Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:56:12 (15707): wrapper (7.7.26015): starting
21:56:12 (15707): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 21:56:12] Arguments: --nthreads 8
[2026-01-08 21:56:12] Threads: 8
[2026-01-08 21:56:12] Checking for CVMFS
[2026-01-08 21:56:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 21:56:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 21:56:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 21:56:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 21:56:17] 2.11.2.0 11583 34484 96816 154919 3 11 23886061 25165824 96 130560 0 14861199 99.833 9927535 3736 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 21:56:17] CVMFS is ok
[2026-01-08 21:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 21:56:17] Checking for apptainer binary...
[2026-01-08 21:56:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 21:56:17] Running /usr/bin/apptainer --version
[2026-01-08 21:56:17] apptainer version 1.3.2-1.el7
[2026-01-08 21:56:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 21:56:24] cg-vwn428.simple-grid.lan
[2026-01-08 21:56:24] apptainer works
[2026-01-08 21:56:24] Set ATHENA_PROC_NUMBER=8
[2026-01-08 21:56:24] Set ATHENA_CORE_NUMBER=8
[2026-01-08 21:56:25] Starting ATLAS job with PandaID=6963151484
[2026-01-08 21:56:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:55:44]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:55:44] 2026-01-09 02:55:11,364 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963151484/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,365 | INFO     | extracted standard info from prmon json
[2026-01-09 03:55:44] 2026-01-09 02:55:11,365 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:55:44] 2026-01-09 02:55:11,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:55:44] 2026-01-09 02:55:11,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:55:44] 2026-01-09 02:55:11,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:55:44] 2026-01-09 02:55:11,373 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:55:44] 2026-01-09 02:55:11,374 | INFO     | sum of square deviations: 12187409905.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,378 | INFO     | sum of deviations: 144424877797.5
[2026-01-09 03:55:44] 2026-01-09 02:55:11,378 | INFO     | mean x: 1767916946.5
[2026-01-09 03:55:44] 2026-01-09 02:55:11,378 | INFO     | mean y: 2460012.655882353
[2026-01-09 03:55:44] 2026-01-09 02:55:11,378 | INFO     | intersect: -20947946262.72834
[2026-01-09 03:55:44] 2026-01-09 02:55:11,379 | INFO     | chi2: 7.793318428958835
[2026-01-09 03:55:44] 2026-01-09 02:55:11,380 | INFO     | sum of square deviations: 11657595320.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,384 | INFO     | sum of deviations: 164847847469.00012
[2026-01-09 03:55:44] 2026-01-09 02:55:11,384 | INFO     | mean x: 1767916794.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,384 | INFO     | mean y: 2465813.850746269
[2026-01-09 03:55:44] 2026-01-09 02:55:11,384 | INFO     | intersect: -24997310726.273285
[2026-01-09 03:55:44] 2026-01-09 02:55:11,385 | INFO     | chi2: 7.074241220810911
[2026-01-09 03:55:44] 2026-01-09 02:55:11,385 | INFO     | current chi2=7.074241220810911 (change=9.226842386882822 %)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,385 | INFO     | right removable region: 334
[2026-01-09 03:55:44] 2026-01-09 02:55:11,386 | INFO     | sum of square deviations: 11657595320.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,389 | INFO     | sum of deviations: 29562816069.00019
[2026-01-09 03:55:44] 2026-01-09 02:55:11,390 | INFO     | mean x: 1767917099.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,390 | INFO     | mean y: 2493052.056716418
[2026-01-09 03:55:44] 2026-01-09 02:55:11,390 | INFO     | intersect: -4480816463.183637
[2026-01-09 03:55:44] 2026-01-09 02:55:11,391 | INFO     | chi2: 3.30392967644373
[2026-01-09 03:55:44] 2026-01-09 02:55:11,391 | INFO     | current chi2=3.30392967644373 (change=57.60561169723529 %)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,391 | INFO     | sum of square deviations: 11143362422.5
[2026-01-09 03:55:44] 2026-01-09 02:55:11,395 | INFO     | sum of deviations: -52725087883.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,395 | INFO     | mean x: 1767917251.5
[2026-01-09 03:55:44] 2026-01-09 02:55:11,396 | INFO     | mean y: 2517412.3393939394
[2026-01-09 03:55:44] 2026-01-09 02:55:11,396 | INFO     | intersect: 8367460498.727582
[2026-01-09 03:55:44] 2026-01-09 02:55:11,396 | INFO     | chi2: 1.015817368575896
[2026-01-09 03:55:44] 2026-01-09 02:55:11,396 | INFO     | current chi2=1.015817368575896 (change=69.25426785508047 %)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,397 | INFO     | sum of square deviations: 10644478650.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,401 | INFO     | sum of deviations: -68879015163.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,401 | INFO     | mean x: 1767917404.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,401 | INFO     | mean y: 2522332.369230769
[2026-01-09 03:55:44] 2026-01-09 02:55:11,401 | INFO     | intersect: 11442482304.203793
[2026-01-09 03:55:44] 2026-01-09 02:55:11,402 | INFO     | chi2: 0.8946448708487538
