Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:22:04 (10239): wrapper (7.7.26015): starting
06:22:04 (10239): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 06:22:04] Arguments: --nthreads 8
[2026-01-09 06:22:04] Threads: 8
[2026-01-09 06:22:04] Checking for CVMFS
[2026-01-09 06:22:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:22:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:22:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:22:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:22:05] 2.11.2.0 12106 34971 98516 154933 0 56 16487950 25165824 0 130560 0 15171373 99.818 8706104 2908 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 06:22:05] CVMFS is ok
[2026-01-09 06:22:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:22:05] Checking for apptainer binary...
[2026-01-09 06:22:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:22:05] Running /usr/bin/apptainer --version
[2026-01-09 06:22:05] apptainer version 1.3.2-1.el7
[2026-01-09 06:22:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:22:07] cg-vwn435.simple-grid.lan
[2026-01-09 06:22:07] apptainer works
[2026-01-09 06:22:07] Set ATHENA_PROC_NUMBER=8
[2026-01-09 06:22:07] Set ATHENA_CORE_NUMBER=8
[2026-01-09 06:22:07] Starting ATLAS job with PandaID=6962920165
[2026-01-09 06:22:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:03:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:03:46] 2026-01-09 08:02:52,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:03:46] 2026-01-09 08:02:52,843 | INFO     | PID=14005 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:03:46] 2026-01-09 08:02:53,429 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:03:46] 2026-01-09 08:02:53,430 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 09:03:46] 2026-01-09 08:02:53,432 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6962920165/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,433 | INFO     | extracted standard info from prmon json
[2026-01-09 09:03:46] 2026-01-09 08:02:53,433 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:03:46] 2026-01-09 08:02:53,433 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:03:46] 2026-01-09 08:02:53,433 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:03:46] 2026-01-09 08:02:53,433 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:03:46] 2026-01-09 08:02:53,437 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:03:46] 2026-01-09 08:02:53,438 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 09:03:46] 2026-01-09 08:02:53,439 | INFO     | sum of deviations: -20353256980.5
[2026-01-09 09:03:46] 2026-01-09 08:02:53,439 | INFO     | mean x: 1767940970.5
[2026-01-09 09:03:46] 2026-01-09 08:02:53,439 | INFO     | mean y: 2526679.905063291
[2026-01-09 09:03:46] 2026-01-09 08:02:53,439 | INFO     | intersect: 29424336825.064014
[2026-01-09 09:03:46] 2026-01-09 08:02:53,440 | INFO     | chi2: 2.4914183779137375
[2026-01-09 09:03:46] 2026-01-09 08:02:53,440 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,441 | INFO     | sum of deviations: -8887950405.000002
[2026-01-09 09:03:46] 2026-01-09 08:02:53,442 | INFO     | mean x: 1767940818.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,442 | INFO     | mean y: 2541864.9411764704
[2026-01-09 09:03:46] 2026-01-09 08:02:53,442 | INFO     | intersect: 14151849262.679514
[2026-01-09 09:03:46] 2026-01-09 08:02:53,442 | INFO     | chi2: 1.7333139274340639
[2026-01-09 09:03:46] 2026-01-09 08:02:53,443 | INFO     | current chi2=1.7333139274340639 (change=30.42862881642925 %)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,443 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,444 | INFO     | sum of deviations: -7994542758.000002
[2026-01-09 09:03:46] 2026-01-09 08:02:53,444 | INFO     | mean x: 1767940665.5
[2026-01-09 09:03:46] 2026-01-09 08:02:53,444 | INFO     | mean y: 2543158.472972973
[2026-01-09 09:03:46] 2026-01-09 08:02:53,445 | INFO     | intersect: 14063587329.22804
[2026-01-09 09:03:46] 2026-01-09 08:02:53,445 | INFO     | chi2: 1.733490928389593
[2026-01-09 09:03:46] 2026-01-09 08:02:53,445 | INFO     | current chi2=1.733490928389593 (change=-0.010211707915548162 %)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,445 | INFO     | right removable region: 147
[2026-01-09 09:03:46] 2026-01-09 08:02:53,445 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,447 | INFO     | sum of deviations: -45095243201.99999
[2026-01-09 09:03:46] 2026-01-09 08:02:53,447 | INFO     | mean x: 1767941123.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,447 | INFO     | mean y: 2559759.267973856
[2026-01-09 09:03:46] 2026-01-09 08:02:53,447 | INFO     | intersect: 71792628250.11871
[2026-01-09 09:03:46] 2026-01-09 08:02:53,447 | INFO     | chi2: 0.9695004789137083
[2026-01-09 09:03:46] 2026-01-09 08:02:53,447 | INFO     | current chi2=0.9695004789137083 (change=61.086404133955696 %)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,448 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,449 | INFO     | sum of deviations: -45673677104.99999
[2026-01-09 09:03:46] 2026-01-09 08:02:53,449 | INFO     | mean x: 1767941275.5
