Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:08:50 (1979354): wrapper (7.7.26015): starting
14:08:50 (1979354): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 14:08:50] Arguments: --nthreads 8
[2026-01-08 14:08:50] Threads: 8
[2026-01-08 14:08:50] Checking for CVMFS
[2026-01-08 14:08:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 14:08:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 14:08:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 14:08:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 14:08:52] 2.11.3.0 278442 55797 189632 154920 0 369 41670442 45568000 14019 130560 0 247220001 99.751 177153194 21278 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 14:08:52] CVMFS is ok
[2026-01-08 14:08:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:08:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:08:52] Further information can be found at the LHC@home message board.
[2026-01-08 14:08:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:08:52] Checking for apptainer binary...
[2026-01-08 14:08:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 14:08:52] Running /usr/bin/apptainer --version
[2026-01-08 14:08:52] apptainer version 1.4.1-1.el9
[2026-01-08 14:08:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:08:52] wns0021.triumf.lcg
[2026-01-08 14:08:52] apptainer works
[2026-01-08 14:08:52] Set ATHENA_PROC_NUMBER=8
[2026-01-08 14:08:52] Set ATHENA_CORE_NUMBER=8
[2026-01-08 14:08:53] Starting ATLAS job with PandaID=6963152338
[2026-01-08 14:08:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:15:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | WARNING  | wrong length of table data, x=[1767910253.0, 1767910314.0], y=[24401.0, 468389.0] (must be same and length>=4)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | ..............................
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | . Timing measurements:
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | . get job = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . initial setup = 4 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . payload setup = 17 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . stage-in = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . payload execution = 96 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . stage-out = 2 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . log creation = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | ..............................
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963152338/pilotlog.txt
[2026-01-08 14:15:29] 2026-01-08 22:14:23,272 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 14:15:29] - Log from pilotlog.txt -
[2026-01-08 14:15:29] 2026-01-08 22:14:23,129 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963152338/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | INFO     | extracted standard info from prmon json
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | WARNING  | wrong length of table data, x=[1767910253.0, 1767910314.0], y=[24401.0, 468389.0] (must be same and length>=4)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | ..............................
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | . Timing measurements:
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | . get job = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . initial setup = 4 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . payload setup = 17 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . stage-in = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . payload execution = 96 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . stage-out = 2 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . log creation = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | ..............................
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963152338/pilotlog.txt
[2026-01-08 14:15:29] 2026-01-08 22:14:23,272 | WARNING  | 
[2026-01-08 14:15:29] [begin log extracts]
[2026-01-08 14:15:29] - Log from pilotlog.txt -
[2026-01-08 14:15:29] 2026-01-08 22:14:23,129 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963152338/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | INFO     | extracted standard info from prmon json
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:15:29] 2026-01-08 22:14:23,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | WARNING  | wrong length of table data, x=[1767910253.0, 1767910314.0], y=[24401.0, 468389.0] (must be same and length>=4)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | ..............................
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | . Timing measurements:
[2026-01-08 14:15:29] 2026-01-08 22:14:23,131 | INFO     | . get job = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . initial setup = 4 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . payload setup = 17 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . stage-in = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . payload execution = 96 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . stage-out = 2 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | . log creation = 0 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | ..............................
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 14:15:29] 2026-01-08 22:14:23,132 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963152338/pilotlog.txt
[2026-01-08 14:15:29] [end log extracts]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,273 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,273 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 14:15:29] 2026-01-08 22:14:23,538 | INFO     | 
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | job summary report
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | --------------------------------------------------
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | PanDA job id: 6963152338
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | task id: 47898826
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 14:11:53,572 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | pilot state: failed 
