Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:14:03 (3086541): wrapper (7.7.26015): starting
13:14:03 (3086541): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 13:14:03] Arguments: --nthreads 8
[2026-01-08 13:14:03] Threads: 8
[2026-01-08 13:14:03] Checking for CVMFS
[2026-01-08 13:14:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 13:14:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 13:14:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 13:14:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 13:14:04] 2.11.3.0 3753445 55738 127804 154920 3 9 34998080 45568001 12887 130560 0 244567100 99.750 189743572 20384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-08 13:14:04] CVMFS is ok
[2026-01-08 13:14:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 13:14:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 13:14:04] Further information can be found at the LHC@home message board.
[2026-01-08 13:14:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:14:04] Checking for apptainer binary...
[2026-01-08 13:14:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 13:14:04] Running /usr/bin/apptainer --version
[2026-01-08 13:14:04] apptainer version 1.4.1-1.el9
[2026-01-08 13:14:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:14:04] wns0010.triumf.lcg
[2026-01-08 13:14:04] apptainer works
[2026-01-08 13:14:04] Set ATHENA_PROC_NUMBER=8
[2026-01-08 13:14:04] Set ATHENA_CORE_NUMBER=8
[2026-01-08 13:14:04] Starting ATLAS job with PandaID=6963148317
[2026-01-08 13:14:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 13:22:46]  *** The last 200 lines of the pilot log: ***
[2026-01-08 13:22:46] 2026-01-08 21:21:35,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:22:46] 2026-01-08 21:21:35,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 13:22:46] 2026-01-08 21:21:35,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | WARNING  | wrong length of table data, x=[1767907024.0, 1767907085.0, 1767907146.0], y=[969.0, 221789.0, 469298.0] (must be same and length>=4)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | ..............................
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | . Timing measurements:
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | . get job = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . initial setup = 6 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . payload setup = 28 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . stage-in = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . payload execution = 170 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . stage-out = 2 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . log creation = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | ..............................
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963148317/pilotlog.txt
[2026-01-08 13:22:46] 2026-01-08 21:21:35,278 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 13:22:46] - Log from pilotlog.txt -
[2026-01-08 13:22:46] 2026-01-08 21:21:35,147 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963148317/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,155 | INFO     | extracted standard info from prmon json
[2026-01-08 13:22:46] 2026-01-08 21:21:35,155 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 13:22:46] 2026-01-08 21:21:35,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:22:46] 2026-01-08 21:21:35,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 13:22:46] 2026-01-08 21:21:35,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | WARNING  | wrong length of table data, x=[1767907024.0, 1767907085.0, 1767907146.0], y=[969.0, 221789.0, 469298.0] (must be same and length>=4)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | ..............................
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | . Timing measurements:
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | . get job = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . initial setup = 6 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . payload setup = 28 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . stage-in = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . payload execution = 170 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . stage-out = 2 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . log creation = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | ..............................
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963148317/pilotlog.txt
[2026-01-08 13:22:46] 2026-01-08 21:21:35,279 | WARNING  | 
[2026-01-08 13:22:46] [begin log extracts]
[2026-01-08 13:22:46] - Log from pilotlog.txt -
[2026-01-08 13:22:46] 2026-01-08 21:21:35,147 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963148317/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,155 | INFO     | extracted standard info from prmon json
[2026-01-08 13:22:46] 2026-01-08 21:21:35,155 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 13:22:46] 2026-01-08 21:21:35,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:22:46] 2026-01-08 21:21:35,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 13:22:46] 2026-01-08 21:21:35,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | WARNING  | wrong length of table data, x=[1767907024.0, 1767907085.0, 1767907146.0], y=[969.0, 221789.0, 469298.0] (must be same and length>=4)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | ..............................
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | . Timing measurements:
[2026-01-08 13:22:46] 2026-01-08 21:21:35,157 | INFO     | . get job = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . initial setup = 6 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . payload setup = 28 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . stage-in = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . payload execution = 170 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . stage-out = 2 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | . log creation = 0 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | ..............................