[2026-01-09 03:55:44] 2026-01-09 02:55:11,402 | INFO     | current chi2=0.8946448708487538 (change=11.92857116599783 %)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,402 | INFO     | left removable region: 30
[2026-01-09 03:55:44] 2026-01-09 02:55:11,403 | INFO     | sum of square deviations: 8711530780.0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,406 | INFO     | sum of deviations: -34766669979.5
[2026-01-09 03:55:44] 2026-01-09 02:55:11,406 | INFO     | mean x: 1767917678.5
[2026-01-09 03:55:44] 2026-01-09 02:55:11,407 | INFO     | mean y: 2525533.0690789474
[2026-01-09 03:55:44] 2026-01-09 02:55:11,407 | INFO     | intersect: 7058072030.183479
[2026-01-09 03:55:44] 2026-01-09 02:55:11,407 | INFO     | chi2: 0.09702050256541393
[2026-01-09 03:55:44] 2026-01-09 02:55:11,408 | INFO     | current memory leak: -3.99 B/s (using 304 data points, chi2=0.10)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,408 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | ..............................
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . Timing measurements:
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . get job = 0 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . initial setup = 14 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . payload setup = 157 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . stage-in = 0 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . payload execution = 20876 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . stage-out = 1 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,409 | INFO     | . log creation = 0 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,410 | INFO     | ..............................
[2026-01-09 03:55:44] 2026-01-09 02:55:11,987 | INFO     | 
[2026-01-09 03:55:44] 2026-01-09 02:55:11,987 | INFO     | job summary report
[2026-01-09 03:55:44] 2026-01-09 02:55:11,987 | INFO     | --------------------------------------------------
[2026-01-09 03:55:44] 2026-01-09 02:55:11,987 | INFO     | PanDA job id: 6963151484
[2026-01-09 03:55:44] 2026-01-09 02:55:11,987 | INFO     | task id: 47898826
[2026-01-09 03:55:44] 2026-01-09 02:55:11,987 | INFO     | errors: (none)
[2026-01-09 03:55:44] 2026-01-09 02:55:11,987 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | pilot state: finished 
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | transexitcode: 0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | exeerrorcode: 0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | exeerrordiag: 
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | exitcode: 0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | exitmsg: OK
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | cpuconsumptiontime: 80504 s
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | nevents: 400
[2026-01-09 03:55:44] 2026-01-09 02:55:11,988 | INFO     | neventsw: 0
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | pid: 26240
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | pgrp: 26240
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | corecount: 8
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | event service: False
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 33: 2284054, 44: 2284110, 55: 2284266, 66: 2284294, 76: 2284322, 87: 2284378, 98: 2284406, 108: 2284714, 
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | --------------------------------------------------
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | 
[2026-01-09 03:55:44] 2026-01-09 02:55:11,989 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 03:55:44] 2026-01-09 02:55:12,014 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,014 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,016 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:55:44] 2026-01-09 02:55:12,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:55:44] 2026-01-09 02:55:12,017 | INFO     | job 6963151484 has completed (purged errors)
[2026-01-09 03:55:44] 2026-01-09 02:55:12,017 | INFO     | overall cleanup function is called
[2026-01-09 03:55:44] 2026-01-09 02:55:13,026 | INFO     | --- collectZombieJob: --- 10, [26240]
[2026-01-09 03:55:44] 2026-01-09 02:55:13,026 | INFO     | zombie collector waiting for pid 26240
[2026-01-09 03:55:44] 2026-01-09 02:55:13,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:55:44] 2026-01-09 02:55:13,027 | INFO     | collected zombie processes
[2026-01-09 03:55:44] 2026-01-09 02:55:13,027 | INFO     | will attempt to kill all subprocesses of pid=26240
[2026-01-09 03:55:44] 2026-01-09 02:55:13,103 | INFO     | process IDs to be killed: [26240] (in reverse order)
[2026-01-09 03:55:44] 2026-01-09 02:55:13,150 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:55:44] 2026-01-09 02:55:13,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:55:44] 2026-01-09 02:55:13,153 | INFO     | did not find any defunct processes belonging to 26240
[2026-01-09 03:55:44] 2026-01-09 02:55:13,155 | INFO     | did not find any defunct processes belonging to 26240
[2026-01-09 03:55:44] 2026-01-09 02:55:13,155 | INFO     | ready for new job
