Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:46:51 (3540808): wrapper (7.7.26015): starting
13:46:51 (3540808): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 13:46:51] Arguments: --nthreads 8
[2026-01-08 13:46:51] Threads: 8
[2026-01-08 13:46:51] Checking for CVMFS
[2026-01-08 13:46:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 13:46:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 13:46:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 13:46:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 13:46:52] 2.11.3.0 1904511 55803 184944 154920 3 194 45489754 45568001 11492 130560 0 236677071 99.738 178787197 20607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 13:46:52] CVMFS is ok
[2026-01-08 13:46:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 13:46:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 13:46:52] Further information can be found at the LHC@home message board.
[2026-01-08 13:46:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:46:52] Checking for apptainer binary...
[2026-01-08 13:46:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 13:46:52] Running /usr/bin/apptainer --version
[2026-01-08 13:46:52] apptainer version 1.4.1-1.el9
[2026-01-08 13:46:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:46:52] wns0020.triumf.lcg
[2026-01-08 13:46:52] apptainer works
[2026-01-08 13:46:52] Set ATHENA_PROC_NUMBER=8
[2026-01-08 13:46:52] Set ATHENA_CORE_NUMBER=8
[2026-01-08 13:46:52] Starting ATLAS job with PandaID=6963077038
[2026-01-08 13:46:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 13:53:36]  *** The last 200 lines of the pilot log: ***
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | wrong length of table data, x=[1767908892.0, 1767908953.0, 1767909014.0], y=[1242.0, 607621.0, 442604.0] (must be same and length>=4)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | ..............................
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . Timing measurements:
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . get job = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . initial setup = 3 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . payload setup = 17 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . stage-in = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . payload execution = 165 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . stage-out = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . log creation = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | ..............................
[2026-01-08 13:53:36] 2026-01-08 21:53:02,010 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 13:53:36] 2026-01-08 21:53:02,010 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963077038/pilotlog.txt
[2026-01-08 13:53:36] 2026-01-08 21:53:02,037 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 13:53:36] - Log from pilotlog.txt -
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963077038/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | INFO     | extracted standard info from prmon json
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | wrong length of table data, x=[1767908892.0, 1767908953.0, 1767909014.0], y=[1242.0, 607621.0, 442604.0] (must be same and length>=4)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | ..............................
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . Timing measurements:
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . get job = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . initial setup = 3 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . payload setup = 17 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . stage-in = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . payload execution = 165 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . stage-out = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . log creation = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | ..............................
[2026-01-08 13:53:36] 2026-01-08 21:53:02,010 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 13:53:36] 2026-01-08 21:53:02,010 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963077038/pilotlog.txt
[2026-01-08 13:53:36] 2026-01-08 21:53:02,037 | WARNING  | 
[2026-01-08 13:53:36] [begin log extracts]
[2026-01-08 13:53:36] - Log from pilotlog.txt -
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963077038/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | INFO     | extracted standard info from prmon json
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 13:53:36] 2026-01-08 21:53:02,007 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:53:36] 2026-01-08 21:53:02,008 | WARNING  | wrong length of table data, x=[1767908892.0, 1767908953.0, 1767909014.0], y=[1242.0, 607621.0, 442604.0] (must be same and length>=4)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | ..............................
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . Timing measurements:
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . get job = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . initial setup = 3 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . payload setup = 17 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . stage-in = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . payload execution = 165 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . stage-out = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | . log creation = 0 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,009 | INFO     | ..............................
