:25] 2026-01-10 04:55:14,804 | INFO     | sum of deviations: 1926681942581.0254
[2026-01-09 23:56:25] 2026-01-10 04:55:14,804 | INFO     | mean x: 1767977783.681753
[2026-01-09 23:56:25] 2026-01-10 04:55:14,805 | INFO     | mean y: 2512948.2844827585
[2026-01-09 23:56:25] 2026-01-10 04:55:14,805 | INFO     | intersect: -4070388457.9184604
[2026-01-09 23:56:25] 2026-01-10 04:55:14,833 | INFO     | chi2: 7.094359871390748
[2026-01-09 23:56:25] 2026-01-10 04:55:14,833 | INFO     | current chi2=7.094359871390748 (change=10.294631074230985 %)
[2026-01-09 23:56:25] 2026-01-10 04:55:14,833 | INFO     | right removable region: 1391
[2026-01-09 23:56:25] 2026-01-10 04:55:14,853 | INFO     | sum of square deviations: 845383843308.6177
[2026-01-09 23:56:25] 2026-01-10 04:55:15,755 | INFO     | sum of deviations: 919978319130.6354
[2026-01-09 23:56:25] 2026-01-10 04:55:15,756 | INFO     | mean x: 1767978241.178239
[2026-01-09 23:56:25] 2026-01-10 04:55:15,756 | INFO     | mean y: 2512003.5998568363
[2026-01-09 23:56:25] 2026-01-10 04:55:15,756 | INFO     | intersect: -1921468048.127864
[2026-01-09 23:56:25] 2026-01-10 04:55:15,885 | INFO     | time since job start (85805s) is within the limit (349056.0s)
[2026-01-09 23:56:25] 2026-01-10 04:55:15,923 | INFO     | chi2: 7.339359505129488
[2026-01-09 23:56:25] 2026-01-10 04:55:15,923 | INFO     | current chi2=7.339359505129488 (change=35.41956538692549 %)
[2026-01-09 23:56:25] 2026-01-10 04:55:15,925 | INFO     | sum of square deviations: 836338457144.0157
[2026-01-09 23:56:25] 2026-01-10 04:55:16,033 | INFO     | monitor loop #3762: job 0:6963153093 is in state 'finished'
[2026-01-09 23:56:25] 2026-01-10 04:55:16,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:56:25] 2026-01-10 04:55:17,069 | INFO     | sum of deviations: 573618705025.0681
[2026-01-09 23:56:25] 2026-01-10 04:55:17,070 | INFO     | mean x: 1767978393.681753
[2026-01-09 23:56:25] 2026-01-10 04:55:17,070 | INFO     | mean y: 2517842.2191091953
[2026-01-09 23:56:25] 2026-01-10 04:55:17,070 | INFO     | intersect: -1210083907.7460885
[2026-01-09 23:56:25] 2026-01-10 04:55:17,098 | INFO     | chi2: 5.265503855268215
[2026-01-09 23:56:25] 2026-01-10 04:55:17,099 | INFO     | current chi2=5.265503855268215 (change=28.25662986547876 %)
[2026-01-09 23:56:25] 2026-01-10 04:55:17,170 | INFO     | sum of square deviations: 827358240084.2146
[2026-01-09 23:56:25] 2026-01-10 04:55:17,516 | INFO     | sum of deviations: 402045189450.49817
[2026-01-09 23:56:25] 2026-01-10 04:55:17,517 | INFO     | mean x: 1767978546.181687
[2026-01-09 23:56:25] 2026-01-10 04:55:17,517 | INFO     | mean y: 2520754.7440519105
[2026-01-09 23:56:25] 2026-01-10 04:55:17,517 | INFO     | intersect: -856608018.1460103
[2026-01-09 23:56:25] 2026-01-10 04:55:17,590 | INFO     | chi2: 4.7484528948802565
[2026-01-09 23:56:25] 2026-01-10 04:55:17,591 | INFO     | current chi2=4.7484528948802565 (change=9.819591336366443 %)
[2026-01-09 23:56:25] 2026-01-10 04:55:17,591 | INFO     | left removable region: 30
[2026-01-09 23:56:25] 2026-01-10 04:55:17,593 | INFO     | sum of square deviations: 781697299754.7107
[2026-01-09 23:56:25] 2026-01-10 04:55:17,697 | INFO     | sum of deviations: 689537255435.6377
[2026-01-09 23:56:25] 2026-01-10 04:55:17,697 | INFO     | mean x: 1767978668.1844232
[2026-01-09 23:56:25] 2026-01-10 04:55:17,697 | INFO     | mean y: 2534108.79426892
[2026-01-09 23:56:25] 2026-01-10 04:55:17,697 | INFO     | intersect: -1557004550.110117
[2026-01-09 23:56:25] 2026-01-10 04:55:17,699 | INFO     | chi2: 0.07079454214336887
[2026-01-09 23:56:25] 2026-01-10 04:55:17,700 | INFO     | current memory leak: 0.88 B/s (using 1361 data points, chi2=0.07)
[2026-01-09 23:56:25] 2026-01-10 04:55:17,701 | INFO     | could have reported an average CPU frequency of 2900 MHz (49 samples)
[2026-01-09 23:56:25] 2026-01-10 04:55:17,702 | INFO     | ..............................
