Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:08:04 (2316657): wrapper (7.7.26015): starting
07:08:04 (2316657): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 07:08:04] Arguments: --nthreads 3
[2026-01-09 07:08:04] Threads: 3
[2026-01-09 07:08:04] Checking for CVMFS
[2026-01-09 07:08:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:08:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:08:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:08:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:08:05] 2.9.2.0 1875816 1835 80068 154933 0 57 34970291 36864001 0 130560 0 1165100 99.988 70167 3555 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 07:08:05] CVMFS is ok
[2026-01-09 07:08:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:08:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:08:05] Further information can be found at the LHC@home message board.
[2026-01-09 07:08:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:08:05] Checking for apptainer binary...
[2026-01-09 07:08:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:08:05] Running /usr/bin/apptainer --version
[2026-01-09 07:08:05] apptainer version 1.4.1-1.1
[2026-01-09 07:08:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:08:05] atlasA091
[2026-01-09 07:08:05] apptainer works
[2026-01-09 07:08:05] Set ATHENA_PROC_NUMBER=3
[2026-01-09 07:08:05] Set ATHENA_CORE_NUMBER=3
[2026-01-09 07:08:05] Starting ATLAS job with PandaID=6963151854
[2026-01-09 07:08:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:04:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:04:46] 2026-01-09 08:04:13,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,732 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:04:46] 2026-01-09 08:04:13,733 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3556.3312499999997
[2026-01-09 09:04:46] 2026-01-09 08:04:13,734 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963151854/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,734 | INFO     | extracted standard info from prmon json
[2026-01-09 09:04:46] 2026-01-09 08:04:13,734 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:04:46] 2026-01-09 08:04:13,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:04:46] 2026-01-09 08:04:13,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:04:46] 2026-01-09 08:04:13,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:04:46] 2026-01-09 08:04:13,735 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:04:46] 2026-01-09 08:04:13,735 | INFO     | sum of square deviations: 459366752.5
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | sum of deviations: 10179814230.500002
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | mean x: 1767942357.5
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | mean y: 2337009.7280701753
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | intersect: -39176216230.43535
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | chi2: 1.4966713814352595
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | sum of square deviations: 401533110.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | sum of deviations: 9551413428.000004
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | mean x: 1767942205.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | mean y: 2335351.5963302753
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | intersect: -42052345809.72792
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | chi2: 1.4995773133094534
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | current chi2=1.4995773133094534 (change=-0.19415964721709805 %)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | right removable region: 108
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | sum of square deviations: 401533110.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,736 | INFO     | sum of deviations: -2466441303.999999
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | mean x: 1767942510.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | mean y: 2369323.9633027525
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | intersect: 10862062637.327751
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | chi2: 0.08990107583972391
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | current chi2=0.08990107583972391 (change=93.99326552542806 %)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | sum of square deviations: 348769330.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | sum of deviations: 1984244935.5
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | mean x: 1767942662.5
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | mean y: 2356588.875
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | intersect: -10055956951.251968
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | chi2: 0.002562026400918906
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | current chi2=0.002562026400918906 (change=97.15017158917375 %)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | sum of square deviations: 300842850.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | sum of deviations: 1395985793.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | mean x: 1767942815.0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | mean y: 2358456.373737374
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | intersect: -8201336770.4745245
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | chi2: 0.0021049972468803646
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | current chi2=0.0021049972468803646 (change=17.83858097147717 %)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,737 | INFO     | left removable region: 30
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | sum of square deviations: 147126479.5
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | sum of deviations: 232484267.5
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | mean x: 1767943089.5
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | mean y: 2361445.8076923075
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | intersect: -2791282197.0016527
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | chi2: 0.0014445853133309794
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | current memory leak: 1.58 B/s (using 78 data points, chi2=0.00)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | could have reported an average CPU frequency of 3908 MHz (7 samples)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | ..............................
