Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:50 (1488): wrapper (7.7.26015): starting
05:58:50 (1488): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:58:50] Arguments: --nthreads 8
[2026-01-09 05:58:50] Threads: 8
[2026-01-09 05:58:50] Checking for CVMFS
[2026-01-09 05:58:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:58:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:58:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:58:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:58:51] 2.11.2.0 32220 34966 96444 154931 3 61 17048428 25165825 0 130560 0 15084574 99.811 9284764 3929 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 05:58:51] CVMFS is ok
[2026-01-09 05:58:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:58:51] Checking for apptainer binary...
[2026-01-09 05:58:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:58:51] Running /usr/bin/apptainer --version
[2026-01-09 05:58:51] apptainer version 1.3.2-1.el7
[2026-01-09 05:58:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:58:53] cg-vwn447.simple-grid.lan
[2026-01-09 05:58:53] apptainer works
[2026-01-09 05:58:53] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:58:53] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:58:53] Starting ATLAS job with PandaID=6963147703
[2026-01-09 05:58:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:50:33]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:50:33] 2026-01-09 07:49:39,168 | INFO     | mean y: 2504489.185185185
[2026-01-09 08:50:33] 2026-01-09 07:49:39,169 | INFO     | intersect: -4451544586.045834
[2026-01-09 08:50:33] 2026-01-09 07:49:39,169 | INFO     | chi2: 0.02769299389775258
[2026-01-09 08:50:33] 2026-01-09 07:49:39,169 | INFO     | current chi2=0.02769299389775258 (change=98.095254948927 %)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,170 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,171 | INFO     | sum of deviations: 3949983385.9999995
[2026-01-09 08:50:33] 2026-01-09 07:49:39,171 | INFO     | mean x: 1767940156.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,171 | INFO     | mean y: 2503613.3757961784
[2026-01-09 08:50:33] 2026-01-09 07:49:39,171 | INFO     | intersect: -5817229482.156091
[2026-01-09 08:50:33] 2026-01-09 07:49:39,172 | INFO     | chi2: 0.012042605379670735
[2026-01-09 08:50:33] 2026-01-09 07:49:39,172 | INFO     | current chi2=0.012042605379670735 (change=56.51389147690509 %)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,172 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,173 | INFO     | sum of deviations: 3697327974.000001
[2026-01-09 08:50:33] 2026-01-09 07:49:39,174 | INFO     | mean x: 1767940308.5
[2026-01-09 08:50:33] 2026-01-09 07:49:39,174 | INFO     | mean y: 2504004.6842105263
[2026-01-09 08:50:33] 2026-01-09 07:49:39,174 | INFO     | intersect: -6000452330.376074
[2026-01-09 08:50:33] 2026-01-09 07:49:39,174 | INFO     | chi2: 0.001685364151180476
[2026-01-09 08:50:33] 2026-01-09 07:49:39,174 | INFO     | current chi2=0.001685364151180476 (change=86.00498730926151 %)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,175 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,176 | INFO     | sum of deviations: 2659813134.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,176 | INFO     | mean x: 1767940461.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,176 | INFO     | mean y: 2505521.551020408
[2026-01-09 08:50:33] 2026-01-09 07:49:39,176 | INFO     | intersect: -4771780477.845924
[2026-01-09 08:50:33] 2026-01-09 07:49:39,176 | INFO     | chi2: 0.0008060216451649008
[2026-01-09 08:50:33] 2026-01-09 07:49:39,177 | INFO     | current chi2=0.0008060216451649008 (change=52.17522310532471 %)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,177 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 08:50:33] 2026-01-09 07:49:39,178 | INFO     | sum of deviations: 1954816004.0000002
[2026-01-09 08:50:33] 2026-01-09 07:49:39,178 | INFO     | mean x: 1767940613.5
[2026-01-09 08:50:33] 2026-01-09 07:49:39,178 | INFO     | mean y: 2506627.0140845072
[2026-01-09 08:50:33] 2026-01-09 07:49:39,178 | INFO     | intersect: -3890199691.975526
[2026-01-09 08:50:33] 2026-01-09 07:49:39,179 | INFO     | chi2: 0.0004406706067678056
[2026-01-09 08:50:33] 2026-01-09 07:49:39,179 | INFO     | current chi2=0.0004406706067678056 (change=45.327695675263094 %)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,179 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,180 | INFO     | sum of deviations: 1363934501.999999
[2026-01-09 08:50:33] 2026-01-09 07:49:39,180 | INFO     | mean x: 1767940766.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,180 | INFO     | mean y: 2507622.131386861
[2026-01-09 08:50:33] 2026-01-09 07:49:39,180 | INFO     | intersect: -3021927268.853902
[2026-01-09 08:50:33] 2026-01-09 07:49:39,181 | INFO     | chi2: 0.0001378809036858374
[2026-01-09 08:50:33] 2026-01-09 07:49:39,181 | INFO     | current chi2=0.0001378809036858374 (change=68.71111856151359 %)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,181 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,182 | INFO     | sum of deviations: 1108897284.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,182 | INFO     | mean x: 1767940918.5
