Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:17:59 (3800870): wrapper (7.7.26015): starting
06:17:59 (3800870): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 06:17:59] Arguments: --nthreads 4
[2026-01-11 06:17:59] Threads: 4
[2026-01-11 06:17:59] Checking for CVMFS
[2026-01-11 06:17:59] No cvmfs_config command found, will try listing directly
[2026-01-11 06:17:59] CVMFS is ok
[2026-01-11 06:17:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 06:17:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 06:17:59] Further information can be found at the LHC@home message board.
[2026-01-11 06:17:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 06:17:59] Checking for apptainer binary...
[2026-01-11 06:17:59] which: no apptainer in ((null))
[2026-01-11 06:17:59] apptainer is not installed, using version from CVMFS
[2026-01-11 06:17:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 06:18:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-11 06:18:00] apptainer works
[2026-01-11 06:18:00] Set ATHENA_PROC_NUMBER=4
[2026-01-11 06:18:00] Set ATHENA_CORE_NUMBER=4
[2026-01-11 06:18:00] Starting ATLAS job with PandaID=6963148398
[2026-01-11 06:18:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 10:13:50]  *** The last 200 lines of the pilot log: ***
[2026-01-11 10:13:50] 2026-01-11 09:12:40,626 | INFO     | monitor loop #961: job 0:6963148398 is in state 'finished'
[2026-01-11 10:13:50] 2026-01-11 09:12:40,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:13:50] 2026-01-11 09:12:41,760 | INFO     | time since job start (14068s) is within the limit (349056.0s)
[2026-01-11 10:13:50] 2026-01-11 09:12:43,129 | INFO     | monitor loop #962: job 0:6963148398 is in state 'finished'
[2026-01-11 10:13:50] 2026-01-11 09:12:43,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:13:50] 2026-01-11 09:12:43,766 | INFO     | time since job start (14070s) is within the limit (349056.0s)
[2026-01-11 10:13:50] 2026-01-11 09:12:45,632 | INFO     | monitor loop #963: job 0:6963148398 is in state 'finished'
[2026-01-11 10:13:50] 2026-01-11 09:12:45,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:13:50] 2026-01-11 09:12:45,771 | INFO     | time since job start (14072s) is within the limit (349056.0s)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,771 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 10:13:50] 2026-01-11 09:12:46,792 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2621.4203515625
[2026-01-11 10:13:50] 2026-01-11 09:12:46,817 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6963148398/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,818 | INFO     | extracted standard info from prmon json
[2026-01-11 10:13:50] 2026-01-11 09:12:46,818 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 10:13:50] 2026-01-11 09:12:46,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 10:13:50] 2026-01-11 09:12:46,819 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 10:13:50] 2026-01-11 09:12:46,819 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 10:13:50] 2026-01-11 09:12:46,823 | INFO     | fitting pss+swap vs Time
[2026-01-11 10:13:50] 2026-01-11 09:12:46,823 | INFO     | sum of square deviations: 3772712597.5
[2026-01-11 10:13:50] 2026-01-11 09:12:46,825 | INFO     | sum of deviations: 240885492.5000042
[2026-01-11 10:13:50] 2026-01-11 09:12:46,825 | INFO     | mean x: 1768115711.5
[2026-01-11 10:13:50] 2026-01-11 09:12:46,825 | INFO     | mean y: 2346698.3260869565
[2026-01-11 10:13:50] 2026-01-11 09:12:46,825 | INFO     | intersect: -110546455.59290113
[2026-01-11 10:13:50] 2026-01-11 09:12:46,826 | INFO     | chi2: 1.2755878613847622