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 13:22:46] 2026-01-08 21:21:35,158 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963148317/pilotlog.txt
[2026-01-08 13:22:46] [end log extracts]
[2026-01-08 13:22:46] 2026-01-08 21:21:35,279 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,279 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 13:22:46] 2026-01-08 21:21:35,471 | INFO     | 
[2026-01-08 13:22:46] 2026-01-08 21:21:35,472 | INFO     | job summary report
[2026-01-08 13:22:46] 2026-01-08 21:21:35,472 | INFO     | --------------------------------------------------
[2026-01-08 13:22:46] 2026-01-08 21:21:35,472 | INFO     | PanDA job id: 6963148317
[2026-01-08 13:22:46] 2026-01-08 21:21:35,472 | INFO     | task id: 47898826
[2026-01-08 13:22:46] 2026-01-08 21:21:35,472 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 13:19:00,344 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | pilot state: failed 
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | transexitcode: 65
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | exeerrorcode: 65
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | exitcode: 65
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | cpuconsumptiontime: 20 s
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | nevents: 0
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | neventsw: 0
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | pid: 3097083
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | pgrp: 3097083
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | corecount: 8
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | event service: False
[2026-01-08 13:22:46] 2026-01-08 21:21:35,473 | INFO     | sizes: {0: 2283796, 1: 2283995, 12: 2283995, 24: 2284023, 26: 2284313, 35: 2284341, 204: 2307714, 207: 2312006, 210: 2312062, 345: 2312228}
[2026-01-08 13:22:46] 2026-01-08 21:21:35,474 | INFO     | --------------------------------------------------
[2026-01-08 13:22:46] 2026-01-08 21:21:35,474 | INFO     | 
[2026-01-08 13:22:46] 2026-01-08 21:21:35,474 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 13:22:46] 2026-01-08 21:21:36,003 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,003 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 13:22:46] 2026-01-08 21:21:36,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 13:22:46] 2026-01-08 21:21:36,005 | INFO     | job 6963148317 has completed (purged errors)
[2026-01-08 13:22:46] 2026-01-08 21:21:36,005 | INFO     | overall cleanup function is called
[2026-01-08 13:22:46] 2026-01-08 21:21:37,012 | INFO     | --- collectZombieJob: --- 10, [3097083]
[2026-01-08 13:22:46] 2026-01-08 21:21:37,012 | INFO     | zombie collector waiting for pid 3097083
[2026-01-08 13:22:46] 2026-01-08 21:21:37,012 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 13:22:46] 2026-01-08 21:21:37,012 | INFO     | collected zombie processes
[2026-01-08 13:22:46] 2026-01-08 21:21:37,012 | INFO     | will attempt to kill all subprocesses of pid=3097083
[2026-01-08 13:22:46] 2026-01-08 21:21:38,730 | INFO     | process IDs to be killed: [3097083] (in reverse order)
[2026-01-08 13:22:46] 2026-01-08 21:21:39,160 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 13:22:46] 2026-01-08 21:21:39,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 13:22:46] 2026-01-08 21:21:39,178 | INFO     | did not find any defunct processes belonging to 3097083
[2026-01-08 13:22:46] 2026-01-08 21:21:39,195 | INFO     | did not find any defunct processes belonging to 3097083
[2026-01-08 13:22:46] 2026-01-08 21:21:39,195 | INFO     | ready for new job
[2026-01-08 13:22:46] 2026-01-08 21:21:39,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 13:22:46] 2026-01-08 21:21:39,197 | INFO     | ***************************************
[2026-01-08 13:22:46] 2026-01-08 21:21:39,197 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 13:22:46] 2026-01-08 21:21:39,197 | INFO     | ***************************************
[2026-01-08 13:22:46] 2026-01-08 21:21:39,197 | INFO     | 
[2026-01-08 13:22:46] 2026-01-08 21:21:39,199 | INFO     | architecture information:
[2026-01-08 13:22:46] 2026-01-08 21:21:39,223 | INFO     | executing command: cat /etc/os-release
[2026-01-08 13:22:46] 2026-01-08 21:21:39,353 | INFO     | cat /etc/os-release:
[2026-01-08 13:22:46] NAME="CentOS Linux"
[2026-01-08 13:22:46] VERSION="7 (Core)"
[2026-01-08 13:22:46] ID="centos"
[2026-01-08 13:22:46] ID_LIKE="rhel fedora"
[2026-01-08 13:22:46] VERSION_ID="7"
[2026-01-08 13:22:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 13:22:46] ANSI_COLOR="0;31"