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . Timing measurements:
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . get job = 0 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . initial setup = 1 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . payload setup = 3 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . stage-in = 0 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . payload execution = 6938 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . stage-out = 0 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | . log creation = 0 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,738 | INFO     | ..............................
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | 
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | job summary report
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | --------------------------------------------------
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | PanDA job id: 6963151854
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | task id: 47898826
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | errors: (none)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | pilot state: finished 
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | transexitcode: 0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | exeerrorcode: 0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | exeerrordiag: 
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | exitcode: 0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | exitmsg: OK
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | cpuconsumptiontime: 20239 s
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | nevents: 400
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | neventsw: 0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | pid: 2326833
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | pgrp: 2326833
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | corecount: 3
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | event service: False
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | sizes: {0: 2283974, 2: 2284236, 10: 2284264, 6945: 2320642, 6949: 2320780}
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | --------------------------------------------------
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | 
[2026-01-09 09:04:46] 2026-01-09 08:04:13,768 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,783 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:04:46] 2026-01-09 08:04:13,783 | INFO     | job 6963151854 has completed (purged errors)
[2026-01-09 09:04:46] 2026-01-09 08:04:13,783 | INFO     | overall cleanup function is called
[2026-01-09 09:04:46] 2026-01-09 08:04:14,247 | INFO     | PID=2320392 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:04:46] 2026-01-09 08:04:14,789 | INFO     | --- collectZombieJob: --- 10, [2326833]
[2026-01-09 09:04:46] 2026-01-09 08:04:14,789 | INFO     | zombie collector waiting for pid 2326833
[2026-01-09 09:04:46] 2026-01-09 08:04:14,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:04:46] 2026-01-09 08:04:14,789 | INFO     | collected zombie processes
[2026-01-09 09:04:46] 2026-01-09 08:04:14,789 | INFO     | will attempt to kill all subprocesses of pid=2326833
[2026-01-09 09:04:46] 2026-01-09 08:04:14,835 | INFO     | process IDs to be killed: [2326833] (in reverse order)
[2026-01-09 09:04:46] 2026-01-09 08:04:14,861 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:04:46] 2026-01-09 08:04:14,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:04:46] 2026-01-09 08:04:14,862 | INFO     | did not find any defunct processes belonging to 2326833
[2026-01-09 09:04:46] 2026-01-09 08:04:14,863 | INFO     | did not find any defunct processes belonging to 2326833
[2026-01-09 09:04:46] 2026-01-09 08:04:14,864 | INFO     | ready for new job
[2026-01-09 09:04:46] 2026-01-09 08:04:14,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:04:46] 2026-01-09 08:04:14,864 | INFO     | ***************************************
[2026-01-09 09:04:46] 2026-01-09 08:04:14,864 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:04:46] 2026-01-09 08:04:14,864 | INFO     | ***************************************
[2026-01-09 09:04:46] 2026-01-09 08:04:14,864 | INFO     | 
[2026-01-09 09:04:46] 2026-01-09 08:04:14,865 | INFO     | architecture information:
[2026-01-09 09:04:46] 2026-01-09 08:04:14,865 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:04:46] 2026-01-09 08:04:14,874 | INFO     | cat /etc/os-release:
[2026-01-09 09:04:46] NAME="CentOS Linux"
[2026-01-09 09:04:46] VERSION="7 (Core)"
[2026-01-09 09:04:46] ID="centos"
[2026-01-09 09:04:46] ID_LIKE="rhel fedora"
[2026-01-09 09:04:46] VERSION_ID="7"
[2026-01-09 09:04:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:04:46] ANSI_COLOR="0;31"
[2026-01-09 09:04:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:04:46] HOME_URL="https://www.centos.org/"
[2026-01-09 09:04:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:04:46] 
[2026-01-09 09:04:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:04:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:04:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:04:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:04:46] 
[2026-01-09 09:04:46] 2026-01-09 08:04:14,874 | INFO     | ***************************************
[2026-01-09 09:04:46] 2026-01-09 08:04:15,377 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | INFO     | sufficient remaining disk space (369508745216 B)
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | INFO     | update_server=False
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:04:46] 2026-01-09 08:04:15,391 | INFO     | aborting loop
[2026-01-09 09:04:46] 2026-01-09 08:04:15,399 | INFO     | all job control threads have been joined
[2026-01-09 09:04:46] 2026-01-09 08:04:15,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:04:46] 2026-01-09 08:04:16,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:04:46] 2026-01-09 08:04:16,394 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:16,394 | INFO     | all data control threads have been joined
[2026-01-09 09:04:46] 2026-01-09 08:04:16,396 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:16,396 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:16,404 | INFO     | [job] control thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:16,531 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:16,728 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:16,897 | INFO     | all payload control threads have been joined
[2026-01-09 09:04:46] 2026-01-09 08:04:16,984 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:17,400 | INFO     | [data] control thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:17,419 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:17,504 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:17,610 | INFO     | [job] validate thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:17,741 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:17,794 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:17,902 | INFO     | [payload] control thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:18,719 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:04:46] 2026-01-09 08:04:20,008 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:26,221 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:04:46] 2026-01-09 08:04:27,227 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:04:46] 2026-01-09 08:04:29,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699209144128)>', '<ExcThread(monitor, started 140698472924928)>']
[2026-01-09 09:04:46] 2026-01-09 08:04:34,069 | INFO     | all workflow threads have been joined
[2026-01-09 09:04:46] 2026-01-09 08:04:34,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:04:46] 2026-01-09 08:04:34,069 | INFO     | traces error code: 0
[2026-01-09 09:04:46] 2026-01-09 08:04:34,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:04:46] 2026-01-09 08:04:46,371 | INFO     | PID=2320392 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:04:46] 2026-01-09 08:04:46,371 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:04:46] 2026-01-09 08:04:46,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:04:46] 2026-01-09 08:04:46,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:04:46] 2026-01-09 08:04:46,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:04:46] 2026-01-09 08:04:46,371 | INFO     | [monitor] control thread has ended
[2026-01-09 09:04:46] 2026-01-09 08:04:46,419 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:04:46] 2026-01-09 08:04:46,421 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:04:46] 2026-01-09 08:04:46,423 [wrapper] pilotpid: 2320392
[2026-01-09 09:04:46] 2026-01-09 08:04:46,426 [wrapper] Pilot exit status: 0
[2026-01-09 09:04:46] 2026-01-09 08:04:46,434 [wrapper] pandaids: 6963151854
[2026-01-09 09:04:46] 2026-01-09 08:04:46,451 [wrapper] cleanup supervisor_pilot 2341830 2320393