[2026-01-11 10:13:50] 2026-01-11 09:12:46,826 | INFO     | sum of square deviations: 3531973200.0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,828 | INFO     | sum of deviations: 478148682.9999993
[2026-01-11 10:13:50] 2026-01-11 09:12:46,828 | INFO     | mean x: 1768115559.0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,828 | INFO     | mean y: 2346848.648888889
[2026-01-11 10:13:50] 2026-01-11 09:12:46,828 | INFO     | intersect: -237015705.3839836
[2026-01-11 10:13:50] 2026-01-11 09:12:46,828 | INFO     | chi2: 1.2758835844540675
[2026-01-11 10:13:50] 2026-01-11 09:12:46,828 | INFO     | current chi2=1.2758835844540675 (change=-0.023183277158518933 %)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,829 | INFO     | right removable region: 224
[2026-01-11 10:13:50] 2026-01-11 09:12:46,829 | INFO     | sum of square deviations: 3531973200.0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,830 | INFO     | sum of deviations: -25694431101.999996
[2026-01-11 10:13:50] 2026-01-11 09:12:46,830 | INFO     | mean x: 1768115864.0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,830 | INFO     | mean y: 2362911.831111111
[2026-01-11 10:13:50] 2026-01-11 09:12:46,831 | INFO     | intersect: 12865068452.150953
[2026-01-11 10:13:50] 2026-01-11 09:12:46,831 | INFO     | chi2: 0.03813694558131309
[2026-01-11 10:13:50] 2026-01-11 09:12:46,831 | INFO     | current chi2=0.03813694558131309 (change=97.01024549262233 %)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,832 | INFO     | sum of square deviations: 3301699115.0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,833 | INFO     | sum of deviations: -22800283296.000004
[2026-01-11 10:13:50] 2026-01-11 09:12:46,833 | INFO     | mean x: 1768116016.5
[2026-01-11 10:13:50] 2026-01-11 09:12:46,833 | INFO     | mean y: 2360982.6272727274
[2026-01-11 10:13:50] 2026-01-11 09:12:46,833 | INFO     | intersect: 12212300372.090694
[2026-01-11 10:13:50] 2026-01-11 09:12:46,834 | INFO     | chi2: 0.034376556141358455
[2026-01-11 10:13:50] 2026-01-11 09:12:46,834 | INFO     | current chi2=0.034376556141358455 (change=9.860227091173263 %)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,834 | INFO     | left removable region: 20
[2026-01-11 10:13:50] 2026-01-11 09:12:46,834 | INFO     | sum of square deviations: 2632440055.0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,836 | INFO     | sum of deviations: -16371365470.5
[2026-01-11 10:13:50] 2026-01-11 09:12:46,836 | INFO     | mean x: 1768116138.5
[2026-01-11 10:13:50] 2026-01-11 09:12:46,836 | INFO     | mean y: 2357396.2303921566
[2026-01-11 10:13:50] 2026-01-11 09:12:46,836 | INFO     | intersect: 10998419943.862724
[2026-01-11 10:13:50] 2026-01-11 09:12:46,836 | INFO     | chi2: 0.029568118158869523
[2026-01-11 10:13:50] 2026-01-11 09:12:46,836 | INFO     | current memory leak: -6.22 B/s (using 204 data points, chi2=0.03)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | could have reported an average CPU frequency of 2698 MHz (11 samples)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | ..............................
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | . Timing measurements:
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | . get job = 0 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | . initial setup = 1 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | . payload setup = 8 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | . stage-in = 0 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | . payload execution = 14031 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,837 | INFO     | . stage-out = 1 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,838 | INFO     | . log creation = 0 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,838 | INFO     | ..............................