[2026-01-08 13:22:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 13:22:46] HOME_URL="https://www.centos.org/"
[2026-01-08 13:22:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 13:22:46] 
[2026-01-08 13:22:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 13:22:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 13:22:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 13:22:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 13:22:46] 
[2026-01-08 13:22:46] 2026-01-08 21:21:39,354 | INFO     | ***************************************
[2026-01-08 13:22:46] 2026-01-08 21:21:39,874 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 13:22:46] 2026-01-08 21:21:40,054 | INFO     | sufficient remaining disk space (1242886569984 B)
[2026-01-08 13:22:46] 2026-01-08 21:21:40,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 13:22:46] 2026-01-08 21:21:40,054 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 13:22:46] 2026-01-08 21:21:40,054 | INFO     | update_server=False
[2026-01-08 13:22:46] 2026-01-08 21:21:40,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 13:22:46] 2026-01-08 21:21:40,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:22:46] 2026-01-08 21:21:40,055 | INFO     | aborting loop
[2026-01-08 13:22:46] 2026-01-08 21:21:40,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:22:46] 2026-01-08 21:21:40,819 | INFO     | all data control threads have been joined
[2026-01-08 13:22:46] 2026-01-08 21:21:41,063 | INFO     | [job] retrieve thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,064 | INFO     | [job] job monitor thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 13:22:46] 2026-01-08 21:21:41,274 | INFO     | all payload control threads have been joined
[2026-01-08 13:22:46] 2026-01-08 21:21:41,319 | INFO     | [payload] validate_post thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 13:22:46] 2026-01-08 21:21:41,597 | INFO     | [job] queue monitor thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,599 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,604 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,606 | INFO     | [data] copytool_in thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,682 | INFO     | [payload] failed_post thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:41,769 | INFO     | all job control threads have been joined
[2026-01-08 13:22:46] 2026-01-08 21:21:41,825 | INFO     | [data] control thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:42,101 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:42,280 | INFO     | [payload] control thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:42,521 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:42,524 | INFO     | [job] validate thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:42,775 | INFO     | [job] control thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:43,241 | INFO     | [data] copytool_out thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:21:45,432 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 13:22:46] 2026-01-08 21:22:10,024 | INFO     | PID=3090234 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 13:22:46] 2026-01-08 21:22:10,024 | INFO     | .. there are 26 such processes running
[2026-01-08 13:22:46] 2026-01-08 21:22:10,024 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 13:22:46] 2026-01-08 21:22:10,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 13:22:46] 2026-01-08 21:22:10,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 13:22:46] 2026-01-08 21:22:36,781 | INFO     | [monitor] cgroup control has ended
[2026-01-08 13:22:46] 2026-01-08 21:22:38,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127128627008)>', '<ExcThread(monitor, started 140126808151808)>']
[2026-01-08 13:22:46] 2026-01-08 21:22:39,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 13:22:46] 2026-01-08 21:22:39,210 | INFO     | [monitor] control thread has ended
[2026-01-08 13:22:46] 2026-01-08 21:22:43,836 | INFO     | all workflow threads have been joined
[2026-01-08 13:22:46] 2026-01-08 21:22:43,836 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 13:22:46] 2026-01-08 21:22:43,837 | INFO     | traces error code: 0
[2026-01-08 13:22:46] 2026-01-08 21:22:43,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 13:22:46] 2026-01-08 21:22:44,641 [wrapper] ==== pilot stdout END ====
[2026-01-08 13:22:46] 2026-01-08 21:22:44,677 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 13:22:46] 2026-01-08 21:22:44,722 [wrapper] pilotpid: 3090234