[2026-01-08 13:53:36] 2026-01-08 21:53:02,010 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 13:53:36] 2026-01-08 21:53:02,010 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963077038/pilotlog.txt
[2026-01-08 13:53:36] [end log extracts]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,037 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,038 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 13:53:36] 2026-01-08 21:53:02,358 | INFO     | time since job start (342s) is within the limit (174528.0s)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,529 | INFO     | 
[2026-01-08 13:53:36] 2026-01-08 21:53:02,529 | INFO     | job summary report
[2026-01-08 13:53:36] 2026-01-08 21:53:02,529 | INFO     | --------------------------------------------------
[2026-01-08 13:53:36] 2026-01-08 21:53:02,529 | INFO     | PanDA job id: 6963077038
[2026-01-08 13:53:36] 2026-01-08 21:53:02,529 | INFO     | task id: 47947082
[2026-01-08 13:53:36] 2026-01-08 21:53:02,529 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 13:50:37,189 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | pilot state: failed 
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | transexitcode: 65
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | exeerrorcode: 65
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | exitcode: 65
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | cpuconsumptiontime: 47 s
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | nevents: 0
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | neventsw: 0
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | pid: 3551070
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | pgrp: 3551070
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | corecount: 8
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | event service: False
[2026-01-08 13:53:36] 2026-01-08 21:53:02,530 | INFO     | sizes: {0: 2284378, 1: 2284577, 10: 2284839, 12: 2284867, 186: 2310352, 188: 2314642, 191: 2314798, 323: 2314964}
[2026-01-08 13:53:36] 2026-01-08 21:53:02,531 | INFO     | --------------------------------------------------
[2026-01-08 13:53:36] 2026-01-08 21:53:02,531 | INFO     | 
[2026-01-08 13:53:36] 2026-01-08 21:53:02,531 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 13:53:36] 2026-01-08 21:53:02,732 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,732 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,732 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,732 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,733 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 13:53:36] 2026-01-08 21:53:02,734 | INFO     | job 6963077038 has completed (purged errors)
[2026-01-08 13:53:36] 2026-01-08 21:53:02,734 | INFO     | overall cleanup function is called
[2026-01-08 13:53:36] 2026-01-08 21:53:03,749 | INFO     | --- collectZombieJob: --- 10, [3551070]
[2026-01-08 13:53:36] 2026-01-08 21:53:03,749 | INFO     | zombie collector waiting for pid 3551070
[2026-01-08 13:53:36] 2026-01-08 21:53:03,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 13:53:36] 2026-01-08 21:53:03,749 | INFO     | collected zombie processes
[2026-01-08 13:53:36] 2026-01-08 21:53:03,749 | INFO     | will attempt to kill all subprocesses of pid=3551070
[2026-01-08 13:53:36] 2026-01-08 21:53:04,276 | INFO     | process IDs to be killed: [3551070] (in reverse order)
[2026-01-08 13:53:36] 2026-01-08 21:53:04,331 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 13:53:36] 2026-01-08 21:53:04,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 13:53:36] 2026-01-08 21:53:04,359 | INFO     | did not find any defunct processes belonging to 3551070
[2026-01-08 13:53:36] 2026-01-08 21:53:04,365 | INFO     | did not find any defunct processes belonging to 3551070
[2026-01-08 13:53:36] 2026-01-08 21:53:04,365 | INFO     | ready for new job
[2026-01-08 13:53:36] 2026-01-08 21:53:04,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 13:53:36] 2026-01-08 21:53:04,386 | INFO     | ***************************************
[2026-01-08 13:53:36] 2026-01-08 21:53:04,387 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 13:53:36] 2026-01-08 21:53:04,387 | INFO     | ***************************************
[2026-01-08 13:53:36] 2026-01-08 21:53:04,387 | INFO     | 
[2026-01-08 13:53:36] 2026-01-08 21:53:04,388 | INFO     | architecture information:
[2026-01-08 13:53:36] 2026-01-08 21:53:04,401 | INFO     | executing command: cat /etc/os-release
[2026-01-08 13:53:36] 2026-01-08 21:53:04,412 | INFO     | cat /etc/os-release:
[2026-01-08 13:53:36] NAME="CentOS Linux"
[2026-01-08 13:53:36] VERSION="7 (Core)"
[2026-01-08 13:53:36] ID="centos"
[2026-01-08 13:53:36] ID_LIKE="rhel fedora"
