Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:52:34 (2390158): wrapper (7.7.26015): starting
00:52:34 (2390158): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 00:52:34] Arguments: --nthreads 3
[2026-01-09 00:52:34] Threads: 3
[2026-01-09 00:52:34] Checking for CVMFS
[2026-01-09 00:52:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:52:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:52:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:52:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:52:34] 2.9.2.0 2006203 1615 76156 154924 3 57 33657017 36864001 0 130560 0 1002475 99.987 64584 17845 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 00:52:34] CVMFS is ok
[2026-01-09 00:52:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:52:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:52:34] Further information can be found at the LHC@home message board.
[2026-01-09 00:52:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:52:34] Checking for apptainer binary...
[2026-01-09 00:52:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:52:34] Running /usr/bin/apptainer --version
[2026-01-09 00:52:34] apptainer version 1.4.1-1.1
[2026-01-09 00:52:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:52:34] magicA250a
[2026-01-09 00:52:34] apptainer works
[2026-01-09 00:52:34] Set ATHENA_PROC_NUMBER=3
[2026-01-09 00:52:34] Set ATHENA_CORE_NUMBER=3
[2026-01-09 00:52:34] Starting ATLAS job with PandaID=6963152602
[2026-01-09 00:52:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:47:15]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:47:15] 2026-01-09 01:46:45,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:47:15] 2026-01-09 01:46:45,847 | INFO     | aborting loop
[2026-01-09 02:47:15] 2026-01-09 01:46:45,974 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:45,979 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,072 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,180 | INFO     | [job] control thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,331 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,352 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,441 | INFO     | [data] control thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,530 | INFO     | [payload] control thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,853 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,944 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,979 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:46,986 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:47,011 | INFO     | [job] validate thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:47,415 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:48,017 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:47:15] 2026-01-09 01:46:48,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:47:15] 2026-01-09 01:46:52,100 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:55,393 | INFO     | job.realtimelogging is not enabled
[2026-01-09 02:47:15] 2026-01-09 01:46:56,399 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:47:15] 2026-01-09 01:46:56,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730439944000)>', '<ExcThread(monitor, started 139730083624704)>']
[2026-01-09 02:47:15] 2026-01-09 01:47:01,986 | INFO     | all workflow threads have been joined
[2026-01-09 02:47:15] 2026-01-09 01:47:01,986 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:47:15] 2026-01-09 01:47:01,987 | INFO     | traces error code: 0
[2026-01-09 02:47:15] 2026-01-09 01:47:01,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:47:15] 2026-01-09 01:47:15,360 | INFO     | PID=2393877 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 02:47:15] 2026-01-09 01:47:15,361 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:47:15] 2026-01-09 01:47:15,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:47:15] 2026-01-09 01:47:15,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:47:15] 2026-01-09 01:47:15,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:47:15] 2026-01-09 01:47:15,361 | INFO     | [monitor] control thread has ended
[2026-01-09 02:47:15] 2026-01-09 01:47:15,409 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:47:15] 2026-01-09 01:47:15,412 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:47:15] 2026-01-09 01:47:15,414 [wrapper] pilotpid: 2393877
[2026-01-09 02:47:15] 2026-01-09 01:47:15,416 [wrapper] Pilot exit status: 0
[2026-01-09 02:47:15] 2026-01-09 01:47:15,423 [wrapper] pandaids: 6963152602
[2026-01-09 02:47:15] 2026-01-09 01:47:15,439 [wrapper] cleanup supervisor_pilot 2414934 2393878