[2026-01-09 23:56:25] 2026-01-10 04:55:17,702 | INFO     | . Timing measurements:
[2026-01-09 23:56:25] 2026-01-10 04:55:17,702 | INFO     | . get job = 0 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,702 | INFO     | . initial setup = 15 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,702 | INFO     | . payload setup = 74 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,703 | INFO     | . stage-in = 0 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,703 | INFO     | . payload execution = 85554 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,703 | INFO     | . stage-out = 12 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,703 | INFO     | . log creation = 2 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,703 | INFO     | ..............................
[2026-01-09 23:56:25] 2026-01-10 04:55:17,847 | INFO     | 
[2026-01-09 23:56:25] 2026-01-10 04:55:17,920 | INFO     | job summary report
[2026-01-09 23:56:25] 2026-01-10 04:55:17,920 | INFO     | --------------------------------------------------
[2026-01-09 23:56:25] 2026-01-10 04:55:17,920 | INFO     | PanDA job id: 6963153093
[2026-01-09 23:56:25] 2026-01-10 04:55:17,920 | INFO     | task id: 47898826
[2026-01-09 23:56:25] 2026-01-10 04:55:17,920 | INFO     | errors: (none)
[2026-01-09 23:56:25] 2026-01-10 04:55:17,921 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:56:25] 2026-01-10 04:55:17,921 | INFO     | pilot state: finished 
[2026-01-09 23:56:25] 2026-01-10 04:55:17,921 | INFO     | transexitcode: 0
[2026-01-09 23:56:25] 2026-01-10 04:55:17,921 | INFO     | exeerrorcode: 0
[2026-01-09 23:56:25] 2026-01-10 04:55:17,921 | INFO     | exeerrordiag: 
[2026-01-09 23:56:25] 2026-01-10 04:55:17,921 | INFO     | exitcode: 0
[2026-01-09 23:56:25] 2026-01-10 04:55:17,922 | INFO     | exitmsg: OK
[2026-01-09 23:56:25] 2026-01-10 04:55:17,922 | INFO     | cpuconsumptiontime: 114871 s
[2026-01-09 23:56:25] 2026-01-10 04:55:17,922 | INFO     | nevents: 400
[2026-01-09 23:56:25] 2026-01-10 04:55:17,923 | INFO     | neventsw: 0
[2026-01-09 23:56:25] 2026-01-10 04:55:17,923 | INFO     | pid: 937195
[2026-01-09 23:56:25] 2026-01-10 04:55:17,923 | INFO     | pgrp: 937195
[2026-01-09 23:56:25] 2026-01-10 04:55:17,923 | INFO     | corecount: 8
[2026-01-09 23:56:25] 2026-01-10 04:55:17,923 | INFO     | event service: False
[2026-01-09 23:56:25] 2026-01-10 04:55:17,923 | INFO     | sizes: {0: 2283142, 1: 2283743, 2: 2283827, 3: 2283855, 4: 2283883, 5: 2284082, 6: 2284266, 17: 2284294, 29: 2284322, 40: 2284350, 54: 2284378, 63: 2284948, 65: 22
[2026-01-09 23:56:25] 2026-01-10 04:55:17,923 | INFO     | --------------------------------------------------
[2026-01-09 23:56:25] 2026-01-10 04:55:17,924 | INFO     | 
[2026-01-09 23:56:25] 2026-01-10 04:55:17,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 23:56:25] 2026-01-10 04:55:17,922 | INFO     | time since job start (85807s) is within the limit (349056.0s)
[2026-01-09 23:56:25] 2026-01-10 04:55:18,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,011 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:56:25] 2026-01-10 04:55:18,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,012 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:56:25] 2026-01-10 04:55:18,012 | INFO     | job 6963153093 has completed (purged errors)
[2026-01-09 23:56:25] 2026-01-10 04:55:18,012 | INFO     | overall cleanup function is called
[2026-01-09 23:56:25] 2026-01-10 04:55:19,022 | INFO     | --- collectZombieJob: --- 10, [937195]
[2026-01-09 23:56:25] 2026-01-10 04:55:19,022 | INFO     | zombie collector waiting for pid 937195
[2026-01-09 23:56:25] 2026-01-10 04:55:19,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:56:25] 2026-01-10 04:55:19,023 | INFO     | collected zombie processes
[2026-01-09 23:56:25] 2026-01-10 04:55:19,023 | INFO     | will attempt to kill all subprocesses of pid=937195
[2026-01-09 23:56:25] 2026-01-10 04:55:26,712 | INFO     | process IDs to be killed: [937195] (in reverse order)
[2026-01-09 23:56:25] 2026-01-10 04:55:27,278 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:56:25] 2026-01-10 04:55:27,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:56:25] 2026-01-10 04:55:27,305 | INFO     | did not find any defunct processes belonging to 937195
[2026-01-09 23:56:25] 2026-01-10 04:55:27,483 | INFO     | did not find any defunct processes belonging to 937195
[2026-01-09 23:56:25] 2026-01-10 04:55:27,483 | INFO     | ready for new job
[2026-01-09 23:56:25] 2026-01-10 04:55:27,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:56:25] 2026-01-10 04:55:27,552 | INFO     | ***************************************
[2026-01-09 23:56:25] 2026-01-10 04:55:27,553 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:56:25] 2026-01-10 04:55:27,553 | INFO     | ***************************************