[2026-01-09 08:50:33] 2026-01-09 07:49:39,182 | INFO     | mean y: 2508083.272727273
[2026-01-09 08:50:33] 2026-01-09 07:49:39,183 | INFO     | intersect: -2746549111.406601
[2026-01-09 08:50:33] 2026-01-09 07:49:39,183 | INFO     | chi2: 0.00010999825224987405
[2026-01-09 08:50:33] 2026-01-09 07:49:39,183 | INFO     | current chi2=0.00010999825224987405 (change=20.22227204101749 %)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,183 | INFO     | left removable region: 70
[2026-01-09 08:50:33] 2026-01-09 07:49:39,184 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,184 | INFO     | sum of deviations: 329371025.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,184 | INFO     | mean x: 1767941803.0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,184 | INFO     | mean y: 2509329.8571428573
[2026-01-09 08:50:33] 2026-01-09 07:49:39,185 | INFO     | intersect: -2489807229.8549275
[2026-01-09 08:50:33] 2026-01-09 07:49:39,185 | INFO     | chi2: 6.045770773176687e-05
[2026-01-09 08:50:33] 2026-01-09 07:49:39,185 | INFO     | current memory leak: 1.41 B/s (using 91 data points, chi2=0.00)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,186 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,186 | INFO     | ..............................
[2026-01-09 08:50:33] 2026-01-09 07:49:39,186 | INFO     | . Timing measurements:
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | . get job = 0 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | . initial setup = 2 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | . payload setup = 9 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | . stage-in = 0 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | . payload execution = 10188 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | . stage-out = 1 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | . log creation = 0 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,189 | INFO     | ..............................
[2026-01-09 08:50:33] 2026-01-09 07:49:39,309 | INFO     | 
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | job summary report
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | --------------------------------------------------
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | PanDA job id: 6963147703
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | task id: 47898826
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | errors: (none)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | pilot state: finished 
[2026-01-09 08:50:33] 2026-01-09 07:49:39,310 | INFO     | transexitcode: 0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | exeerrorcode: 0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | exeerrordiag: 
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | exitcode: 0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | exitmsg: OK
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | cpuconsumptiontime: 76739 s
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | nevents: 400
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | neventsw: 0
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | pid: 11640
[2026-01-09 08:50:33] 2026-01-09 07:49:39,311 | INFO     | pgrp: 11640
[2026-01-09 08:50:33] 2026-01-09 07:49:39,312 | INFO     | corecount: 8
[2026-01-09 08:50:33] 2026-01-09 07:49:39,312 | INFO     | event service: False
[2026-01-09 08:50:33] 2026-01-09 07:49:39,312 | INFO     | sizes: {0: 2283798, 1: 2283997, 6: 2284259, 11: 2284287, 10201: 2312714, 10202: 2312713, 10204: 2321895, 10205: 2321951, 10211: 2322209}
[2026-01-09 08:50:33] 2026-01-09 07:49:39,312 | INFO     | --------------------------------------------------
[2026-01-09 08:50:33] 2026-01-09 07:49:39,312 | INFO     | 
[2026-01-09 08:50:33] 2026-01-09 07:49:39,312 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 08:50:33] 2026-01-09 07:49:39,346 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,348 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,348 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:50:33] 2026-01-09 07:49:39,348 | INFO     | job 6963147703 has completed (purged errors)
[2026-01-09 08:50:33] 2026-01-09 07:49:39,349 | INFO     | overall cleanup function is called
[2026-01-09 08:50:33] 2026-01-09 07:49:40,360 | INFO     | --- collectZombieJob: --- 10, [11640]
[2026-01-09 08:50:33] 2026-01-09 07:49:40,361 | INFO     | zombie collector waiting for pid 11640
[2026-01-09 08:50:33] 2026-01-09 07:49:40,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:50:33] 2026-01-09 07:49:40,361 | INFO     | collected zombie processes
[2026-01-09 08:50:33] 2026-01-09 07:49:40,361 | INFO     | will attempt to kill all subprocesses of pid=11640
[2026-01-09 08:50:33] 2026-01-09 07:49:40,428 | INFO     | process IDs to be killed: [11640] (in reverse order)
[2026-01-09 08:50:33] 2026-01-09 07:49:40,479 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:50:33] 2026-01-09 07:49:40,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:50:33] 2026-01-09 07:49:40,481 | INFO     | did not find any defunct processes belonging to 11640
