Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:11:46 (1581356): wrapper (7.7.26015): starting
17:11:46 (1581356): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 17:11:46] Arguments: --nthreads 8
[2026-01-08 17:11:46] Threads: 8
[2026-01-08 17:11:46] Checking for CVMFS
[2026-01-08 17:11:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:11:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:11:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:11:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:11:48] 2.13.3.0 9734 20219 192476 154920 2 403 31497528 39288832 8697 16776704 0 9303190 99.261 15326101 36274 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 17:11:48] CVMFS is ok
[2026-01-08 17:11:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 17:11:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 17:11:48] Further information can be found at the LHC@home message board.
[2026-01-08 17:11:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:11:48] Checking for apptainer binary...
[2026-01-08 17:11:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:11:48] Running /usr/bin/apptainer --version
[2026-01-08 17:11:48] apptainer version 1.4.5-2.el9
[2026-01-08 17:11:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:11:49] c-210-4.aglt2.org
[2026-01-08 17:11:49] apptainer works
[2026-01-08 17:11:49] Set ATHENA_PROC_NUMBER=8
[2026-01-08 17:11:49] Set ATHENA_CORE_NUMBER=8
[2026-01-08 17:11:49] Starting ATLAS job with PandaID=6963152271
[2026-01-08 17:11:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:48:46]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:48:46] 2026-01-09 04:47:58,912 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.168199999999
[2026-01-08 23:48:46] 2026-01-09 04:47:58,926 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963152271/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:48:46] 2026-01-09 04:47:58,927 | INFO     | extracted standard info from prmon json
[2026-01-08 23:48:46] 2026-01-09 04:47:58,927 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:48:46] 2026-01-09 04:47:58,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:48:46] 2026-01-09 04:47:58,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:48:46] 2026-01-09 04:47:58,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:48:46] 2026-01-09 04:47:58,959 | INFO     | monitor loop #1548: job 0:6963152271 is in state 'finished'
[2026-01-08 23:48:46] 2026-01-09 04:47:58,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:48:46] 2026-01-09 04:47:58,961 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:48:46] 2026-01-09 04:47:58,962 | INFO     | sum of square deviations: 17833369882.976696
[2026-01-08 23:48:46] 2026-01-09 04:47:58,966 | INFO     | sum of deviations: 98835275330.60614
[2026-01-08 23:48:46] 2026-01-09 04:47:58,966 | INFO     | mean x: 1767922273.992228
[2026-01-08 23:48:46] 2026-01-09 04:47:58,966 | INFO     | mean y: 2531611.202072539
[2026-01-08 23:48:46] 2026-01-09 04:47:58,966 | INFO     | intersect: -9795565207.275806
[2026-01-08 23:48:46] 2026-01-09 04:47:58,967 | INFO     | chi2: 2.4636774395751675
[2026-01-08 23:48:46] 2026-01-09 04:47:58,968 | INFO     | sum of square deviations: 17149397463.244144
[2026-01-08 23:48:46] 2026-01-09 04:47:58,978 | INFO     | sum of deviations: 96237065238.14958
[2026-01-08 23:48:46] 2026-01-09 04:47:58,983 | INFO     | mean x: 1767922121.503937