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | transexitcode: 65
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | exeerrorcode: 65
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,539 | INFO     | exitcode: 65
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | cpuconsumptiontime: 19 s
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | nevents: 0
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | neventsw: 0
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | pid: 1989967
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | pgrp: 1989967
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | corecount: 8
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | event service: False
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | sizes: {0: 2283740, 1: 2283995, 12: 2283995, 18: 2284285, 23: 2284313, 118: 2307714, 122: 2312006, 125: 2312034, 256: 2312200}
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | --------------------------------------------------
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | 
[2026-01-08 14:15:29] 2026-01-08 22:14:23,540 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 14:15:29] 2026-01-08 22:14:23,641 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | job 6963152338 has completed (purged errors)
[2026-01-08 14:15:29] 2026-01-08 22:14:23,643 | INFO     | overall cleanup function is called
[2026-01-08 14:15:29] 2026-01-08 22:14:24,668 | INFO     | --- collectZombieJob: --- 10, [1989967]
[2026-01-08 14:15:29] 2026-01-08 22:14:24,668 | INFO     | zombie collector waiting for pid 1989967
[2026-01-08 14:15:29] 2026-01-08 22:14:24,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:15:29] 2026-01-08 22:14:24,668 | INFO     | collected zombie processes
[2026-01-08 14:15:29] 2026-01-08 22:14:24,668 | INFO     | will attempt to kill all subprocesses of pid=1989967
[2026-01-08 14:15:29] 2026-01-08 22:14:25,388 | INFO     | process IDs to be killed: [1989967] (in reverse order)
[2026-01-08 14:15:29] 2026-01-08 22:14:26,004 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:15:29] 2026-01-08 22:14:26,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:15:29] 2026-01-08 22:14:26,043 | INFO     | did not find any defunct processes belonging to 1989967
[2026-01-08 14:15:29] 2026-01-08 22:14:26,065 | INFO     | did not find any defunct processes belonging to 1989967
[2026-01-08 14:15:29] 2026-01-08 22:14:26,066 | INFO     | ready for new job
[2026-01-08 14:15:29] 2026-01-08 22:14:26,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:15:29] 2026-01-08 22:14:26,074 | INFO     | ***************************************
[2026-01-08 14:15:29] 2026-01-08 22:14:26,075 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:15:29] 2026-01-08 22:14:26,075 | INFO     | ***************************************
[2026-01-08 14:15:29] 2026-01-08 22:14:26,075 | INFO     | 
[2026-01-08 14:15:29] 2026-01-08 22:14:26,076 | INFO     | architecture information:
[2026-01-08 14:15:29] 2026-01-08 22:14:26,077 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:15:29] 2026-01-08 22:14:26,170 | INFO     | cat /etc/os-release:
[2026-01-08 14:15:29] NAME="CentOS Linux"
[2026-01-08 14:15:29] VERSION="7 (Core)"
[2026-01-08 14:15:29] ID="centos"
[2026-01-08 14:15:29] ID_LIKE="rhel fedora"
[2026-01-08 14:15:29] VERSION_ID="7"
[2026-01-08 14:15:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:15:29] ANSI_COLOR="0;31"
[2026-01-08 14:15:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:15:29] HOME_URL="https://www.centos.org/"
[2026-01-08 14:15:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:15:29] 
[2026-01-08 14:15:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:15:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:15:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:15:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:15:29] 
[2026-01-08 14:15:29] 2026-01-08 22:14:26,170 | INFO     | ***************************************
[2026-01-08 14:15:29] 2026-01-08 22:14:26,674 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 14:15:29] 2026-01-08 22:14:26,776 | INFO     | sufficient remaining disk space (916651507712 B)
[2026-01-08 14:15:29] 2026-01-08 22:14:26,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:15:29] 2026-01-08 22:14:26,777 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:15:29] 2026-01-08 22:14:26,777 | INFO     | update_server=False
[2026-01-08 14:15:29] 2026-01-08 22:14:26,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:15:29] 2026-01-08 22:14:26,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:15:29] 2026-01-08 22:14:26,935 | INFO     | aborting loop
[2026-01-08 14:15:29] 2026-01-08 22:14:27,183 | INFO     | all data control threads have been joined
[2026-01-08 14:15:29] 2026-01-08 22:14:27,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:15:29] 2026-01-08 22:14:27,783 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:27,941 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:27,945 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:27,986 | INFO     | all job control threads have been joined
[2026-01-08 14:15:29] 2026-01-08 22:14:28,157 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,189 | INFO     | [data] control thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,190 | INFO     | all payload control threads have been joined
[2026-01-08 14:15:29] 2026-01-08 22:14:28,257 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,258 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,320 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,414 | INFO     | [job] validate thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:15:29] 2026-01-08 22:14:28,807 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,854 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:28,992 | INFO     | [job] control thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:29,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:15:29] 2026-01-08 22:14:29,196 | INFO     | [payload] control thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:29,254 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:29,560 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:33,168 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:15:29] 2026-01-08 22:14:55,712 | INFO     | PID=1983074 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 14:15:29] 2026-01-08 22:14:55,712 | INFO     | .. there are 33 such processes running
