Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:32:22 (75836): wrapper (7.7.26015): starting
14:32:22 (75836): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 14:32:22] Arguments: --nthreads 12
[2026-01-08 14:32:22] Threads: 12
[2026-01-08 14:32:22] Checking for CVMFS
[2026-01-08 14:32:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 14:32:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 14:32:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 14:32:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 14:32:24] 2.11.5.0 1559483 55730 151100 154922 1 439 39103714 45568001 21705 130560 0 386049295 99.751 279985482 23062 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-08 14:32:24] CVMFS is ok
[2026-01-08 14:32:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:32:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:32:24] Further information can be found at the LHC@home message board.
[2026-01-08 14:32:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:32:24] Checking for apptainer binary...
[2026-01-08 14:32:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 14:32:24] Running /usr/bin/apptainer --version
[2026-01-08 14:32:25] apptainer version 1.4.1-1.el9
[2026-01-08 14:32:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:32:26] wns0054.triumf.lcg
[2026-01-08 14:32:26] apptainer works
[2026-01-08 14:32:26] Set ATHENA_PROC_NUMBER=12
[2026-01-08 14:32:26] Set ATHENA_CORE_NUMBER=12
[2026-01-08 14:32:26] Starting ATLAS job with PandaID=6963152688
[2026-01-08 14:32:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:38:20]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:38:20] 2026-01-08 22:37:50,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | WARNING  | wrong length of table data, x=[1767911689.0], y=[2112.0] (must be same and length>=4)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | could have reported an average CPU frequency of 2769 MHz (4 samples)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | ..............................
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . Timing measurements:
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . get job = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . initial setup = 5 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . payload setup = 28 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . stage-in = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . payload execution = 55 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . stage-out = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | . log creation = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | ..............................
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963152688/pilotlog.txt
[2026-01-08 14:38:20] 2026-01-08 22:37:50,590 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 14:38:20] - Log from pilotlog.txt -
[2026-01-08 14:38:20] 2026-01-08 22:37:50,536 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963152688/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,536 | INFO     | extracted standard info from prmon json
[2026-01-08 14:38:20] 2026-01-08 22:37:50,537 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:38:20] 2026-01-08 22:37:50,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:38:20] 2026-01-08 22:37:50,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:38:20] 2026-01-08 22:37:50,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | WARNING  | wrong length of table data, x=[1767911689.0], y=[2112.0] (must be same and length>=4)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | could have reported an average CPU frequency of 2769 MHz (4 samples)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | ..............................
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . Timing measurements:
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . get job = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . initial setup = 5 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . payload setup = 28 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . stage-in = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . payload execution = 55 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . stage-out = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | . log creation = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | ..............................
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963152688/pilotlog.txt
[2026-01-08 14:38:20] 2026-01-08 22:37:50,591 | WARNING  | 
[2026-01-08 14:38:20] [begin log extracts]
[2026-01-08 14:38:20] - Log from pilotlog.txt -
[2026-01-08 14:38:20] 2026-01-08 22:37:50,536 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963152688/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,536 | INFO     | extracted standard info from prmon json
[2026-01-08 14:38:20] 2026-01-08 22:37:50,537 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:38:20] 2026-01-08 22:37:50,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:38:20] 2026-01-08 22:37:50,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:38:20] 2026-01-08 22:37:50,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | WARNING  | wrong length of table data, x=[1767911689.0], y=[2112.0] (must be same and length>=4)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | could have reported an average CPU frequency of 2769 MHz (4 samples)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | ..............................
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . Timing measurements:
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . get job = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . initial setup = 5 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . payload setup = 28 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . stage-in = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . payload execution = 55 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,557 | INFO     | . stage-out = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | . log creation = 0 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | ..............................