[2026-01-09 09:04:46] 2026-01-09 08:04:46,454 [wrapper] Test setup, not cleaning
[2026-01-09 09:04:46] 2026-01-09 08:04:46,456 [wrapper] apfmon messages muted
[2026-01-09 09:04:46] 2026-01-09 08:04:46,459 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:04:46] 2026-01-09 08:04:46,461 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:04:46]  *** Error codes and diagnostics ***
[2026-01-09 09:04:46]     "exeErrorCode": 0,
[2026-01-09 09:04:46]     "exeErrorDiag": "",
[2026-01-09 09:04:46]     "pilotErrorCode": 0,
[2026-01-09 09:04:46]     "pilotErrorDiag": "",
[2026-01-09 09:04:46]  *** Listing of results directory ***
[2026-01-09 09:04:46] total 442312
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 09:04:46] -rwx------ 1 boinc boinc     36322 Jan  8 17:06 runpilot2-wrapper.sh
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:09 queuedata.json
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc       100 Jan  9 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:04:46] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 07:08 run_atlas
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc       105 Jan  9 07:08 job.xml
[2026-01-09 09:04:46] -rw-r--r-- 2 boinc boinc 223140709 Jan  9 07:08 EVNT.47898824._001128.pool.root.1
[2026-01-09 09:04:46] drwxrwx--x 2 boinc boinc      4096 Jan  9 07:08 shared
[2026-01-09 09:04:46] -rw-r--r-- 2 boinc boinc    592395 Jan  9 07:08 input.tar.gz
[2026-01-09 09:04:46] -rw-r--r-- 2 boinc boinc     15847 Jan  9 07:08 start_atlas.sh
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc         0 Jan  9 07:08 boinc_setup_complete
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc      6443 Jan  9 07:08 init_data.xml
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc         0 Jan  9 07:08 boinc_lockfile
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc      2520 Jan  9 07:08 pandaJob.out
[2026-01-09 09:04:46] -rw------- 1 boinc boinc    989771 Jan  9 07:08 agis_schedconf.cvmfs.json
[2026-01-09 09:04:46] -rw------- 1 boinc boinc   1516240 Jan  9 07:08 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:04:46] drwx------ 5 boinc boinc      4096 Jan  9 07:08 pilot3
[2026-01-09 09:04:46] -rw------- 1 boinc boinc 223310258 Jan  9 09:03 HITS.47898826._028805.pool.root.1
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc       529 Jan  9 09:03 boinc_task_state.xml
[2026-01-09 09:04:46] -rw------- 1 boinc boinc      1016 Jan  9 09:04 memory_monitor_summary.json
[2026-01-09 09:04:46] -rw------- 1 boinc boinc    276922 Jan  9 09:04 log.47898826._028805.job.log.tgz.1
[2026-01-09 09:04:46] -rw------- 1 boinc boinc      7747 Jan  9 09:04 heartbeat.json
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc      8192 Jan  9 09:04 boinc_mmap_file
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc        27 Jan  9 09:04 wrapper_checkpoint.txt
[2026-01-09 09:04:46] -rw------- 1 boinc boinc       747 Jan  9 09:04 pilotlog.txt
[2026-01-09 09:04:46] -rw------- 1 boinc boinc        95 Jan  9 09:04 pilot_heartbeat.json
[2026-01-09 09:04:46] -rw------- 1 boinc boinc   1004298 Jan  9 09:04 log.47898826._028805.job.log.1
[2026-01-09 09:04:46] -rw------- 1 boinc boinc       357 Jan  9 09:04 output.list
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc       620 Jan  9 09:04 runtime_log
[2026-01-09 09:04:46] -rw------- 1 boinc boinc   1300480 Jan  9 09:04 result.tar.gz
[2026-01-09 09:04:46] -rw------- 1 boinc boinc       662 Jan  9 09:04 sGhLDmAi7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKqfKDmszkgZm.diag
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc      8912 Jan  9 09:04 runtime_log.err
[2026-01-09 09:04:46] -rw-r--r-- 1 boinc boinc     21153 Jan  9 09:04 stderr.txt
[2026-01-09 09:04:46] HITS file was successfully produced:
[2026-01-09 09:04:46] -rw------- 1 boinc boinc 223310258 Jan  9 09:03 shared/HITS.pool.root.1
[2026-01-09 09:04:46]  *** Contents of shared directory: ***
[2026-01-09 09:04:46] total 437868
[2026-01-09 09:04:46] -rw-r--r-- 2 boinc boinc 223140709 Jan  9 07:08 ATLAS.root_0
[2026-01-09 09:04:46] -rw-r--r-- 2 boinc boinc    592395 Jan  9 07:08 input.tar.gz
[2026-01-09 09:04:46] -rw-r--r-- 2 boinc boinc     15847 Jan  9 07:08 start_atlas.sh
[2026-01-09 09:04:46] -rw------- 1 boinc boinc 223310258 Jan  9 09:03 HITS.pool.root.1
[2026-01-09 09:04:46] -rw------- 1 boinc boinc   1300480 Jan  9 09:04 result.tar.gz
09:04:47 (2316657): run_atlas exited; CPU time 20267.547708
09:04:47 (2316657): called boinc_finish(0)

</stderr_txt>
]]>

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