[2026-01-08 23:48:46] 2026-01-09 04:47:58,983 | INFO     | mean y: 2531031.900262467
[2026-01-08 23:48:46] 2026-01-09 04:47:58,983 | INFO     | intersect: -9918496042.53766
[2026-01-08 23:48:46] 2026-01-09 04:47:58,984 | INFO     | chi2: 2.464324793310057
[2026-01-08 23:48:46] 2026-01-09 04:47:58,984 | INFO     | current chi2=2.464324793310057 (change=-0.026275912767269358 %)
[2026-01-08 23:48:46] 2026-01-09 04:47:58,984 | INFO     | right removable region: 380
[2026-01-08 23:48:46] 2026-01-09 04:47:58,985 | INFO     | sum of square deviations: 17149139675.217773
[2026-01-08 23:48:46] 2026-01-09 04:47:58,992 | INFO     | sum of deviations: 8643161147.052496
[2026-01-08 23:48:46] 2026-01-09 04:47:58,992 | INFO     | mean x: 1767922426.5091863
[2026-01-08 23:48:46] 2026-01-09 04:47:58,992 | INFO     | mean y: 2551648.556430446
[2026-01-08 23:48:46] 2026-01-09 04:47:58,993 | INFO     | intersect: -888480713.2528758
[2026-01-08 23:48:46] 2026-01-09 04:47:58,993 | INFO     | chi2: 0.1743699145549374
[2026-01-08 23:48:46] 2026-01-09 04:47:58,993 | INFO     | current chi2=0.1743699145549374 (change=92.92237239526754 %)
[2026-01-08 23:48:46] 2026-01-09 04:47:58,996 | INFO     | sum of square deviations: 16482630851.73406
[2026-01-08 23:48:46] 2026-01-09 04:47:59,000 | INFO     | sum of deviations: -11901795716.654253
[2026-01-08 23:48:46] 2026-01-09 04:47:59,005 | INFO     | mean x: 1767922579.0265958
[2026-01-08 23:48:46] 2026-01-09 04:47:59,005 | INFO     | mean y: 2556338.465425532
[2026-01-08 23:48:46] 2026-01-09 04:47:59,006 | INFO     | intersect: 1279139765.4504087
[2026-01-08 23:48:46] 2026-01-09 04:47:59,006 | INFO     | chi2: 0.06247096792659712
[2026-01-08 23:48:46] 2026-01-09 04:47:59,006 | INFO     | current chi2=0.06247096792659712 (change=64.17331046697574 %)
[2026-01-08 23:48:46] 2026-01-09 04:47:59,007 | INFO     | sum of square deviations: 15833702722.32884
[2026-01-08 23:48:46] 2026-01-09 04:47:59,011 | INFO     | sum of deviations: -9816002492.126684
[2026-01-08 23:48:46] 2026-01-09 04:47:59,011 | INFO     | mean x: 1767922731.5336928
[2026-01-08 23:48:46] 2026-01-09 04:47:59,011 | INFO     | mean y: 2555847.450134771
[2026-01-08 23:48:46] 2026-01-09 04:47:59,011 | INFO     | intersect: 1098568210.6322134
[2026-01-08 23:48:46] 2026-01-09 04:47:59,012 | INFO     | chi2: 0.06183835690357455
[2026-01-08 23:48:46] 2026-01-09 04:47:59,012 | INFO     | current chi2=0.06183835690357455 (change=1.0126480251848842 %)
[2026-01-08 23:48:46] 2026-01-09 04:47:59,012 | INFO     | left removable region: 30
[2026-01-08 23:48:46] 2026-01-09 04:47:59,013 | INFO     | sum of square deviations: 13294233453.074259
[2026-01-08 23:48:46] 2026-01-09 04:47:59,016 | INFO     | sum of deviations: 1790877228.1142912
[2026-01-08 23:48:46] 2026-01-09 04:47:59,016 | INFO     | mean x: 1767923006.0514286
[2026-01-08 23:48:46] 2026-01-09 04:47:59,016 | INFO     | mean y: 2552183.7714285715
[2026-01-08 23:48:46] 2026-01-09 04:47:59,016 | INFO     | intersect: -235606192.4728751
[2026-01-08 23:48:46] 2026-01-09 04:47:59,017 | INFO     | chi2: 0.04809187095795054
[2026-01-08 23:48:46] 2026-01-09 04:47:59,017 | INFO     | current memory leak: 0.13 B/s (using 350 data points, chi2=0.05)
[2026-01-08 23:48:46] 2026-01-09 04:47:59,018 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2026-01-08 23:48:46] 2026-01-09 04:47:59,018 | INFO     | ..............................