[2026-01-09 08:50:33] 2026-01-09 07:49:40,483 | INFO     | did not find any defunct processes belonging to 11640
[2026-01-09 08:50:33] 2026-01-09 07:49:40,483 | INFO     | ready for new job
[2026-01-09 08:50:33] 2026-01-09 07:49:40,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:50:33] 2026-01-09 07:49:40,485 | INFO     | ***************************************
[2026-01-09 08:50:33] 2026-01-09 07:49:40,485 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:50:33] 2026-01-09 07:49:40,485 | INFO     | ***************************************
[2026-01-09 08:50:33] 2026-01-09 07:49:40,485 | INFO     | 
[2026-01-09 08:50:33] 2026-01-09 07:49:40,486 | INFO     | pilot is running in a VM
[2026-01-09 08:50:33] 2026-01-09 07:49:40,486 | INFO     | architecture information:
[2026-01-09 08:50:33] 2026-01-09 07:49:40,487 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:50:33] 2026-01-09 07:49:40,505 | INFO     | cat /etc/os-release:
[2026-01-09 08:50:33] NAME="CentOS Linux"
[2026-01-09 08:50:33] VERSION="7 (Core)"
[2026-01-09 08:50:33] ID="centos"
[2026-01-09 08:50:33] ID_LIKE="rhel fedora"
[2026-01-09 08:50:33] VERSION_ID="7"
[2026-01-09 08:50:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:50:33] ANSI_COLOR="0;31"
[2026-01-09 08:50:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:50:33] HOME_URL="https://www.centos.org/"
[2026-01-09 08:50:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:50:33] 
[2026-01-09 08:50:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:50:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:50:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:50:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:50:33] 
[2026-01-09 08:50:33] 2026-01-09 07:49:40,505 | INFO     | ***************************************
[2026-01-09 08:50:33] 2026-01-09 07:49:41,009 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 08:50:33] 2026-01-09 07:49:41,029 | INFO     | sufficient remaining disk space (498262343680 B)
[2026-01-09 08:50:33] 2026-01-09 07:49:41,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:50:33] 2026-01-09 07:49:41,030 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:50:33] 2026-01-09 07:49:41,030 | INFO     | update_server=False
[2026-01-09 08:50:33] 2026-01-09 07:49:41,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:50:33] 2026-01-09 07:49:41,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:50:33] 2026-01-09 07:49:41,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:50:33] 2026-01-09 07:49:41,158 | INFO     | all data control threads have been joined
[2026-01-09 08:50:33] 2026-01-09 07:49:41,490 | INFO     | all job control threads have been joined
[2026-01-09 08:50:33] 2026-01-09 07:49:41,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:50:33] 2026-01-09 07:49:41,999 | INFO     | aborting loop
[2026-01-09 08:50:33] 2026-01-09 07:49:42,036 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,037 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,105 | INFO     | all payload control threads have been joined
[2026-01-09 08:50:33] 2026-01-09 07:49:42,162 | INFO     | [data] control thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,202 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,281 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,420 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,496 | INFO     | [job] control thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,522 | INFO     | [job] validate thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,727 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:42,757 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:43,004 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:43,037 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:43,111 | INFO     | [payload] control thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:43,507 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:43,510 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:49:43,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:50:33] 2026-01-09 07:49:47,759 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:50:33] 2026-01-09 07:50:10,519 | INFO     | PID=5214 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 08:50:33] 2026-01-09 07:50:10,519 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:50:33] 2026-01-09 07:50:10,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:50:33] 2026-01-09 07:50:10,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:50:33] 2026-01-09 07:50:27,605 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:50:33] 2026-01-09 07:50:27,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154756007744)>', '<ExcThread(monitor, started 140154001925888)>']
[2026-01-09 08:50:33] 2026-01-09 07:50:28,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:50:33] 2026-01-09 07:50:28,613 | INFO     | [monitor] control thread has ended
[2026-01-09 08:50:33] 2026-01-09 07:50:32,737 | INFO     | all workflow threads have been joined
[2026-01-09 08:50:33] 2026-01-09 07:50:32,738 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:50:33] 2026-01-09 07:50:32,738 | INFO     | traces error code: 0