[2026-01-09 09:03:46] 2026-01-09 08:02:53,449 | INFO     | mean y: 2560521.3378378376
[2026-01-09 09:03:46] 2026-01-09 08:02:53,449 | INFO     | intersect: 80334836205.18185
[2026-01-09 09:03:46] 2026-01-09 08:02:53,449 | INFO     | chi2: 0.9340978824407878
[2026-01-09 09:03:46] 2026-01-09 08:02:53,450 | INFO     | current chi2=0.9340978824407878 (change=3.651632695693747 %)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,450 | INFO     | left removable region: 20
[2026-01-09 09:03:46] 2026-01-09 08:02:53,450 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,451 | INFO     | sum of deviations: -25098612992.000004
[2026-01-09 09:03:46] 2026-01-09 08:02:53,451 | INFO     | mean x: 1767941245.0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,451 | INFO     | mean y: 2567770.527559055
[2026-01-09 09:03:46] 2026-01-09 08:02:53,451 | INFO     | intersect: 69866799892.08774
[2026-01-09 09:03:46] 2026-01-09 08:02:53,452 | INFO     | chi2: 0.13170648547443714
[2026-01-09 09:03:46] 2026-01-09 08:02:53,452 | INFO     | current memory leak: -39.52 B/s (using 127 data points, chi2=0.13)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,452 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | ..............................
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | . Timing measurements:
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | . get job = 0 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | . initial setup = 2 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | . payload setup = 8 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | . stage-in = 0 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | . payload execution = 9589 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,453 | INFO     | . stage-out = 1 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,454 | INFO     | . log creation = 0 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,454 | INFO     | ..............................
[2026-01-09 09:03:46] 2026-01-09 08:02:53,613 | INFO     | 
[2026-01-09 09:03:46] 2026-01-09 08:02:53,614 | INFO     | job summary report
[2026-01-09 09:03:46] 2026-01-09 08:02:53,614 | INFO     | --------------------------------------------------
[2026-01-09 09:03:46] 2026-01-09 08:02:53,614 | INFO     | PanDA job id: 6962920165
[2026-01-09 09:03:46] 2026-01-09 08:02:53,614 | INFO     | task id: 47898826
[2026-01-09 09:03:46] 2026-01-09 08:02:53,614 | INFO     | errors: (none)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,614 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:03:46] 2026-01-09 08:02:53,614 | INFO     | pilot state: finished 
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | transexitcode: 0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | exeerrorcode: 0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | exeerrordiag: 
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | exitcode: 0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | exitmsg: OK
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | cpuconsumptiontime: 72042 s
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | nevents: 400
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | neventsw: 0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | pid: 20440
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | pgrp: 20440
[2026-01-09 09:03:46] 2026-01-09 08:02:53,615 | INFO     | corecount: 8
[2026-01-09 09:03:46] 2026-01-09 08:02:53,616 | INFO     | event service: False
[2026-01-09 09:03:46] 2026-01-09 08:02:53,616 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 9602: 2312493, 9603: 2321675, 9611: 2321813}
[2026-01-09 09:03:46] 2026-01-09 08:02:53,616 | INFO     | --------------------------------------------------
[2026-01-09 09:03:46] 2026-01-09 08:02:53,616 | INFO     | 
[2026-01-09 09:03:46] 2026-01-09 08:02:53,616 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-09 09:03:46] 2026-01-09 08:02:53,643 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,644 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,644 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,644 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,646 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,646 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:03:46] 2026-01-09 08:02:53,646 | INFO     | job 6962920165 has completed (purged errors)
[2026-01-09 09:03:46] 2026-01-09 08:02:53,646 | INFO     | overall cleanup function is called
[2026-01-09 09:03:46] 2026-01-09 08:02:54,655 | INFO     | --- collectZombieJob: --- 10, [20440]
[2026-01-09 09:03:46] 2026-01-09 08:02:54,655 | INFO     | zombie collector waiting for pid 20440
[2026-01-09 09:03:46] 2026-01-09 08:02:54,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:03:46] 2026-01-09 08:02:54,655 | INFO     | collected zombie processes
[2026-01-09 09:03:46] 2026-01-09 08:02:54,655 | INFO     | will attempt to kill all subprocesses of pid=20440
[2026-01-09 09:03:46] 2026-01-09 08:02:54,719 | INFO     | process IDs to be killed: [20440] (in reverse order)
[2026-01-09 09:03:46] 2026-01-09 08:02:54,777 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:03:46] 2026-01-09 08:02:54,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:03:46] 2026-01-09 08:02:54,780 | INFO     | did not find any defunct processes belonging to 20440