[2026-01-08 23:48:46] 2026-01-09 04:47:59,018 | INFO     | . Timing measurements:
[2026-01-08 23:48:46] 2026-01-09 04:47:59,018 | INFO     | . get job = 0 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,018 | INFO     | . initial setup = 7 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,019 | INFO     | . payload setup = 45 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,019 | INFO     | . stage-in = 0 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,019 | INFO     | . payload execution = 23560 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,019 | INFO     | . stage-out = 3 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,019 | INFO     | . log creation = 0 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,019 | INFO     | ..............................
[2026-01-08 23:48:46] 2026-01-09 04:47:59,673 | INFO     | 
[2026-01-08 23:48:46] 2026-01-09 04:47:59,673 | INFO     | job summary report
[2026-01-08 23:48:46] 2026-01-09 04:47:59,673 | INFO     | --------------------------------------------------
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | PanDA job id: 6963152271
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | task id: 47898826
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | errors: (none)
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | pilot state: finished 
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | transexitcode: 0
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | exeerrorcode: 0
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | exeerrordiag: 
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | exitcode: 0
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | exitmsg: OK
[2026-01-08 23:48:46] 2026-01-09 04:47:59,674 | INFO     | cpuconsumptiontime: 68680 s
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | nevents: 400
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | neventsw: 0
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | pid: 1595937
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | pgrp: 1595937
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | corecount: 8
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | event service: False
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | sizes: {0: 2283142, 1: 2283743, 2: 2283855, 3: 2283855, 4: 2284054, 5: 2284082, 16: 2284266, 28: 2284294, 34: 2284584, 39: 2284612, 23609: 2319655, 23610: 2319934,
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | --------------------------------------------------
[2026-01-08 23:48:46] 2026-01-09 04:47:59,675 | INFO     | 
[2026-01-08 23:48:46] 2026-01-09 04:47:59,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 23:48:46] 2026-01-09 04:47:59,885 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:48:46] 2026-01-09 04:47:59,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:48:46] 2026-01-09 04:47:59,888 | INFO     | job 6963152271 has completed (purged errors)
[2026-01-08 23:48:46] 2026-01-09 04:47:59,893 | INFO     | overall cleanup function is called
[2026-01-08 23:48:46] 2026-01-09 04:48:00,902 | INFO     | --- collectZombieJob: --- 10, [1595937]
[2026-01-08 23:48:46] 2026-01-09 04:48:00,902 | INFO     | zombie collector waiting for pid 1595937
[2026-01-08 23:48:46] 2026-01-09 04:48:00,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:48:46] 2026-01-09 04:48:00,903 | INFO     | collected zombie processes
[2026-01-08 23:48:46] 2026-01-09 04:48:00,903 | INFO     | will attempt to kill all subprocesses of pid=1595937
[2026-01-08 23:48:46] 2026-01-09 04:48:01,404 | INFO     | process IDs to be killed: [1595937] (in reverse order)
[2026-01-08 23:48:46] 2026-01-09 04:48:01,655 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:48:46] 2026-01-09 04:48:01,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:48:46] 2026-01-09 04:48:01,679 | INFO     | did not find any defunct processes belonging to 1595937
[2026-01-08 23:48:46] 2026-01-09 04:48:01,689 | INFO     | did not find any defunct processes belonging to 1595937
[2026-01-08 23:48:46] 2026-01-09 04:48:01,690 | INFO     | ready for new job
[2026-01-08 23:48:46] 2026-01-09 04:48:01,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:48:46] 2026-01-09 04:48:01,693 | INFO     | ***************************************
[2026-01-08 23:48:46] 2026-01-09 04:48:01,694 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:48:46] 2026-01-09 04:48:01,694 | INFO     | ***************************************
[2026-01-08 23:48:46] 2026-01-09 04:48:01,694 | INFO     | 
[2026-01-08 23:48:46] 2026-01-09 04:48:01,696 | INFO     | architecture information:
[2026-01-08 23:48:46] 2026-01-09 04:48:01,696 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:48:46] 2026-01-09 04:48:01,715 | INFO     | cat /etc/os-release:
[2026-01-08 23:48:46] NAME="CentOS Linux"
