Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:41 (3859827): wrapper (7.7.26015): starting
10:30:41 (3859827): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 10:30:41] Arguments: --nthreads 3
[2026-01-09 10:30:41] Threads: 3
[2026-01-09 10:30:41] Checking for CVMFS
[2026-01-09 10:30:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:30:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:30:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:30:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:30:41] 2.9.2.0 3347489 2079 81584 154938 2 56 15362830 36864000 0 130560 0 1308459 99.989 79570 4991 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 10:30:41] CVMFS is ok
[2026-01-09 10:30:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:30:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:30:41] Further information can be found at the LHC@home message board.
[2026-01-09 10:30:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:30:41] Checking for apptainer binary...
[2026-01-09 10:30:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:30:41] Running /usr/bin/apptainer --version
[2026-01-09 10:30:41] apptainer version 1.4.1-1.1
[2026-01-09 10:30:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:30:41] thA325a
[2026-01-09 10:30:41] apptainer works
[2026-01-09 10:30:41] Set ATHENA_PROC_NUMBER=3
[2026-01-09 10:30:41] Set ATHENA_CORE_NUMBER=3
[2026-01-09 10:30:41] Starting ATLAS job with PandaID=6963151778
[2026-01-09 10:30:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:29:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:29:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:29:01] 
[2026-01-09 12:29:01] 2026-01-09 11:27:55,821 | INFO     | ***************************************
[2026-01-09 12:29:01] 2026-01-09 11:27:56,324 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 12:29:01] 2026-01-09 11:27:56,336 | INFO     | sufficient remaining disk space (244625440768 B)
[2026-01-09 12:29:01] 2026-01-09 11:27:56,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:29:01] 2026-01-09 11:27:56,336 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:29:01] 2026-01-09 11:27:56,336 | INFO     | update_server=False
[2026-01-09 12:29:01] 2026-01-09 11:27:56,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:29:01] 2026-01-09 11:27:56,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:29:01] 2026-01-09 11:27:56,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:29:01] 2026-01-09 11:27:56,337 | INFO     | aborting loop
[2026-01-09 12:29:01] 2026-01-09 11:27:56,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:29:01] 2026-01-09 11:27:56,401 | INFO     | all payload control threads have been joined
[2026-01-09 12:29:01] 2026-01-09 11:27:56,546 | INFO     | all job control threads have been joined
[2026-01-09 12:29:01] 2026-01-09 11:27:56,834 | INFO     | all data control threads have been joined
[2026-01-09 12:29:01] 2026-01-09 11:27:57,340 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:57,341 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:57,341 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:57,407 | INFO     | [payload] control thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:57,539 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:57,551 | INFO     | [job] control thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:57,839 | INFO     | [data] control thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:58,222 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:58,370 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:58,382 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:58,686 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:58,727 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:58,730 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:58,755 | INFO     | [job] validate thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:27:59,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:29:01] 2026-01-09 11:28:03,627 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:28:07,343 | INFO     | job.realtimelogging is not enabled
[2026-01-09 12:29:01] 2026-01-09 11:28:08,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:29:01] 2026-01-09 11:28:27,146 | INFO     | PID=3863552 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:29:01] 2026-01-09 11:28:27,146 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:29:01] 2026-01-09 11:28:27,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:29:01] 2026-01-09 11:28:27,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:29:01] 2026-01-09 11:28:56,202 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:29:01] 2026-01-09 11:28:56,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736367433536)>', '<ExcThread(monitor, started 139735754340096)>']
[2026-01-09 12:29:01] 2026-01-09 11:28:57,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:29:01] 2026-01-09 11:28:57,302 | INFO     | [monitor] control thread has ended
[2026-01-09 12:29:01] 2026-01-09 11:29:01,480 | INFO     | all workflow threads have been joined
[2026-01-09 12:29:01] 2026-01-09 11:29:01,481 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:29:01] 2026-01-09 11:29:01,482 | INFO     | traces error code: 0