[2026-01-08 13:22:46] 2026-01-08 21:22:44,750 [wrapper] Pilot exit status: 0
[2026-01-08 13:22:46] 2026-01-08 21:22:45,029 [wrapper] pandaids: 6963148317
[2026-01-08 13:22:46] 2026-01-08 21:22:45,203 [wrapper] cleanup supervisor_pilot 3090240 3090235
[2026-01-08 13:22:46] 2026-01-08 21:22:45,235 [wrapper] Test setup, not cleaning
[2026-01-08 13:22:46] 2026-01-08 21:22:45,268 [wrapper] apfmon messages muted
[2026-01-08 13:22:46] 2026-01-08 21:22:45,315 [wrapper] ==== wrapper stdout END ====
[2026-01-08 13:22:46] 2026-01-08 21:22:45,363 [wrapper] ==== wrapper stderr END ====
[2026-01-08 13:22:46]  *** Error codes and diagnostics ***
[2026-01-08 13:22:46]     "exeErrorCode": 65,
[2026-01-08 13:22:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 13:22:46]     "pilotErrorCode": 1305,
[2026-01-08 13:22:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 13:22:46]  *** Listing of results directory ***
[2026-01-08 13:22:46] total 225672
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc      5112 Jan  8 08:02 queuedata.json
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:02 pilot3.tar.gz
[2026-01-08 13:22:46] -rwx------. 1 boinc boinc     36322 Jan  8 08:03 runpilot2-wrapper.sh
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc       100 Jan  8 13:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 13:22:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 13:14 run_atlas
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc       105 Jan  8 13:14 job.xml
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc      6445 Jan  8 13:14 init_data.xml
[2026-01-08 13:22:46] -rw-r--r--. 2 boinc boinc 226909659 Jan  8 13:14 EVNT.47898824._001104.pool.root.1
[2026-01-08 13:22:46] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:14 start_atlas.sh
[2026-01-08 13:22:46] drwxrwx--x. 2 boinc boinc      4096 Jan  8 13:14 shared
[2026-01-08 13:22:46] -rw-r--r--. 2 boinc boinc    592398 Jan  8 13:14 input.tar.gz
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc         0 Jan  8 13:14 boinc_lockfile
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc      2519 Jan  8 13:14 pandaJob.out
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc    989845 Jan  8 13:14 agis_schedconf.cvmfs.json
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc   1516240 Jan  8 13:14 agis_ddmendpoints.agis.ALL.json
[2026-01-08 13:22:46] drwx------. 5 boinc boinc      4096 Jan  8 13:14 pilot3
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc       525 Jan  8 13:18 boinc_task_state.xml
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc       990 Jan  8 13:19 memory_monitor_summary.json
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc     23060 Jan  8 13:19 log.47898826._027988.job.log.tgz.1
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc        95 Jan  8 13:21 pilot_heartbeat.json
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc      8408 Jan  8 13:21 heartbeat.json
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc      8192 Jan  8 13:22 boinc_mmap_file
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc        23 Jan  8 13:22 wrapper_checkpoint.txt
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc      4823 Jan  8 13:22 pilotlog.txt
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc    107575 Jan  8 13:22 log.47898826._027988.job.log.1
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc       188 Jan  8 13:22 output.list
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc       620 Jan  8 13:22 runtime_log
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc    153600 Jan  8 13:22 result.tar.gz
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc      8634 Jan  8 13:22 runtime_log.err
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc       647 Jan  8 13:22 2oQKDm4e7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNtkKDmHkLibm.diag
[2026-01-08 13:22:46] -rw-r--r--. 1 boinc boinc     21959 Jan  8 13:22 stderr.txt
[2026-01-08 13:22:46] No HITS result produced
[2026-01-08 13:22:46]  *** Contents of shared directory: ***
[2026-01-08 13:22:46] total 222344
[2026-01-08 13:22:46] -rw-r--r--. 2 boinc boinc 226909659 Jan  8 13:14 ATLAS.root_0
[2026-01-08 13:22:46] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:14 start_atlas.sh
[2026-01-08 13:22:46] -rw-r--r--. 2 boinc boinc    592398 Jan  8 13:14 input.tar.gz
[2026-01-08 13:22:46] -rw-------. 1 boinc boinc    153600 Jan  8 13:22 result.tar.gz
13:22:48 (3086541): run_atlas exited; CPU time 35.531396
13:22:48 (3086541): called boinc_finish(0)

</stderr_txt>
]]>

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