[2026-01-08 23:48:46] VERSION="7 (Core)"
[2026-01-08 23:48:46] ID="centos"
[2026-01-08 23:48:46] ID_LIKE="rhel fedora"
[2026-01-08 23:48:46] VERSION_ID="7"
[2026-01-08 23:48:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:48:46] ANSI_COLOR="0;31"
[2026-01-08 23:48:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:48:46] HOME_URL="https://www.centos.org/"
[2026-01-08 23:48:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:48:46] 
[2026-01-08 23:48:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:48:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:48:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:48:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:48:46] 
[2026-01-08 23:48:46] 2026-01-09 04:48:01,716 | INFO     | ***************************************
[2026-01-08 23:48:46] 2026-01-09 04:48:02,219 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 23:48:46] 2026-01-09 04:48:02,241 | INFO     | sufficient remaining disk space (53546582016 B)
[2026-01-08 23:48:46] 2026-01-09 04:48:02,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:48:46] 2026-01-09 04:48:02,241 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:48:46] 2026-01-09 04:48:02,241 | INFO     | update_server=False
[2026-01-08 23:48:46] 2026-01-09 04:48:02,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:48:46] 2026-01-09 04:48:02,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:48:46] 2026-01-09 04:48:02,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:48:46] 2026-01-09 04:48:02,497 | INFO     | aborting loop
[2026-01-08 23:48:46] 2026-01-09 04:48:02,562 | INFO     | all data control threads have been joined
[2026-01-08 23:48:46] 2026-01-09 04:48:02,700 | INFO     | all job control threads have been joined
[2026-01-08 23:48:46] 2026-01-09 04:48:03,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:48:46] 2026-01-09 04:48:03,182 | INFO     | all payload control threads have been joined
[2026-01-08 23:48:46] 2026-01-09 04:48:03,247 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,488 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,506 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,568 | INFO     | [data] control thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,583 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,603 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,706 | INFO     | [job] control thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,927 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:03,951 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:04,187 | INFO     | [payload] control thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:04,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:48:46] 2026-01-09 04:48:04,635 | INFO     | [job] validate thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:04,661 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:05,102 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:05,244 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:06,251 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:13,201 | INFO     | job.realtimelogging is not enabled
[2026-01-08 23:48:46] 2026-01-09 04:48:14,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:48:46] 2026-01-09 04:48:31,609 | INFO     | PID=1585568 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 23:48:46] 2026-01-09 04:48:31,609 | INFO     | .. there are 6 such processes running
[2026-01-08 23:48:46] 2026-01-09 04:48:31,610 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:48:46] 2026-01-09 04:48:31,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:48:46] 2026-01-09 04:48:31,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:48:46] 2026-01-09 04:48:39,071 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:48:46] 2026-01-09 04:48:39,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862517790528)>', '<ExcThread(monitor, started 139861977720576)>']
[2026-01-08 23:48:46] 2026-01-09 04:48:40,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:48:46] 2026-01-09 04:48:40,666 | INFO     | [monitor] control thread has ended
[2026-01-08 23:48:46] 2026-01-09 04:48:44,979 | INFO     | all workflow threads have been joined
[2026-01-08 23:48:46] 2026-01-09 04:48:44,979 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:48:46] 2026-01-09 04:48:44,980 | INFO     | traces error code: 0
[2026-01-08 23:48:46] 2026-01-09 04:48:44,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:48:46] 2026-01-09 04:48:45,326 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:48:46] 2026-01-09 04:48:45,356 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:48:46] 2026-01-09 04:48:45,382 [wrapper] pilotpid: 1585568
[2026-01-08 23:48:46] 2026-01-09 04:48:45,405 [wrapper] Pilot exit status: 0
[2026-01-08 23:48:46] 2026-01-09 04:48:45,532 [wrapper] pandaids: 6963152271