[2026-01-09 23:56:25] 2026-01-10 04:55:27,553 | INFO     | 
[2026-01-09 23:56:25] 2026-01-10 04:55:27,579 | INFO     | architecture information:
[2026-01-09 23:56:25] 2026-01-10 04:55:27,590 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:56:25] 2026-01-10 04:55:27,657 | INFO     | cat /etc/os-release:
[2026-01-09 23:56:25] NAME="CentOS Linux"
[2026-01-09 23:56:25] VERSION="7 (Core)"
[2026-01-09 23:56:25] ID="centos"
[2026-01-09 23:56:25] ID_LIKE="rhel fedora"
[2026-01-09 23:56:25] VERSION_ID="7"
[2026-01-09 23:56:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:56:25] ANSI_COLOR="0;31"
[2026-01-09 23:56:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:56:25] HOME_URL="https://www.centos.org/"
[2026-01-09 23:56:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:56:25] 
[2026-01-09 23:56:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:56:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:56:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:56:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:56:25] 
[2026-01-09 23:56:25] 2026-01-10 04:55:27,658 | INFO     | ***************************************
[2026-01-09 23:56:25] 2026-01-10 04:55:28,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 23:56:25] 2026-01-10 04:55:28,270 | INFO     | sufficient remaining disk space (52122615808 B)
[2026-01-09 23:56:25] 2026-01-10 04:55:28,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:56:25] 2026-01-10 04:55:28,271 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:56:25] 2026-01-10 04:55:28,271 | INFO     | update_server=False
[2026-01-09 23:56:25] 2026-01-10 04:55:28,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:56:25] 2026-01-10 04:55:28,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:56:25] 2026-01-10 04:55:28,272 | INFO     | aborting loop
[2026-01-09 23:56:25] 2026-01-10 04:55:28,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:56:25] 2026-01-10 04:55:28,666 | INFO     | all job control threads have been joined
[2026-01-09 23:56:25] 2026-01-10 04:55:29,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:56:25] 2026-01-10 04:55:29,137 | INFO     | all payload control threads have been joined
[2026-01-09 23:56:25] 2026-01-10 04:55:29,276 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:29,280 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:29,368 | INFO     | all data control threads have been joined
[2026-01-09 23:56:25] 2026-01-10 04:55:29,680 | INFO     | [job] control thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:29,836 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:29,842 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,143 | INFO     | [payload] control thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,282 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,391 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,401 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,402 | INFO     | [data] control thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,408 | INFO     | [job] validate thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,410 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,698 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:30,755 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:31,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:56:25] 2026-01-10 04:55:32,022 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:33,073 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:56:25] 2026-01-10 04:55:59,415 | INFO     | PID=896607 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 23:56:25] 2026-01-10 04:55:59,415 | INFO     | .. there are 21 such processes running
[2026-01-09 23:56:25] 2026-01-10 04:55:59,604 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:56:25] 2026-01-10 04:55:59,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:56:25] 2026-01-10 04:55:59,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:56:25] 2026-01-10 04:56:16,423 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:56:25] 2026-01-10 04:56:17,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863394699072)>', '<ExcThread(monitor, started 139863026284288)>']
[2026-01-09 23:56:25] 2026-01-10 04:56:17,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:56:25] 2026-01-10 04:56:17,996 | INFO     | [monitor] control thread has ended
[2026-01-09 23:56:25] 2026-01-10 04:56:22,065 | INFO     | all workflow threads have been joined
[2026-01-09 23:56:25] 2026-01-10 04:56:22,065 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:56:25] 2026-01-10 04:56:22,066 | INFO     | traces error code: 0