[2026-01-08 13:53:36] VERSION_ID="7"
[2026-01-08 13:53:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 13:53:36] ANSI_COLOR="0;31"
[2026-01-08 13:53:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 13:53:36] HOME_URL="https://www.centos.org/"
[2026-01-08 13:53:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 13:53:36] 
[2026-01-08 13:53:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 13:53:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 13:53:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 13:53:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 13:53:36] 
[2026-01-08 13:53:36] 2026-01-08 21:53:04,412 | INFO     | ***************************************
[2026-01-08 13:53:36] 2026-01-08 21:53:04,916 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 13:53:36] 2026-01-08 21:53:05,011 | INFO     | sufficient remaining disk space (1083390820352 B)
[2026-01-08 13:53:36] 2026-01-08 21:53:05,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 13:53:36] 2026-01-08 21:53:05,012 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 13:53:36] 2026-01-08 21:53:05,012 | INFO     | update_server=False
[2026-01-08 13:53:36] 2026-01-08 21:53:05,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 13:53:36] 2026-01-08 21:53:05,078 | INFO     | all job control threads have been joined
[2026-01-08 13:53:36] 2026-01-08 21:53:05,253 | INFO     | all data control threads have been joined
[2026-01-08 13:53:36] 2026-01-08 21:53:05,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:53:36] 2026-01-08 21:53:05,593 | INFO     | aborting loop
[2026-01-08 13:53:36] 2026-01-08 21:53:05,610 | INFO     | all payload control threads have been joined
[2026-01-08 13:53:36] 2026-01-08 21:53:05,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 13:53:36] 2026-01-08 21:53:06,018 | INFO     | [job] retrieve thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,065 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,084 | INFO     | [job] control thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,259 | INFO     | [data] control thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,322 | INFO     | [payload] failed_post thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,492 | INFO     | [payload] validate_post thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,561 | INFO     | [data] copytool_in thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,568 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,580 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,602 | INFO     | [job] job monitor thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,616 | INFO     | [payload] control thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:06,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 13:53:36] 2026-01-08 21:53:07,066 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:07,079 | INFO     | [job] validate thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:07,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:53:36] 2026-01-08 21:53:07,920 | INFO     | [data] copytool_out thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:08,148 | INFO     | [job] queue monitor thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:10,892 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 13:53:36] 2026-01-08 21:53:19,544 | INFO     | [monitor] cgroup control has ended
[2026-01-08 13:53:36] 2026-01-08 21:53:20,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750066095936)>', '<ExcThread(monitor, started 139749662627584)>']
[2026-01-08 13:53:36] 2026-01-08 21:53:25,965 | INFO     | all workflow threads have been joined
[2026-01-08 13:53:36] 2026-01-08 21:53:25,965 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 13:53:36] 2026-01-08 21:53:25,965 | INFO     | traces error code: 0
[2026-01-08 13:53:36] 2026-01-08 21:53:25,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 13:53:36] 2026-01-08 21:53:35,667 | INFO     | PID=3544487 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 13:53:36] 2026-01-08 21:53:35,667 | INFO     | .. there are 19 such processes running
[2026-01-08 13:53:36] 2026-01-08 21:53:35,668 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 13:53:36] 2026-01-08 21:53:35,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 13:53:36] 2026-01-08 21:53:35,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 13:53:36] 2026-01-08 21:53:35,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 13:53:36] 2026-01-08 21:53:35,668 | INFO     | [monitor] control thread has ended
[2026-01-08 13:53:36] 2026-01-08 21:53:35,752 [wrapper] ==== pilot stdout END ====
[2026-01-08 13:53:36] 2026-01-08 21:53:35,754 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 13:53:36] 2026-01-08 21:53:35,755 [wrapper] pilotpid: 3544487
