Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:34:56 (3549483): wrapper (7.7.26015): starting
13:34:56 (3549483): wrapper: running run_atlas (--nthreads 2)
[2026-01-09 13:34:56] Arguments: --nthreads 2
[2026-01-09 13:34:56] Threads: 2
[2026-01-09 13:34:56] Checking for CVMFS
[2026-01-09 13:34:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:34:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:34:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:34:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:34:57] 2.9.2.0 3288549 1091 54600 154942 2 57 19772922 36864000 0 130560 0 519141 99.986 38253 2716 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 13:34:57] CVMFS is ok
[2026-01-09 13:34:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 13:34:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 13:34:57] Further information can be found at the LHC@home message board.
[2026-01-09 13:34:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:34:57] Checking for apptainer binary...
[2026-01-09 13:34:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:34:57] Running /usr/bin/apptainer --version
[2026-01-09 13:34:57] apptainer version 1.4.1-1.1
[2026-01-09 13:34:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:34:57] thA369
[2026-01-09 13:34:57] apptainer works
[2026-01-09 13:34:57] Set ATHENA_PROC_NUMBER=2
[2026-01-09 13:34:57] Set ATHENA_CORE_NUMBER=2
[2026-01-09 13:34:57] Starting ATLAS job with PandaID=6963153057
[2026-01-09 13:34:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:42:56]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:42:56] ID_LIKE="rhel fedora"
[2026-01-09 16:42:56] VERSION_ID="7"
[2026-01-09 16:42:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:42:56] ANSI_COLOR="0;31"
[2026-01-09 16:42:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:42:56] HOME_URL="https://www.centos.org/"
[2026-01-09 16:42:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:42:56] 
[2026-01-09 16:42:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:42:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:42:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:42:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:42:56] 
[2026-01-09 16:42:56] 2026-01-09 15:42:25,393 | INFO     | ***************************************
[2026-01-09 16:42:56] 2026-01-09 15:42:25,896 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 16:42:56] 2026-01-09 15:42:25,908 | INFO     | sufficient remaining disk space (341074509824 B)
[2026-01-09 16:42:56] 2026-01-09 15:42:25,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:42:56] 2026-01-09 15:42:25,909 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:42:56] 2026-01-09 15:42:25,909 | INFO     | update_server=False
[2026-01-09 16:42:56] 2026-01-09 15:42:25,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:42:56] 2026-01-09 15:42:25,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:42:56] 2026-01-09 15:42:25,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:42:56] 2026-01-09 15:42:25,909 | INFO     | aborting loop
[2026-01-09 16:42:56] 2026-01-09 15:42:26,761 | INFO     | all data control threads have been joined
[2026-01-09 16:42:56] 2026-01-09 15:42:26,827 | INFO     | all job control threads have been joined
[2026-01-09 16:42:56] 2026-01-09 15:42:26,914 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:26,914 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:26,915 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:26,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:42:56] 2026-01-09 15:42:27,021 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,034 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:42:56] 2026-01-09 15:42:27,268 | INFO     | [job] validate thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,272 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,276 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,395 | INFO     | all payload control threads have been joined
[2026-01-09 16:42:56] 2026-01-09 15:42:27,593 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,665 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:42:56] 2026-01-09 15:42:27,767 | INFO     | [data] control thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,833 | INFO     | [job] control thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:27,934 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:28,400 | INFO     | [payload] control thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:28,992 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:31,207 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:36,341 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:42:56] 2026-01-09 15:42:37,347 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:42:56] 2026-01-09 15:42:37,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388857280320)>', '<ExcThread(monitor, started 140388211861248)>']
[2026-01-09 16:42:56] 2026-01-09 15:42:43,020 | INFO     | all workflow threads have been joined
[2026-01-09 16:42:56] 2026-01-09 15:42:43,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:42:56] 2026-01-09 15:42:43,021 | INFO     | traces error code: 0