[2026-01-09 12:29:01] 2026-01-09 11:29:01,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:29:01] 2026-01-09 11:29:01,532 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:29:01] 2026-01-09 11:29:01,535 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:29:01] 2026-01-09 11:29:01,538 [wrapper] pilotpid: 3863552
[2026-01-09 12:29:01] 2026-01-09 11:29:01,540 [wrapper] Pilot exit status: 0
[2026-01-09 12:29:01] 2026-01-09 11:29:01,547 [wrapper] pandaids: 6963151778
[2026-01-09 12:29:01] 2026-01-09 11:29:01,565 [wrapper] cleanup supervisor_pilot 3889856 3863553
[2026-01-09 12:29:01] 2026-01-09 11:29:01,567 [wrapper] Test setup, not cleaning
[2026-01-09 12:29:01] 2026-01-09 11:29:01,570 [wrapper] apfmon messages muted
[2026-01-09 12:29:01] 2026-01-09 11:29:01,572 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:29:01] 2026-01-09 11:29:01,575 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:29:01]  *** Error codes and diagnostics ***
[2026-01-09 12:29:01]     "exeErrorCode": 0,
[2026-01-09 12:29:01]     "exeErrorDiag": "",
[2026-01-09 12:29:01]     "pilotErrorCode": 0,
[2026-01-09 12:29:01]     "pilotErrorDiag": "",
[2026-01-09 12:29:01]  *** Listing of results directory ***
[2026-01-09 12:29:01] total 435448
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 12:29:01] -rwx------ 1 boinc boinc     36322 Jan  8 17:03 runpilot2-wrapper.sh
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:04 queuedata.json
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc       100 Jan  9 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:29:01] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 10:30 run_atlas
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc       105 Jan  9 10:30 job.xml
[2026-01-09 12:29:01] -rw-r--r-- 2 boinc boinc 225454622 Jan  9 10:30 EVNT.47898824._001125.pool.root.1
[2026-01-09 12:29:01] -rw-r--r-- 2 boinc boinc    592395 Jan  9 10:30 input.tar.gz
[2026-01-09 12:29:01] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:30 start_atlas.sh
[2026-01-09 12:29:01] drwxrwx--x 2 boinc boinc      4096 Jan  9 10:30 shared
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:30 boinc_setup_complete
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc      6440 Jan  9 10:30 init_data.xml
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:30 boinc_lockfile
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc      2519 Jan  9 10:30 pandaJob.out
[2026-01-09 12:29:01] -rw------- 1 boinc boinc    989751 Jan  9 10:30 agis_schedconf.cvmfs.json
[2026-01-09 12:29:01] -rw------- 1 boinc boinc   1516240 Jan  9 10:30 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:29:01] drwx------ 5 boinc boinc      4096 Jan  9 10:30 pilot3
[2026-01-09 12:29:01] -rw------- 1 boinc boinc 213977369 Jan  9 12:27 HITS.47898826._028729.pool.root.1
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc       529 Jan  9 12:27 boinc_task_state.xml
[2026-01-09 12:29:01] -rw------- 1 boinc boinc      1030 Jan  9 12:27 memory_monitor_summary.json
[2026-01-09 12:29:01] -rw------- 1 boinc boinc    275606 Jan  9 12:27 log.47898826._028729.job.log.tgz.1
[2026-01-09 12:29:01] -rw------- 1 boinc boinc      7763 Jan  9 12:27 heartbeat.json
[2026-01-09 12:29:01] -rw------- 1 boinc boinc        95 Jan  9 12:28 pilot_heartbeat.json
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc      8192 Jan  9 12:28 boinc_mmap_file
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc        27 Jan  9 12:28 wrapper_checkpoint.txt
[2026-01-09 12:29:01] -rw------- 1 boinc boinc      4824 Jan  9 12:29 pilotlog.txt
[2026-01-09 12:29:01] -rw------- 1 boinc boinc   1010351 Jan  9 12:29 log.47898826._028729.job.log.1
[2026-01-09 12:29:01] -rw------- 1 boinc boinc       357 Jan  9 12:29 output.list
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc       620 Jan  9 12:29 runtime_log
[2026-01-09 12:29:01] -rw------- 1 boinc boinc   1300480 Jan  9 12:29 result.tar.gz
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc      8902 Jan  9 12:29 runtime_log.err
[2026-01-09 12:29:01] -rw------- 1 boinc boinc       660 Jan  9 12:29 VhWKDmTf7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBwkKDmzQd4gn.diag
[2026-01-09 12:29:01] -rw-r--r-- 1 boinc boinc      8136 Jan  9 12:29 stderr.txt
[2026-01-09 12:29:01] HITS file was successfully produced:
[2026-01-09 12:29:01] -rw------- 1 boinc boinc 213977369 Jan  9 12:27 shared/HITS.pool.root.1
[2026-01-09 12:29:01]  *** Contents of shared directory: ***
[2026-01-09 12:29:01] total 431012
[2026-01-09 12:29:01] -rw-r--r-- 2 boinc boinc 225454622 Jan  9 10:30 ATLAS.root_0
[2026-01-09 12:29:01] -rw-r--r-- 2 boinc boinc    592395 Jan  9 10:30 input.tar.gz
[2026-01-09 12:29:01] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:30 start_atlas.sh
[2026-01-09 12:29:01] -rw------- 1 boinc boinc 213977369 Jan  9 12:27 HITS.pool.root.1
[2026-01-09 12:29:01] -rw------- 1 boinc boinc   1300480 Jan  9 12:29 result.tar.gz
12:29:02 (3859827): run_atlas exited; CPU time 20276.598693
12:29:02 (3859827): called boinc_finish(0)

</stderr_txt>
]]>

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