[2026-01-08 13:53:36] 2026-01-08 21:53:35,757 [wrapper] Pilot exit status: 0
[2026-01-08 13:53:36] 2026-01-08 21:53:35,777 [wrapper] pandaids: 6963077038
[2026-01-08 13:53:36] 2026-01-08 21:53:35,808 [wrapper] cleanup supervisor_pilot 3544493 3544488
[2026-01-08 13:53:36] 2026-01-08 21:53:35,830 [wrapper] Test setup, not cleaning
[2026-01-08 13:53:36] 2026-01-08 21:53:35,849 [wrapper] apfmon messages muted
[2026-01-08 13:53:36] 2026-01-08 21:53:35,879 [wrapper] ==== wrapper stdout END ====
[2026-01-08 13:53:36] 2026-01-08 21:53:35,913 [wrapper] ==== wrapper stderr END ====
[2026-01-08 13:53:36]  *** Error codes and diagnostics ***
[2026-01-08 13:53:36]     "exeErrorCode": 65,
[2026-01-08 13:53:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-08 13:53:36]     "pilotErrorCode": 1305,
[2026-01-08 13:53:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-08 13:53:36]  *** Listing of results directory ***
[2026-01-08 13:53:36] total 408812
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc    579449 Jan  8 03:09 pilot3.tar.gz
[2026-01-08 13:53:36] -rwx------. 1 boinc boinc     36322 Jan  8 03:56 runpilot2-wrapper.sh
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc      5112 Jan  8 03:57 queuedata.json
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc       100 Jan  8 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 13:53:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 13:46 run_atlas
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc       105 Jan  8 13:46 job.xml
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc      6445 Jan  8 13:46 init_data.xml
[2026-01-08 13:53:36] -rw-r--r--. 2 boinc boinc 414398668 Jan  8 13:46 EVNT.47947080._000147.pool.root.1
[2026-01-08 13:53:36] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:46 start_atlas.sh
[2026-01-08 13:53:36] drwxrwx--x. 2 boinc boinc      4096 Jan  8 13:46 shared
[2026-01-08 13:53:36] -rw-r--r--. 2 boinc boinc    592612 Jan  8 13:46 input.tar.gz
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc         0 Jan  8 13:46 boinc_lockfile
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc      2877 Jan  8 13:46 pandaJob.out
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc    989845 Jan  8 13:47 agis_schedconf.cvmfs.json
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc   1516240 Jan  8 13:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 13:53:36] drwx------. 5 boinc boinc      4096 Jan  8 13:47 pilot3
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc       524 Jan  8 13:49 boinc_task_state.xml
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc       991 Jan  8 13:50 memory_monitor_summary.json
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc     49565 Jan  8 13:50 log.47947082._005297.job.log.tgz.1
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc     10333 Jan  8 13:53 heartbeat.json
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc      8192 Jan  8 13:53 boinc_mmap_file
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc        23 Jan  8 13:53 wrapper_checkpoint.txt
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc        95 Jan  8 13:53 pilot_heartbeat.json
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc       823 Jan  8 13:53 pilotlog.txt
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc    106525 Jan  8 13:53 log.47947082._005297.job.log.1
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc       186 Jan  8 13:53 output.list
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc       620 Jan  8 13:53 runtime_log
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc    174080 Jan  8 13:53 result.tar.gz
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc      8634 Jan  8 13:53 runtime_log.err
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc       647 Jan  8 13:53 PofLDmOo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHWkKDmIGrXHn.diag
[2026-01-08 13:53:36] -rw-r--r--. 1 boinc boinc     22451 Jan  8 13:53 stderr.txt
[2026-01-08 13:53:36] No HITS result produced
[2026-01-08 13:53:36]  *** Contents of shared directory: ***
[2026-01-08 13:53:36] total 405460
[2026-01-08 13:53:36] -rw-r--r--. 2 boinc boinc 414398668 Jan  8 13:46 ATLAS.root_0
[2026-01-08 13:53:36] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:46 start_atlas.sh
[2026-01-08 13:53:36] -rw-r--r--. 2 boinc boinc    592612 Jan  8 13:46 input.tar.gz
[2026-01-08 13:53:36] -rw-------. 1 boinc boinc    174080 Jan  8 13:53 result.tar.gz
13:53:37 (3540808): run_atlas exited; CPU time 51.157132
13:53:37 (3540808): called boinc_finish(0)

</stderr_txt>
]]>

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