[2026-01-11 10:13:50] 2026-01-11 09:12:46,930 | INFO     | 
[2026-01-11 10:13:50] 2026-01-11 09:12:46,930 | INFO     | job summary report
[2026-01-11 10:13:50] 2026-01-11 09:12:46,930 | INFO     | --------------------------------------------------
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | PanDA job id: 6963148398
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | task id: 47898826
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | errors: (none)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | pilot state: finished 
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | transexitcode: 0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | exeerrorcode: 0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | exeerrordiag: 
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | exitcode: 0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | exitmsg: OK
[2026-01-11 10:13:50] 2026-01-11 09:12:46,931 | INFO     | cpuconsumptiontime: 53916 s
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | nevents: 400
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | neventsw: 0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | pid: 3826162
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | pgrp: 3826162
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | corecount: 4
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | event service: False
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | sizes: {0: 2283983, 1: 2283983, 7: 2284273, 11: 2284301, 14045: 2315440, 14046: 2324462, 14049: 2324646, 14056: 2324840}
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | --------------------------------------------------
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | 
[2026-01-11 10:13:50] 2026-01-11 09:12:46,932 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2026-01-11 10:13:50] 2026-01-11 09:12:46,966 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,966 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,966 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,966 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,967 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,968 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 10:13:50] 2026-01-11 09:12:46,968 | INFO     | job 6963148398 has completed (purged errors)
[2026-01-11 10:13:50] 2026-01-11 09:12:46,968 | INFO     | overall cleanup function is called
[2026-01-11 10:13:50] 2026-01-11 09:12:47,977 | INFO     | --- collectZombieJob: --- 10, [3826162]
[2026-01-11 10:13:50] 2026-01-11 09:12:47,977 | INFO     | zombie collector waiting for pid 3826162
[2026-01-11 10:13:50] 2026-01-11 09:12:47,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 10:13:50] 2026-01-11 09:12:47,978 | INFO     | collected zombie processes
[2026-01-11 10:13:50] 2026-01-11 09:12:47,978 | INFO     | will attempt to kill all subprocesses of pid=3826162
[2026-01-11 10:13:50] 2026-01-11 09:12:48,825 | INFO     | process IDs to be killed: [3826162] (in reverse order)
[2026-01-11 10:13:50] 2026-01-11 09:12:49,067 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 10:13:50] 2026-01-11 09:12:49,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 10:13:50] 2026-01-11 09:12:49,103 | INFO     | did not find any defunct processes belonging to 3826162
[2026-01-11 10:13:50] 2026-01-11 09:12:49,135 | INFO     | did not find any defunct processes belonging to 3826162
[2026-01-11 10:13:50] 2026-01-11 09:12:49,136 | INFO     | ready for new job
[2026-01-11 10:13:50] 2026-01-11 09:12:49,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 10:13:50] 2026-01-11 09:12:49,139 | INFO     | ***************************************
[2026-01-11 10:13:50] 2026-01-11 09:12:49,139 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 10:13:50] 2026-01-11 09:12:49,139 | INFO     | ***************************************
[2026-01-11 10:13:50] 2026-01-11 09:12:49,139 | INFO     | 
[2026-01-11 10:13:50] 2026-01-11 09:12:49,148 | INFO     | architecture information:
[2026-01-11 10:13:50] 2026-01-11 09:12:49,148 | INFO     | executing command: cat /etc/os-release
[2026-01-11 10:13:50] 2026-01-11 09:12:49,170 | INFO     | cat /etc/os-release:
[2026-01-11 10:13:50] NAME="CentOS Linux"
[2026-01-11 10:13:50] VERSION="7 (Core)"
[2026-01-11 10:13:50] ID="centos"
[2026-01-11 10:13:50] ID_LIKE="rhel fedora"
[2026-01-11 10:13:50] VERSION_ID="7"
[2026-01-11 10:13:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 10:13:50] ANSI_COLOR="0;31"
[2026-01-11 10:13:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 10:13:50] HOME_URL="https://www.centos.org/"