[2026-01-09 08:50:33] 2026-01-09 07:50:32,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:50:33] 2026-01-09 07:50:32,890 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:50:33] 2026-01-09 07:50:32,894 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:50:33] 2026-01-09 07:50:32,898 [wrapper] pilotpid: 5214
[2026-01-09 08:50:33] 2026-01-09 07:50:32,901 [wrapper] Pilot exit status: 0
[2026-01-09 08:50:33] 2026-01-09 07:50:32,920 [wrapper] pandaids: 6963147703
[2026-01-09 08:50:33] 2026-01-09 07:50:32,959 [wrapper] cleanup supervisor_pilot 28914 5215
[2026-01-09 08:50:33] 2026-01-09 07:50:32,966 [wrapper] Test setup, not cleaning
[2026-01-09 08:50:33] 2026-01-09 07:50:32,970 [wrapper] apfmon messages muted
[2026-01-09 08:50:33] 2026-01-09 07:50:32,974 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:50:33] 2026-01-09 07:50:32,977 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:50:33]  *** Error codes and diagnostics ***
[2026-01-09 08:50:33]     "exeErrorCode": 0,
[2026-01-09 08:50:33]     "exeErrorDiag": "",
[2026-01-09 08:50:33]     "pilotErrorCode": 0,
[2026-01-09 08:50:33]     "pilotErrorDiag": "",
[2026-01-09 08:50:33]  *** Listing of results directory ***
[2026-01-09 08:50:33] total 446572
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 08:50:33] -rwx------. 1 boinc boinc     36322 Jan  8 17:05 runpilot2-wrapper.sh
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:07 queuedata.json
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc       100 Jan  9 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:50:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 05:58 run_atlas
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc       105 Jan  9 05:58 job.xml
[2026-01-09 08:50:33] -rw-r--r--. 2 boinc boinc 225960839 Jan  9 05:58 EVNT.47898824._000824.pool.root.1
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc      6388 Jan  9 05:58 init_data.xml
[2026-01-09 08:50:33] -rw-r--r--. 2 boinc boinc     15847 Jan  9 05:58 start_atlas.sh
[2026-01-09 08:50:33] drwxrwx--x. 2 boinc boinc        68 Jan  9 05:58 shared
[2026-01-09 08:50:33] -rw-r--r--. 2 boinc boinc    592399 Jan  9 05:58 input.tar.gz
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc         0 Jan  9 05:58 boinc_lockfile
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc      2519 Jan  9 05:58 pandaJob.out
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc    989771 Jan  9 05:59 agis_schedconf.cvmfs.json
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc   1516240 Jan  9 05:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:50:33] drwx------. 5 boinc boinc      4096 Jan  9 05:59 pilot3
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc 223844319 Jan  9 08:48 HITS.47898826._027821.pool.root.1
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc       531 Jan  9 08:49 boinc_task_state.xml
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc        95 Jan  9 08:49 pilot_heartbeat.json
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc      1011 Jan  9 08:49 memory_monitor_summary.json
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc    413111 Jan  9 08:49 log.47898826._027821.job.log.tgz.1
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc      7770 Jan  9 08:49 heartbeat.json
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:50 boinc_mmap_file
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc        28 Jan  9 08:50 wrapper_checkpoint.txt
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc      4808 Jan  9 08:50 pilotlog.txt
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc   1379807 Jan  9 08:50 log.47898826._027821.job.log.1
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc       357 Jan  9 08:50 output.list
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:50 runtime_log
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc   1812480 Jan  9 08:50 result.tar.gz
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc      8817 Jan  9 08:50 runtime_log.err
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc       655 Jan  9 08:50 cblMDmDh7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmT0kKDmf0vIWo.diag
[2026-01-09 08:50:33] -rw-r--r--. 1 boinc boinc     20632 Jan  9 08:50 stderr.txt
[2026-01-09 08:50:33] HITS file was successfully produced:
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc 223844319 Jan  9 08:48 shared/HITS.pool.root.1
[2026-01-09 08:50:33]  *** Contents of shared directory: ***
[2026-01-09 08:50:33] total 441636
[2026-01-09 08:50:33] -rw-r--r--. 2 boinc boinc 225960839 Jan  9 05:58 ATLAS.root_0
[2026-01-09 08:50:33] -rw-r--r--. 2 boinc boinc     15847 Jan  9 05:58 start_atlas.sh
[2026-01-09 08:50:33] -rw-r--r--. 2 boinc boinc    592399 Jan  9 05:58 input.tar.gz
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc 223844319 Jan  9 08:48 HITS.pool.root.1
[2026-01-09 08:50:33] -rw-------. 1 boinc boinc   1812480 Jan  9 08:50 result.tar.gz
08:50:34 (1488): run_atlas exited; CPU time 76809.432518
08:50:34 (1488): called boinc_finish(0)

</stderr_txt>
]]>

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