[2026-01-08 23:48:46] 2026-01-09 04:48:45,611 [wrapper] cleanup supervisor_pilot 2180719 1585569
[2026-01-08 23:48:46] 2026-01-09 04:48:45,614 [wrapper] Test setup, not cleaning
[2026-01-08 23:48:46] 2026-01-09 04:48:45,617 [wrapper] apfmon messages muted
[2026-01-08 23:48:46] 2026-01-09 04:48:45,624 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:48:46] 2026-01-09 04:48:45,642 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:48:46]  *** Error codes and diagnostics ***
[2026-01-08 23:48:46]     "exeErrorCode": 0,
[2026-01-08 23:48:46]     "exeErrorDiag": "",
[2026-01-08 23:48:46]     "pilotErrorCode": 0,
[2026-01-08 23:48:46]     "pilotErrorDiag": "",
[2026-01-08 23:48:46]  *** Listing of results directory ***
[2026-01-08 23:48:46] total 456048
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 11:02 pilot3.tar.gz
[2026-01-08 23:48:46] -rwx------. 1 boincer umatlas     36322 Jan  8 11:04 runpilot2-wrapper.sh
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 11:04 queuedata.json
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas       100 Jan  8 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:48:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 17:11 run_atlas
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas       105 Jan  8 17:11 job.xml
[2026-01-08 23:48:46] -rw-r--r--. 2 boincer umatlas 227018089 Jan  8 17:11 EVNT.47898824._001138.pool.root.1
[2026-01-08 23:48:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 17:11 start_atlas.sh
[2026-01-08 23:48:46] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 17:11 shared
[2026-01-08 23:48:46] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 17:11 input.tar.gz
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas         0 Jan  8 17:11 boinc_lockfile
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 17:11 pandaJob.out
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas        57 Jan  8 17:11 setup.sh.local
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas    989845 Jan  8 17:12 agis_schedconf.cvmfs.json
[2026-01-08 23:48:46] drwx------. 5 boincer umatlas      4096 Jan  8 17:12 pilot3
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas      6660 Jan  8 23:46 init_data.xml
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas       531 Jan  8 23:46 boinc_task_state.xml
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas 228665219 Jan  8 23:46 HITS.47898826._029072.pool.root.1
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas      1040 Jan  8 23:47 memory_monitor_summary.json
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas   1516240 Jan  8 23:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas    600390 Jan  8 23:47 log.47898826._029072.job.log.tgz.1
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas      7822 Jan  8 23:47 heartbeat.json
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas        95 Jan  8 23:48 pilot_heartbeat.json
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 23:48 boinc_mmap_file
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas        28 Jan  8 23:48 wrapper_checkpoint.txt
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas      4895 Jan  8 23:48 pilotlog.txt
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas   3096526 Jan  8 23:48 log.47898826._029072.job.log.1
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas       357 Jan  8 23:48 output.list
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas       620 Jan  8 23:48 runtime_log
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas   3717120 Jan  8 23:48 result.tar.gz
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas       656 Jan  8 23:48 uLLODmff7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwxkKDmtzrnPm.diag
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas      9338 Jan  8 23:48 runtime_log.err
[2026-01-08 23:48:46] -rw-r--r--. 1 boincer umatlas     20996 Jan  8 23:48 stderr.txt
[2026-01-08 23:48:46] HITS file was successfully produced:
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas 228665219 Jan  8 23:46 shared/HITS.pool.root.1
[2026-01-08 23:48:46]  *** Contents of shared directory: ***
[2026-01-08 23:48:46] total 449240
[2026-01-08 23:48:46] -rw-r--r--. 2 boincer umatlas 227018089 Jan  8 17:11 ATLAS.root_0
[2026-01-08 23:48:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 17:11 start_atlas.sh
[2026-01-08 23:48:46] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 17:11 input.tar.gz
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas 228665219 Jan  8 23:46 HITS.pool.root.1
[2026-01-08 23:48:46] -rw-------. 1 boincer umatlas   3717120 Jan  8 23:48 result.tar.gz
23:48:47 (1581356): run_atlas exited; CPU time 69167.030520
23:48:47 (1581356): called boinc_finish(0)

</stderr_txt>
]]>

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