[2026-01-11 10:13:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 10:13:50] 
[2026-01-11 10:13:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 10:13:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 10:13:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 10:13:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 10:13:50] 
[2026-01-11 10:13:50] 2026-01-11 09:12:49,170 | INFO     | ***************************************
[2026-01-11 10:13:50] 2026-01-11 09:12:49,673 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2026-01-11 10:13:50] 2026-01-11 09:12:49,696 | INFO     | sufficient remaining disk space (3345180786688 B)
[2026-01-11 10:13:50] 2026-01-11 09:12:49,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 10:13:50] 2026-01-11 09:12:49,697 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 10:13:50] 2026-01-11 09:12:49,697 | INFO     | update_server=False
[2026-01-11 10:13:50] 2026-01-11 09:12:49,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 10:13:50] 2026-01-11 09:12:49,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:13:50] 2026-01-11 09:12:49,698 | INFO     | aborting loop
[2026-01-11 10:13:50] 2026-01-11 09:12:50,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 10:13:50] 2026-01-11 09:12:50,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 10:13:50] 2026-01-11 09:12:50,617 | INFO     | all data control threads have been joined
[2026-01-11 10:13:50] 2026-01-11 09:12:50,684 | INFO     | all job control threads have been joined
[2026-01-11 10:13:50] 2026-01-11 09:12:50,699 | INFO     | [job] retrieve thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:50,700 | INFO     | [job] job monitor thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:50,798 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:50,942 | INFO     | [payload] validate_post thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,088 | INFO     | [data] copytool_in thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,197 | INFO     | all payload control threads have been joined
[2026-01-11 10:13:50] 2026-01-11 09:12:51,367 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,534 | INFO     | [job] validate thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,567 | INFO     | [payload] failed_post thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,580 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,622 | INFO     | [data] control thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,686 | INFO     | [job] control thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,779 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:51,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:13:50] 2026-01-11 09:12:52,168 | INFO     | [data] copytool_out thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:52,202 | INFO     | [payload] control thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:52,948 | INFO     | [job] queue monitor thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:12:54,580 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 10:13:50] 2026-01-11 09:13:19,842 | INFO     | PID=3808368 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 10:13:50] 2026-01-11 09:13:19,842 | INFO     | .. there are 9 such processes running
[2026-01-11 10:13:50] 2026-01-11 09:13:19,843 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 10:13:50] 2026-01-11 09:13:19,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 10:13:50] 2026-01-11 09:13:19,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 10:13:50] 2026-01-11 09:13:35,606 | INFO     | [monitor] cgroup control has ended
[2026-01-11 10:13:50] 2026-01-11 09:13:36,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23394999174976)>', '<ExcThread(monitor, started 23394760226560)>']
[2026-01-11 10:13:50] 2026-01-11 09:13:36,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 10:13:50] 2026-01-11 09:13:36,929 | INFO     | [monitor] control thread has ended
[2026-01-11 10:13:50] 2026-01-11 09:13:41,184 | INFO     | all workflow threads have been joined
[2026-01-11 10:13:50] 2026-01-11 09:13:41,184 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 10:13:50] 2026-01-11 09:13:41,185 | INFO     | traces error code: 0
[2026-01-11 10:13:50] 2026-01-11 09:13:41,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 10:13:50] 2026-01-11 09:13:41,414 [wrapper] ==== pilot stdout END ====
[2026-01-11 10:13:50] 2026-01-11 09:13:41,418 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 10:13:50] 2026-01-11 09:13:41,422 [wrapper] pilotpid: 3808368
[2026-01-11 10:13:50] 2026-01-11 09:13:41,429 [wrapper] Pilot exit status: 0