[2026-01-09 09:03:46] 2026-01-09 08:02:54,781 | INFO     | did not find any defunct processes belonging to 20440
[2026-01-09 09:03:46] 2026-01-09 08:02:54,782 | INFO     | ready for new job
[2026-01-09 09:03:46] 2026-01-09 08:02:54,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:03:46] 2026-01-09 08:02:54,784 | INFO     | ***************************************
[2026-01-09 09:03:46] 2026-01-09 08:02:54,784 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:03:46] 2026-01-09 08:02:54,784 | INFO     | ***************************************
[2026-01-09 09:03:46] 2026-01-09 08:02:54,784 | INFO     | 
[2026-01-09 09:03:46] 2026-01-09 08:02:54,785 | INFO     | pilot is running in a VM
[2026-01-09 09:03:46] 2026-01-09 08:02:54,785 | INFO     | architecture information:
[2026-01-09 09:03:46] 2026-01-09 08:02:54,785 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:03:46] 2026-01-09 08:02:54,813 | INFO     | cat /etc/os-release:
[2026-01-09 09:03:46] NAME="CentOS Linux"
[2026-01-09 09:03:46] VERSION="7 (Core)"
[2026-01-09 09:03:46] ID="centos"
[2026-01-09 09:03:46] ID_LIKE="rhel fedora"
[2026-01-09 09:03:46] VERSION_ID="7"
[2026-01-09 09:03:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:03:46] ANSI_COLOR="0;31"
[2026-01-09 09:03:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:03:46] HOME_URL="https://www.centos.org/"
[2026-01-09 09:03:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:03:46] 
[2026-01-09 09:03:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:03:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:03:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:03:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:03:46] 
[2026-01-09 09:03:46] 2026-01-09 08:02:54,814 | INFO     | ***************************************
[2026-01-09 09:03:46] 2026-01-09 08:02:55,315 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-09 09:03:46] 2026-01-09 08:02:55,335 | INFO     | sufficient remaining disk space (498128125952 B)
[2026-01-09 09:03:46] 2026-01-09 08:02:55,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:03:46] 2026-01-09 08:02:55,336 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:03:46] 2026-01-09 08:02:55,336 | INFO     | update_server=False
[2026-01-09 09:03:46] 2026-01-09 08:02:55,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:03:46] 2026-01-09 08:02:55,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:03:46] 2026-01-09 08:02:55,509 | INFO     | all data control threads have been joined
[2026-01-09 09:03:46] 2026-01-09 08:02:55,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:03:46] 2026-01-09 08:02:55,738 | INFO     | aborting loop
[2026-01-09 09:03:46] 2026-01-09 08:02:55,757 | INFO     | all job control threads have been joined
[2026-01-09 09:03:46] 2026-01-09 08:02:56,342 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:56,343 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:56,380 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:56,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:03:46] 2026-01-09 08:02:56,515 | INFO     | [data] control thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:56,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:03:46] 2026-01-09 08:02:56,744 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:56,763 | INFO     | [job] control thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:56,802 | INFO     | all payload control threads have been joined
[2026-01-09 09:03:46] 2026-01-09 08:02:56,852 | INFO     | [job] validate thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:57,061 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:57,108 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:57,240 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:57,243 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:57,456 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:57,744 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:57,808 | INFO     | [payload] control thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:02:58,497 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:03:00,601 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:03:46] 2026-01-09 08:03:24,937 | INFO     | PID=14005 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 09:03:46] 2026-01-09 08:03:24,937 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:03:46] 2026-01-09 08:03:24,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:03:46] 2026-01-09 08:03:24,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:03:46] 2026-01-09 08:03:40,327 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:03:46] 2026-01-09 08:03:41,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496019810112)>', '<ExcThread(monitor, started 140495216961280)>']
[2026-01-09 09:03:46] 2026-01-09 08:03:42,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:03:46] 2026-01-09 08:03:42,027 | INFO     | [monitor] control thread has ended
[2026-01-09 09:03:46] 2026-01-09 08:03:46,263 | INFO     | all workflow threads have been joined