[2026-01-09 23:56:25] 2026-01-10 04:56:22,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:56:25] 2026-01-10 04:56:23,809 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:56:25] 2026-01-10 04:56:23,830 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:56:25] 2026-01-10 04:56:23,861 [wrapper] pilotpid: 896607
[2026-01-09 23:56:25] 2026-01-10 04:56:23,933 [wrapper] Pilot exit status: 0
[2026-01-09 23:56:25] 2026-01-10 04:56:24,131 [wrapper] pandaids: 6963153093
[2026-01-09 23:56:25] 2026-01-10 04:56:24,275 [wrapper] cleanup supervisor_pilot 3812576 896608
[2026-01-09 23:56:25] 2026-01-10 04:56:24,286 [wrapper] Test setup, not cleaning
[2026-01-09 23:56:25] 2026-01-10 04:56:24,295 [wrapper] apfmon messages muted
[2026-01-09 23:56:25] 2026-01-10 04:56:24,331 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:56:25] 2026-01-10 04:56:24,383 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:56:25]  *** Error codes and diagnostics ***
[2026-01-09 23:56:25]     "exeErrorCode": 0,
[2026-01-09 23:56:25]     "exeErrorDiag": "",
[2026-01-09 23:56:25]     "pilotErrorCode": 0,
[2026-01-09 23:56:25]     "pilotErrorDiag": "",
[2026-01-09 23:56:25]  *** Listing of results directory ***
[2026-01-09 23:56:25] total 460792
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-09 23:56:25] -rwx------. 1 boincer umatlas     36322 Jan  8 11:07 runpilot2-wrapper.sh
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:09 queuedata.json
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:56:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:02 run_atlas
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:02 job.xml
[2026-01-09 23:56:25] -rw-r--r--. 2 boincer umatlas 224752784 Jan  9 00:02 EVNT.47898824._001152.pool.root.1
[2026-01-09 23:56:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 23:56:25] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:02 shared
[2026-01-09 23:56:25] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:02 input.tar.gz
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:02 boinc_lockfile
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:03 pandaJob.out
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas        57 Jan  9 00:03 setup.sh.local
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 23:56:25] drwx------. 5 boincer umatlas      4096 Jan  9 00:05 pilot3
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas 223040351 Jan  9 23:48 HITS.47898826._029788.pool.root.1
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas       532 Jan  9 23:48 boinc_task_state.xml
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas      6525 Jan  9 23:54 init_data.xml
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas      1047 Jan  9 23:54 memory_monitor_summary.json
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas   1249684 Jan  9 23:54 log.47898826._029788.job.log.tgz.1
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas      7833 Jan  9 23:55 heartbeat.json
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas        95 Jan  9 23:55 pilot_heartbeat.json
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas      4823 Jan  9 23:56 pilotlog.txt
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas   8819160 Jan  9 23:56 log.47898826._029788.job.log.1
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas       357 Jan  9 23:56 output.list
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:56 runtime_log
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas  10086400 Jan  9 23:56 result.tar.gz
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:56 boinc_mmap_file
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 23:56 runtime_log.err
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas       659 Jan  9 23:56 Ru7MDmbi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmY8kKDmGBgVen.diag
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas     21162 Jan  9 23:56 stderr.txt
[2026-01-09 23:56:25] -rw-r--r--. 1 boincer umatlas        29 Jan  9 23:56 wrapper_checkpoint.txt
[2026-01-09 23:56:25] HITS file was successfully produced:
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas 223040351 Jan  9 23:48 shared/HITS.pool.root.1
[2026-01-09 23:56:25]  *** Contents of shared directory: ***
[2026-01-09 23:56:25] total 447756
[2026-01-09 23:56:25] -rw-r--r--. 2 boincer umatlas 224752784 Jan  9 00:02 ATLAS.root_0
[2026-01-09 23:56:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:02 start_atlas.sh
[2026-01-09 23:56:25] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 00:02 input.tar.gz
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas 223040351 Jan  9 23:48 HITS.pool.root.1
[2026-01-09 23:56:25] -rw-------. 1 boincer umatlas  10086400 Jan  9 23:56 result.tar.gz
23:56:27 (881375): run_atlas exited; CPU time 118701.687339
23:56:27 (881375): called boinc_finish(0)

</stderr_txt>
]]>

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