[2026-01-11 10:13:50] 2026-01-11 09:13:41,444 [wrapper] pandaids: 6963148398
[2026-01-11 10:13:50] 2026-01-11 09:13:41,630 [wrapper] cleanup supervisor_pilot  169309 3808369
[2026-01-11 10:13:50] 2026-01-11 09:13:41,635 [wrapper] Test setup, not cleaning
[2026-01-11 10:13:50] 2026-01-11 09:13:41,640 [wrapper] apfmon messages muted
[2026-01-11 10:13:50] 2026-01-11 09:13:41,644 [wrapper] ==== wrapper stdout END ====
[2026-01-11 10:13:50] 2026-01-11 09:13:41,648 [wrapper] ==== wrapper stderr END ====
[2026-01-11 10:13:50]  *** Error codes and diagnostics ***
[2026-01-11 10:13:50]     "exeErrorCode": 0,
[2026-01-11 10:13:50]     "exeErrorDiag": "",
[2026-01-11 10:13:50]     "pilotErrorCode": 0,
[2026-01-11 10:13:50]     "pilotErrorDiag": "",
[2026-01-11 10:13:50]  *** Listing of results directory ***
[2026-01-11 10:13:51] total 446996
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-11 10:13:51] -rwx------ 1 boinc boinc     36322 Jan  8 17:05 runpilot2-wrapper.sh
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:07 queuedata.json
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc       100 Jan 11 06:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 10:13:51] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 06:17 run_atlas
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc       105 Jan 11 06:17 job.xml
[2026-01-11 10:13:51] -rw-r--r-- 2 boinc boinc 226069866 Jan 11 06:17 EVNT.47898824._001107.pool.root.1
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc      6692 Jan 11 06:17 init_data.xml
[2026-01-11 10:13:51] -rw-r--r-- 2 boinc boinc     15847 Jan 11 06:17 start_atlas.sh
[2026-01-11 10:13:51] drwxrwx--x 2 boinc boinc      4096 Jan 11 06:17 shared
[2026-01-11 10:13:51] -rw-r--r-- 2 boinc boinc    592402 Jan 11 06:17 input.tar.gz
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc         0 Jan 11 06:17 boinc_lockfile
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc      2520 Jan 11 06:18 pandaJob.out
[2026-01-11 10:13:51] -rw------- 1 boinc boinc    989548 Jan 11 06:18 agis_schedconf.cvmfs.json
[2026-01-11 10:13:51] drwx------ 5 boinc boinc      4096 Jan 11 06:18 pilot3
[2026-01-11 10:13:51] -rw------- 1 boinc boinc 223007623 Jan 11 10:11 HITS.47898826._028069.pool.root.1
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc       529 Jan 11 10:12 boinc_task_state.xml
[2026-01-11 10:13:51] -rw------- 1 boinc boinc      1034 Jan 11 10:12 memory_monitor_summary.json
[2026-01-11 10:13:51] -rw------- 1 boinc boinc   1516240 Jan 11 10:12 agis_ddmendpoints.agis.ALL.json
[2026-01-11 10:13:51] -rw------- 1 boinc boinc    412873 Jan 11 10:12 log.47898826._028069.job.log.tgz.1
[2026-01-11 10:13:51] -rw------- 1 boinc boinc      7795 Jan 11 10:12 heartbeat.json
[2026-01-11 10:13:51] -rw------- 1 boinc boinc        95 Jan 11 10:13 pilot_heartbeat.json
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc        27 Jan 11 10:13 wrapper_checkpoint.txt
[2026-01-11 10:13:51] -rw------- 1 boinc boinc      4835 Jan 11 10:13 pilotlog.txt
[2026-01-11 10:13:51] -rw------- 1 boinc boinc   1951389 Jan 11 10:13 log.47898826._028069.job.log.1
[2026-01-11 10:13:51] -rw------- 1 boinc boinc       357 Jan 11 10:13 output.list
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc       620 Jan 11 10:13 runtime_log
[2026-01-11 10:13:51] -rw------- 1 boinc boinc   2385920 Jan 11 10:13 result.tar.gz
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc      9223 Jan 11 10:13 runtime_log.err
[2026-01-11 10:13:51] -rw------- 1 boinc boinc       666 Jan 11 10:13 2oGODmDh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb1kKDmlkzRfn.diag
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc      8192 Jan 11 10:13 boinc_mmap_file
[2026-01-11 10:13:51] -rw-r--r-- 1 boinc boinc     21152 Jan 11 10:13 stderr.txt
[2026-01-11 10:13:51] HITS file was successfully produced:
[2026-01-11 10:13:51] -rw------- 1 boinc boinc 223007623 Jan 11 10:11 shared/HITS.pool.root.1
[2026-01-11 10:13:51]  *** Contents of shared directory: ***
[2026-01-11 10:13:51] total 441492
[2026-01-11 10:13:51] -rw-r--r-- 2 boinc boinc 226069866 Jan 11 06:17 ATLAS.root_0
[2026-01-11 10:13:51] -rw-r--r-- 2 boinc boinc     15847 Jan 11 06:17 start_atlas.sh
[2026-01-11 10:13:51] -rw-r--r-- 2 boinc boinc    592402 Jan 11 06:17 input.tar.gz
[2026-01-11 10:13:51] -rw------- 1 boinc boinc 223007623 Jan 11 10:11 HITS.pool.root.1
[2026-01-11 10:13:51] -rw------- 1 boinc boinc   2385920 Jan 11 10:13 result.tar.gz
10:13:52 (3800870): run_atlas exited; CPU time 54875.773235
10:13:52 (3800870): called boinc_finish(0)

</stderr_txt>
]]>

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