[2026-01-09 16:42:56] 2026-01-09 15:42:43,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:42:56] 2026-01-09 15:42:56,563 | INFO     | PID=3553202 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:42:56] 2026-01-09 15:42:56,564 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:42:56] 2026-01-09 15:42:56,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:42:56] 2026-01-09 15:42:56,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:42:56] 2026-01-09 15:42:56,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:42:56] 2026-01-09 15:42:56,564 | INFO     | [monitor] control thread has ended
[2026-01-09 16:42:56] 2026-01-09 15:42:56,606 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:42:56] 2026-01-09 15:42:56,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:42:56] 2026-01-09 15:42:56,610 [wrapper] pilotpid: 3553202
[2026-01-09 16:42:56] 2026-01-09 15:42:56,612 [wrapper] Pilot exit status: 0
[2026-01-09 16:42:56] 2026-01-09 15:42:56,618 [wrapper] pandaids: 6963153057
[2026-01-09 16:42:56] 2026-01-09 15:42:56,635 [wrapper] cleanup supervisor_pilot 3588775 3553203
[2026-01-09 16:42:56] 2026-01-09 15:42:56,637 [wrapper] Test setup, not cleaning
[2026-01-09 16:42:56] 2026-01-09 15:42:56,640 [wrapper] apfmon messages muted
[2026-01-09 16:42:56] 2026-01-09 15:42:56,642 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:42:56] 2026-01-09 15:42:56,644 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:42:56]  *** Error codes and diagnostics ***
[2026-01-09 16:42:56]     "exeErrorCode": 0,
[2026-01-09 16:42:56]     "exeErrorDiag": "",
[2026-01-09 16:42:56]     "pilotErrorCode": 0,
[2026-01-09 16:42:56]     "pilotErrorDiag": "",
[2026-01-09 16:42:56]  *** Listing of results directory ***
[2026-01-09 16:42:56] total 447788
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 16:42:56] -rwx------ 1 boinc boinc     36322 Jan  8 17:07 runpilot2-wrapper.sh
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:09 queuedata.json
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc       100 Jan  9 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:42:56] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 13:34 run_atlas
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc       105 Jan  9 13:34 job.xml
[2026-01-09 16:42:56] -rw-r--r-- 2 boinc boinc 224987916 Jan  9 13:34 EVNT.47898824._001151.pool.root.1
[2026-01-09 16:42:56] drwxrwx--x 2 boinc boinc      4096 Jan  9 13:34 shared
[2026-01-09 16:42:56] -rw-r--r-- 2 boinc boinc    592397 Jan  9 13:34 input.tar.gz
[2026-01-09 16:42:56] -rw-r--r-- 2 boinc boinc     15847 Jan  9 13:34 start_atlas.sh
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc         0 Jan  9 13:34 boinc_setup_complete
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc      6205 Jan  9 13:34 init_data.xml
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc         0 Jan  9 13:34 boinc_lockfile
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc      2519 Jan  9 13:34 pandaJob.out
[2026-01-09 16:42:56] -rw------- 1 boinc boinc    989377 Jan  9 13:35 agis_schedconf.cvmfs.json
[2026-01-09 16:42:56] drwx------ 5 boinc boinc      4096 Jan  9 13:35 pilot3
[2026-01-09 16:42:56] -rw------- 1 boinc boinc 225829206 Jan  9 16:41 HITS.47898826._029752.pool.root.1
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc       530 Jan  9 16:41 boinc_task_state.xml
[2026-01-09 16:42:56] -rw------- 1 boinc boinc      1014 Jan  9 16:42 memory_monitor_summary.json
[2026-01-09 16:42:56] -rw------- 1 boinc boinc   1516240 Jan  9 16:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:42:56] -rw------- 1 boinc boinc    319667 Jan  9 16:42 log.47898826._029752.job.log.tgz.1
[2026-01-09 16:42:56] -rw------- 1 boinc boinc        95 Jan  9 16:42 pilot_heartbeat.json
[2026-01-09 16:42:56] -rw------- 1 boinc boinc      7751 Jan  9 16:42 heartbeat.json
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc      8192 Jan  9 16:42 boinc_mmap_file
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc        28 Jan  9 16:42 wrapper_checkpoint.txt
[2026-01-09 16:42:56] -rw------- 1 boinc boinc       747 Jan  9 16:42 pilotlog.txt
[2026-01-09 16:42:56] -rw------- 1 boinc boinc   1591076 Jan  9 16:42 log.47898826._029752.job.log.1
[2026-01-09 16:42:56] -rw------- 1 boinc boinc       357 Jan  9 16:42 output.list
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc       620 Jan  9 16:42 runtime_log
[2026-01-09 16:42:56] -rw------- 1 boinc boinc   1925120 Jan  9 16:42 result.tar.gz
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc      8898 Jan  9 16:42 runtime_log.err
[2026-01-09 16:42:56] -rw------- 1 boinc boinc       663 Jan  9 16:42 C0RMDmbi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz7kKDm5yixLn.diag
[2026-01-09 16:42:56] -rw-r--r-- 1 boinc boinc      8682 Jan  9 16:42 stderr.txt
[2026-01-09 16:42:56] HITS file was successfully produced:
[2026-01-09 16:42:56] -rw------- 1 boinc boinc 225829206 Jan  9 16:41 shared/HITS.pool.root.1
[2026-01-09 16:42:56]  *** Contents of shared directory: ***
[2026-01-09 16:42:56] total 442740
[2026-01-09 16:42:56] -rw-r--r-- 2 boinc boinc 224987916 Jan  9 13:34 ATLAS.root_0
[2026-01-09 16:42:56] -rw-r--r-- 2 boinc boinc    592397 Jan  9 13:34 input.tar.gz
[2026-01-09 16:42:56] -rw-r--r-- 2 boinc boinc     15847 Jan  9 13:34 start_atlas.sh
[2026-01-09 16:42:56] -rw------- 1 boinc boinc 225829206 Jan  9 16:41 HITS.pool.root.1
[2026-01-09 16:42:56] -rw------- 1 boinc boinc   1925120 Jan  9 16:42 result.tar.gz
16:42:58 (3549483): run_atlas exited; CPU time 22137.757417
16:42:58 (3549483): called boinc_finish(0)

</stderr_txt>
]]>

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