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 14:38:20] 2026-01-08 22:37:50,558 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963152688/pilotlog.txt
[2026-01-08 14:38:20] [end log extracts]
[2026-01-08 14:38:20] 2026-01-08 22:37:50,591 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,592 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 14:38:20] 2026-01-08 22:37:50,981 | INFO     | time since job start (275s) is within the limit (349056.0s)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | 
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | job summary report
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | --------------------------------------------------
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | PanDA job id: 6963152688
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | task id: 47898826
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 14:35:18,248 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | pilot state: failed 
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | transexitcode: 65
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | exeerrorcode: 65
[2026-01-08 14:38:20] 2026-01-08 22:37:50,985 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | exitcode: 65
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | cpuconsumptiontime: 17 s
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | nevents: 0
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | neventsw: 0
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | pid: 86595
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | pgrp: 86595
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | corecount: 12
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | event service: False
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | sizes: {0: 2283140, 1: 2283822, 2: 2284021, 13: 2284021, 20: 2284339, 24: 2284367, 88: 2307925, 89: 2312245, 232: 2312383}
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | --------------------------------------------------
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | 
[2026-01-08 14:38:20] 2026-01-08 22:37:50,986 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 14:38:20] 2026-01-08 22:37:51,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:38:20] 2026-01-08 22:37:51,054 | INFO     | job 6963152688 has completed (purged errors)
[2026-01-08 14:38:20] 2026-01-08 22:37:51,055 | INFO     | overall cleanup function is called
[2026-01-08 14:38:20] 2026-01-08 22:37:52,063 | INFO     | --- collectZombieJob: --- 10, [86595]
[2026-01-08 14:38:20] 2026-01-08 22:37:52,063 | INFO     | zombie collector waiting for pid 86595
[2026-01-08 14:38:20] 2026-01-08 22:37:52,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:38:20] 2026-01-08 22:37:52,063 | INFO     | collected zombie processes
[2026-01-08 14:38:20] 2026-01-08 22:37:52,063 | INFO     | will attempt to kill all subprocesses of pid=86595
[2026-01-08 14:38:20] 2026-01-08 22:37:53,131 | INFO     | PID=79753 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 14:38:20] 2026-01-08 22:37:53,131 | INFO     | .. there are 42 such processes running
[2026-01-08 14:38:20] 2026-01-08 22:37:53,145 | INFO     | process IDs to be killed: [86595] (in reverse order)
[2026-01-08 14:38:20] 2026-01-08 22:37:53,409 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:38:20] 2026-01-08 22:37:53,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:38:20] 2026-01-08 22:37:53,423 | INFO     | did not find any defunct processes belonging to 86595
[2026-01-08 14:38:20] 2026-01-08 22:37:53,432 | INFO     | did not find any defunct processes belonging to 86595
[2026-01-08 14:38:20] 2026-01-08 22:37:53,432 | INFO     | ready for new job
[2026-01-08 14:38:20] 2026-01-08 22:37:53,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:38:20] 2026-01-08 22:37:53,434 | INFO     | ***************************************
[2026-01-08 14:38:20] 2026-01-08 22:37:53,434 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:38:20] 2026-01-08 22:37:53,434 | INFO     | ***************************************
[2026-01-08 14:38:20] 2026-01-08 22:37:53,434 | INFO     | 
[2026-01-08 14:38:20] 2026-01-08 22:37:53,436 | INFO     | architecture information:
[2026-01-08 14:38:20] 2026-01-08 22:37:53,436 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:38:20] 2026-01-08 22:37:53,480 | INFO     | cat /etc/os-release:
[2026-01-08 14:38:20] NAME="CentOS Linux"
[2026-01-08 14:38:20] VERSION="7 (Core)"
[2026-01-08 14:38:20] ID="centos"
[2026-01-08 14:38:20] ID_LIKE="rhel fedora"
[2026-01-08 14:38:20] VERSION_ID="7"
[2026-01-08 14:38:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:38:20] ANSI_COLOR="0;31"
[2026-01-08 14:38:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:38:20] HOME_URL="https://www.centos.org/"
[2026-01-08 14:38:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:38:20] 
[2026-01-08 14:38:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:38:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:38:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:38:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:38:20] 
[2026-01-08 14:38:20] 2026-01-08 22:37:53,480 | INFO     | ***************************************
[2026-01-08 14:38:20] 2026-01-08 22:37:53,984 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 14:38:20] 2026-01-08 22:37:54,041 | INFO     | sufficient remaining disk space (1767630700544 B)
[2026-01-08 14:38:20] 2026-01-08 22:37:54,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:38:20] 2026-01-08 22:37:54,042 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:38:20] 2026-01-08 22:37:54,042 | INFO     | update_server=False
[2026-01-08 14:38:20] 2026-01-08 22:37:54,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:38:20] 2026-01-08 22:37:54,043 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-08 14:38:20] 2026-01-08 22:37:54,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:38:20] 2026-01-08 22:37:54,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:38:20] 2026-01-08 22:37:54,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:38:20] 2026-01-08 22:37:54,072 | INFO     | all job control threads have been joined
[2026-01-08 14:38:20] 2026-01-08 22:37:54,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:38:20] 2026-01-08 22:37:54,173 | INFO     | all payload control threads have been joined
[2026-01-08 14:38:20] 2026-01-08 22:37:54,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:38:20] 2026-01-08 22:37:54,789 | INFO     | all data control threads have been joined
[2026-01-08 14:38:20] 2026-01-08 22:37:54,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:38:20] 2026-01-08 22:37:54,796 | INFO     | aborting loop