[2026-01-09 02:47:15] 2026-01-09 01:47:15,441 [wrapper] Test setup, not cleaning
[2026-01-09 02:47:15] 2026-01-09 01:47:15,443 [wrapper] apfmon messages muted
[2026-01-09 02:47:15] 2026-01-09 01:47:15,445 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:47:15] 2026-01-09 01:47:15,448 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:47:15]  *** Error codes and diagnostics ***
[2026-01-09 02:47:15]     "exeErrorCode": 0,
[2026-01-09 02:47:15]     "exeErrorDiag": "",
[2026-01-09 02:47:15]     "pilotErrorCode": 0,
[2026-01-09 02:47:15]     "pilotErrorDiag": "",
[2026-01-09 02:47:15]  *** Listing of results directory ***
[2026-01-09 02:47:15] total 435104
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 02:47:15] -rwx------ 1 boinc boinc     36322 Jan  8 17:06 runpilot2-wrapper.sh
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:09 queuedata.json
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc       100 Jan  9 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:47:15] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 00:52 run_atlas
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc       105 Jan  9 00:52 job.xml
[2026-01-09 02:47:15] -rw-r--r-- 2 boinc boinc 223049276 Jan  9 00:52 EVNT.47898824._000875.pool.root.1
[2026-01-09 02:47:15] -rw-r--r-- 2 boinc boinc    592401 Jan  9 00:52 input.tar.gz
[2026-01-09 02:47:15] -rw-r--r-- 2 boinc boinc     15847 Jan  9 00:52 start_atlas.sh
[2026-01-09 02:47:15] drwxrwx--x 2 boinc boinc      4096 Jan  9 00:52 shared
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc         0 Jan  9 00:52 boinc_setup_complete
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc      6442 Jan  9 00:52 init_data.xml
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc         0 Jan  9 00:52 boinc_lockfile
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc      2518 Jan  9 00:52 pandaJob.out
[2026-01-09 02:47:15] -rw------- 1 boinc boinc    989837 Jan  9 00:52 agis_schedconf.cvmfs.json
[2026-01-09 02:47:15] -rw------- 1 boinc boinc   1516240 Jan  9 00:52 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:47:15] drwx------ 5 boinc boinc      4096 Jan  9 00:52 pilot3
[2026-01-09 02:47:15] -rw------- 1 boinc boinc 216064157 Jan  9 02:46 HITS.47898826._029360.pool.root.1
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc       530 Jan  9 02:46 boinc_task_state.xml
[2026-01-09 02:47:15] -rw------- 1 boinc boinc      1022 Jan  9 02:46 memory_monitor_summary.json
[2026-01-09 02:47:15] -rw------- 1 boinc boinc    279310 Jan  9 02:46 log.47898826._029360.job.log.tgz.1
[2026-01-09 02:47:15] -rw------- 1 boinc boinc      7764 Jan  9 02:46 heartbeat.json
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc        27 Jan  9 02:47 wrapper_checkpoint.txt
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc      8192 Jan  9 02:47 boinc_mmap_file
[2026-01-09 02:47:15] -rw------- 1 boinc boinc       747 Jan  9 02:47 pilotlog.txt
[2026-01-09 02:47:15] -rw------- 1 boinc boinc        95 Jan  9 02:47 pilot_heartbeat.json
[2026-01-09 02:47:15] -rw------- 1 boinc boinc    986789 Jan  9 02:47 log.47898826._029360.job.log.1
[2026-01-09 02:47:15] -rw------- 1 boinc boinc       357 Jan  9 02:47 output.list
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc       620 Jan  9 02:47 runtime_log
[2026-01-09 02:47:15] -rw------- 1 boinc boinc   1290240 Jan  9 02:47 result.tar.gz
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc      8917 Jan  9 02:47 runtime_log.err
[2026-01-09 02:47:15] -rw------- 1 boinc boinc       663 Jan  9 02:47 ZLrNDmCi7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH5kKDm1MRzAo.diag
[2026-01-09 02:47:15] -rw-r--r-- 1 boinc boinc      6730 Jan  9 02:47 stderr.txt
[2026-01-09 02:47:15] HITS file was successfully produced:
[2026-01-09 02:47:15] -rw------- 1 boinc boinc 216064157 Jan  9 02:46 shared/HITS.pool.root.1
[2026-01-09 02:47:15]  *** Contents of shared directory: ***
[2026-01-09 02:47:15] total 430692
[2026-01-09 02:47:15] -rw-r--r-- 2 boinc boinc 223049276 Jan  9 00:52 ATLAS.root_0
[2026-01-09 02:47:15] -rw-r--r-- 2 boinc boinc    592401 Jan  9 00:52 input.tar.gz
[2026-01-09 02:47:15] -rw-r--r-- 2 boinc boinc     15847 Jan  9 00:52 start_atlas.sh
[2026-01-09 02:47:15] -rw------- 1 boinc boinc 216064157 Jan  9 02:46 HITS.pool.root.1
[2026-01-09 02:47:15] -rw------- 1 boinc boinc   1290240 Jan  9 02:47 result.tar.gz
02:47:17 (2390158): run_atlas exited; CPU time 19883.370284
02:47:17 (2390158): called boinc_finish(0)

</stderr_txt>
]]>

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