[2026-01-09 09:03:46] 2026-01-09 08:03:46,264 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:03:46] 2026-01-09 08:03:46,264 | INFO     | traces error code: 0
[2026-01-09 09:03:46] 2026-01-09 08:03:46,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:03:46] 2026-01-09 08:03:46,409 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:03:46] 2026-01-09 08:03:46,413 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:03:46] 2026-01-09 08:03:46,416 [wrapper] pilotpid: 14005
[2026-01-09 09:03:46] 2026-01-09 08:03:46,420 [wrapper] Pilot exit status: 0
[2026-01-09 09:03:46] 2026-01-09 08:03:46,444 [wrapper] pandaids: 6962920165
[2026-01-09 09:03:46] 2026-01-09 08:03:46,482 [wrapper] cleanup supervisor_pilot  4791 14006
[2026-01-09 09:03:46] 2026-01-09 08:03:46,488 [wrapper] Test setup, not cleaning
[2026-01-09 09:03:46] 2026-01-09 08:03:46,495 [wrapper] apfmon messages muted
[2026-01-09 09:03:46] 2026-01-09 08:03:46,499 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:03:46] 2026-01-09 08:03:46,503 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:03:46]  *** Error codes and diagnostics ***
[2026-01-09 09:03:46]     "exeErrorCode": 0,
[2026-01-09 09:03:46]     "exeErrorDiag": "",
[2026-01-09 09:03:46]     "pilotErrorCode": 0,
[2026-01-09 09:03:46]     "pilotErrorDiag": "",
[2026-01-09 09:03:46]  *** Listing of results directory ***
[2026-01-09 09:03:46] total 435216
[2026-01-09 09:03:46] -rwx------. 1 boinc boinc     36322 Jan  8 09:07 runpilot2-wrapper.sh
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc       100 Jan  9 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:03:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 06:22 run_atlas
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc       105 Jan  9 06:22 job.xml
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc      6389 Jan  9 06:22 init_data.xml
[2026-01-09 09:03:46] -rw-r--r--. 2 boinc boinc 226669442 Jan  9 06:22 EVNT.47898824._000826.pool.root.1
[2026-01-09 09:03:46] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:22 start_atlas.sh
[2026-01-09 09:03:46] drwxrwx--x. 2 boinc boinc        68 Jan  9 06:22 shared
[2026-01-09 09:03:46] -rw-r--r--. 2 boinc boinc    592404 Jan  9 06:22 input.tar.gz
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc         0 Jan  9 06:22 boinc_lockfile
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc      2519 Jan  9 06:22 pandaJob.out
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc    989771 Jan  9 06:22 agis_schedconf.cvmfs.json
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc   1516240 Jan  9 06:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:03:46] drwx------. 5 boinc boinc      4096 Jan  9 06:22 pilot3
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc 211707180 Jan  9 09:02 HITS.47898826._021770.pool.root.1
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc       529 Jan  9 09:02 boinc_task_state.xml
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc        95 Jan  9 09:02 pilot_heartbeat.json
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc      1012 Jan  9 09:02 memory_monitor_summary.json
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc    399598 Jan  9 09:02 log.47898826._021770.job.log.tgz.1
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc      7772 Jan  9 09:02 heartbeat.json
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:03 boinc_mmap_file
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc        27 Jan  9 09:03 wrapper_checkpoint.txt
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc      4809 Jan  9 09:03 pilotlog.txt
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc   1292174 Jan  9 09:03 log.47898826._021770.job.log.1
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc       357 Jan  9 09:03 output.list
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc       620 Jan  9 09:03 runtime_log
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc   1710080 Jan  9 09:03 result.tar.gz
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc       652 Jan  9 09:03 uyfMDmkE0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMneKDmcG6sXo.diag
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc      8816 Jan  9 09:03 runtime_log.err
[2026-01-09 09:03:46] -rw-r--r--. 1 boinc boinc     20855 Jan  9 09:03 stderr.txt
[2026-01-09 09:03:46] HITS file was successfully produced:
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc 211707180 Jan  9 09:02 shared/HITS.pool.root.1
[2026-01-09 09:03:46]  *** Contents of shared directory: ***
[2026-01-09 09:03:46] total 430376
[2026-01-09 09:03:46] -rw-r--r--. 2 boinc boinc 226669442 Jan  9 06:22 ATLAS.root_0
[2026-01-09 09:03:46] -rw-r--r--. 2 boinc boinc     15847 Jan  9 06:22 start_atlas.sh
[2026-01-09 09:03:46] -rw-r--r--. 2 boinc boinc    592404 Jan  9 06:22 input.tar.gz
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc 211707180 Jan  9 09:02 HITS.pool.root.1
[2026-01-09 09:03:46] -rw-------. 1 boinc boinc   1710080 Jan  9 09:03 result.tar.gz
09:03:48 (10239): run_atlas exited; CPU time 72108.652631
09:03:48 (10239): called boinc_finish(0)

</stderr_txt>
]]>

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