[2026-01-08 14:38:20] 2026-01-08 22:37:55,048 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,078 | INFO     | [job] control thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,179 | INFO     | [payload] control thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,266 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,322 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,538 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,684 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,795 | INFO     | [data] control thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,800 | INFO     | [job] validate thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:55,802 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:56,001 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:56,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:38:20] 2026-01-08 22:37:56,143 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:56,328 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:56,554 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:57,018 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:37:58,241 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:38:20] 2026-01-08 22:38:14,788 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:38:20] 2026-01-08 22:38:14,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140130476353344)>', '<ExcThread(monitor, started 140129767233280)>']
[2026-01-08 14:38:20] 2026-01-08 22:38:15,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:38:20] 2026-01-08 22:38:15,184 | INFO     | [monitor] control thread has ended
[2026-01-08 14:38:20] 2026-01-08 22:38:19,905 | INFO     | all workflow threads have been joined
[2026-01-08 14:38:20] 2026-01-08 22:38:19,905 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:38:20] 2026-01-08 22:38:19,905 | INFO     | traces error code: 0
[2026-01-08 14:38:20] 2026-01-08 22:38:19,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:38:20] 2026-01-08 22:38:20,139 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:38:20] 2026-01-08 22:38:20,151 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:38:20] 2026-01-08 22:38:20,154 [wrapper] pilotpid: 79753
[2026-01-08 14:38:20] 2026-01-08 22:38:20,162 [wrapper] Pilot exit status: 0
[2026-01-08 14:38:20] 2026-01-08 22:38:20,209 [wrapper] pandaids: 6963152688
[2026-01-08 14:38:20] 2026-01-08 22:38:20,324 [wrapper] cleanup supervisor_pilot   79759 79754
[2026-01-08 14:38:20] 2026-01-08 22:38:20,351 [wrapper] Test setup, not cleaning
[2026-01-08 14:38:20] 2026-01-08 22:38:20,366 [wrapper] apfmon messages muted
[2026-01-08 14:38:20] 2026-01-08 22:38:20,408 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:38:20] 2026-01-08 22:38:20,419 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:38:20]  *** Error codes and diagnostics ***
[2026-01-08 14:38:20]     "exeErrorCode": 65,
[2026-01-08 14:38:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 14:38:20]     "pilotErrorCode": 1305,
[2026-01-08 14:38:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 14:38:20]  *** Listing of results directory ***
[2026-01-08 14:38:20] total 223056
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:02 pilot3.tar.gz
[2026-01-08 14:38:20] -rwx------. 1 boinc boinc     36322 Jan  8 08:06 runpilot2-wrapper.sh
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc      5112 Jan  8 08:09 queuedata.json
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc       100 Jan  8 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:38:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 14:32 run_atlas
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc       105 Jan  8 14:32 job.xml
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc      6595 Jan  8 14:32 init_data.xml
[2026-01-08 14:38:20] -rw-r--r--. 2 boinc boinc 224282545 Jan  8 14:32 EVNT.47898824._000878.pool.root.1
[2026-01-08 14:38:20] -rw-r--r--. 2 boinc boinc     15847 Jan  8 14:32 start_atlas.sh
[2026-01-08 14:38:20] drwxrwx--x. 2 boinc boinc      4096 Jan  8 14:32 shared
[2026-01-08 14:38:20] -rw-r--r--. 2 boinc boinc    592397 Jan  8 14:32 input.tar.gz
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc         0 Jan  8 14:32 boinc_lockfile
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc      2518 Jan  8 14:32 pandaJob.out
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc    989837 Jan  8 14:33 agis_schedconf.cvmfs.json
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc   1516240 Jan  8 14:33 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:38:20] drwx------. 5 boinc boinc      4096 Jan  8 14:33 pilot3
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc       523 Jan  8 14:35 boinc_task_state.xml
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc       961 Jan  8 14:35 memory_monitor_summary.json
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc     21979 Jan  8 14:35 log.47898826._029446.job.log.tgz.1
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc        95 Jan  8 14:37 pilot_heartbeat.json
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc      8409 Jan  8 14:37 heartbeat.json
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc      8192 Jan  8 14:38 boinc_mmap_file
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc        22 Jan  8 14:38 wrapper_checkpoint.txt
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc      4551 Jan  8 14:38 pilotlog.txt
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc     95336 Jan  8 14:38 log.47898826._029446.job.log.1
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc       188 Jan  8 14:38 output.list
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc       620 Jan  8 14:38 runtime_log
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc    133120 Jan  8 14:38 result.tar.gz
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc      8636 Jan  8 14:38 runtime_log.err
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc       645 Jan  8 14:38 PnvKDmNi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXsfKDmHV13Pm.diag
[2026-01-08 14:38:20] -rw-r--r--. 1 boinc boinc      2139 Jan  8 14:38 stderr.txt
[2026-01-08 14:38:20] No HITS result produced
[2026-01-08 14:38:20]  *** Contents of shared directory: ***
[2026-01-08 14:38:20] total 219760
[2026-01-08 14:38:20] -rw-r--r--. 2 boinc boinc 224282545 Jan  8 14:32 ATLAS.root_0
[2026-01-08 14:38:20] -rw-r--r--. 2 boinc boinc     15847 Jan  8 14:32 start_atlas.sh
[2026-01-08 14:38:20] -rw-r--r--. 2 boinc boinc    592397 Jan  8 14:32 input.tar.gz
[2026-01-08 14:38:20] -rw-------. 1 boinc boinc    133120 Jan  8 14:38 result.tar.gz
14:38:22 (75836): run_atlas exited; CPU time 29.745022
14:38:22 (75836): called boinc_finish(0)

</stderr_txt>
]]>

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