[2026-01-08 14:15:29] 2026-01-08 22:14:55,713 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:15:29] 2026-01-08 22:14:55,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:15:29] 2026-01-08 22:14:55,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:15:29] 2026-01-08 22:15:22,438 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:15:29] 2026-01-08 22:15:24,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414313580352)>', '<ExcThread(monitor, started 140413461579520)>']
[2026-01-08 14:15:29] 2026-01-08 22:15:24,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:15:29] 2026-01-08 22:15:24,894 | INFO     | [monitor] control thread has ended
[2026-01-08 14:15:29] 2026-01-08 22:15:29,223 | INFO     | all workflow threads have been joined
[2026-01-08 14:15:29] 2026-01-08 22:15:29,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:15:29] 2026-01-08 22:15:29,223 | INFO     | traces error code: 0
[2026-01-08 14:15:29] 2026-01-08 22:15:29,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:15:29] 2026-01-08 22:15:29,497 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:15:29] 2026-01-08 22:15:29,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:15:29] 2026-01-08 22:15:29,512 [wrapper] pilotpid: 1983074
[2026-01-08 14:15:29] 2026-01-08 22:15:29,523 [wrapper] Pilot exit status: 0
[2026-01-08 14:15:29] 2026-01-08 22:15:29,563 [wrapper] pandaids: 6963152338
[2026-01-08 14:15:29] 2026-01-08 22:15:29,620 [wrapper] cleanup supervisor_pilot 1983084 1983075
[2026-01-08 14:15:29] 2026-01-08 22:15:29,645 [wrapper] Test setup, not cleaning
[2026-01-08 14:15:29] 2026-01-08 22:15:29,667 [wrapper] apfmon messages muted
[2026-01-08 14:15:29] 2026-01-08 22:15:29,669 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:15:29] 2026-01-08 22:15:29,671 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:15:29]  *** Error codes and diagnostics ***
[2026-01-08 14:15:29]     "exeErrorCode": 65,
[2026-01-08 14:15:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 14:15:29]     "pilotErrorCode": 1305,
[2026-01-08 14:15:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 14:15:29]  *** Listing of results directory ***
[2026-01-08 14:15:29] total 225264
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:02 pilot3.tar.gz
[2026-01-08 14:15:29] -rwx------. 1 boinc boinc     36322 Jan  8 08:06 runpilot2-wrapper.sh
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc      5112 Jan  8 08:09 queuedata.json
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc       100 Jan  8 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:15:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 14:08 run_atlas
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc       105 Jan  8 14:08 job.xml
[2026-01-08 14:15:29] -rw-r--r--. 2 boinc boinc 226520843 Jan  8 14:08 EVNT.47898824._001141.pool.root.1
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc      6444 Jan  8 14:08 init_data.xml
[2026-01-08 14:15:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 14:08 start_atlas.sh
[2026-01-08 14:15:29] drwxrwx--x. 2 boinc boinc      4096 Jan  8 14:08 shared
[2026-01-08 14:15:29] -rw-r--r--. 2 boinc boinc    592395 Jan  8 14:08 input.tar.gz
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc         0 Jan  8 14:08 boinc_lockfile
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc      2519 Jan  8 14:08 pandaJob.out
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc    989845 Jan  8 14:09 agis_schedconf.cvmfs.json
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc   1516240 Jan  8 14:09 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:15:29] drwx------. 5 boinc boinc      4096 Jan  8 14:09 pilot3
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc       524 Jan  8 14:11 boinc_task_state.xml
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc       989 Jan  8 14:12 memory_monitor_summary.json
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc     22375 Jan  8 14:12 log.47898826._029139.job.log.tgz.1
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc      8425 Jan  8 14:14 heartbeat.json
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc        95 Jan  8 14:14 pilot_heartbeat.json
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc      8192 Jan  8 14:15 boinc_mmap_file
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc        23 Jan  8 14:15 wrapper_checkpoint.txt
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc      4822 Jan  8 14:15 pilotlog.txt
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc     96287 Jan  8 14:15 log.47898826._029139.job.log.1
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc       188 Jan  8 14:15 output.list
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc       620 Jan  8 14:15 runtime_log
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc    143360 Jan  8 14:15 result.tar.gz
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc      8634 Jan  8 14:15 runtime_log.err
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc       645 Jan  8 14:15 DAONDmAi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNrfKDmqusTjm.diag
[2026-01-08 14:15:29] -rw-r--r--. 1 boinc boinc     21877 Jan  8 14:15 stderr.txt
[2026-01-08 14:15:29] No HITS result produced
[2026-01-08 14:15:29]  *** Contents of shared directory: ***
[2026-01-08 14:15:29] total 221948
[2026-01-08 14:15:29] -rw-r--r--. 2 boinc boinc 226520843 Jan  8 14:08 ATLAS.root_0
[2026-01-08 14:15:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 14:08 start_atlas.sh
[2026-01-08 14:15:29] -rw-r--r--. 2 boinc boinc    592395 Jan  8 14:08 input.tar.gz
[2026-01-08 14:15:29] -rw-------. 1 boinc boinc    143360 Jan  8 14:15 result.tar.gz
14:15:31 (1979354): run_atlas exited; CPU time 30.966315
14:15:31 (1979354): called boinc_finish(0)

</stderr_txt>
]]>

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