[2026-01-09 03:55:44] 2026-01-09 02:55:13,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:55:44] 2026-01-09 02:55:13,158 | INFO     | ***************************************
[2026-01-09 03:55:44] 2026-01-09 02:55:13,158 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:55:44] 2026-01-09 02:55:13,158 | INFO     | ***************************************
[2026-01-09 03:55:44] 2026-01-09 02:55:13,158 | INFO     | 
[2026-01-09 03:55:44] 2026-01-09 02:55:13,159 | INFO     | pilot is running in a VM
[2026-01-09 03:55:44] 2026-01-09 02:55:13,159 | INFO     | architecture information:
[2026-01-09 03:55:44] 2026-01-09 02:55:13,159 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:55:44] 2026-01-09 02:55:13,177 | INFO     | cat /etc/os-release:
[2026-01-09 03:55:44] NAME="CentOS Linux"
[2026-01-09 03:55:44] VERSION="7 (Core)"
[2026-01-09 03:55:44] ID="centos"
[2026-01-09 03:55:44] ID_LIKE="rhel fedora"
[2026-01-09 03:55:44] VERSION_ID="7"
[2026-01-09 03:55:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:55:44] ANSI_COLOR="0;31"
[2026-01-09 03:55:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:55:44] HOME_URL="https://www.centos.org/"
[2026-01-09 03:55:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:55:44] 
[2026-01-09 03:55:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:55:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:55:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:55:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:55:44] 
[2026-01-09 03:55:44] 2026-01-09 02:55:13,177 | INFO     | ***************************************
[2026-01-09 03:55:44] 2026-01-09 02:55:13,680 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 03:55:44] 2026-01-09 02:55:13,699 | INFO     | sufficient remaining disk space (497735958528 B)
[2026-01-09 03:55:44] 2026-01-09 02:55:13,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:55:44] 2026-01-09 02:55:13,700 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:55:44] 2026-01-09 02:55:13,700 | INFO     | update_server=False
[2026-01-09 03:55:44] 2026-01-09 02:55:13,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:55:44] 2026-01-09 02:55:14,110 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 03:55:44] 2026-01-09 02:55:14,110 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 03:55:44] 2026-01-09 02:55:14,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:55:44] 2026-01-09 02:55:14,112 | INFO     | will abort loop
[2026-01-09 03:55:44] 2026-01-09 02:55:14,228 | INFO     | all data control threads have been joined
[2026-01-09 03:55:44] 2026-01-09 02:55:14,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:55:44] 2026-01-09 02:55:14,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:55:44] 2026-01-09 02:55:14,706 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:14,716 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:14,772 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:15,025 | INFO     | all job control threads have been joined
[2026-01-09 03:55:44] 2026-01-09 02:55:15,117 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:15,140 | INFO     | all payload control threads have been joined
[2026-01-09 03:55:44] 2026-01-09 02:55:15,185 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:15,234 | INFO     | [data] control thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:15,569 | INFO     | [job] validate thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:15,645 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:15,991 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:16,030 | INFO     | [job] control thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:16,145 | INFO     | [payload] control thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:16,189 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:16,429 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:16,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:55:44] 2026-01-09 02:55:16,991 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:55:44] 2026-01-09 02:55:17,549 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:18,540 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:23,961 | INFO     | job.realtimelogging is not enabled
[2026-01-09 03:55:44] 2026-01-09 02:55:24,962 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:55:44] 2026-01-09 02:55:25,021 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524552853312)>', '<ExcThread(monitor, started 140524124096256)>']
[2026-01-09 03:55:44] 2026-01-09 02:55:30,047 | INFO     | all workflow threads have been joined
[2026-01-09 03:55:44] 2026-01-09 02:55:30,047 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:55:44] 2026-01-09 02:55:30,047 | INFO     | traces error code: 0
[2026-01-09 03:55:44] 2026-01-09 02:55:30,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:55:44] 2026-01-09 02:55:44,463 | INFO     | PID=19739 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 03:55:44] 2026-01-09 02:55:44,463 | INFO     | .. there are 2 such processes running
[2026-01-09 03:55:44] 2026-01-09 02:55:44,464 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:55:44] 2026-01-09 02:55:44,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:55:44] 2026-01-09 02:55:44,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:55:44] 2026-01-09 02:55:44,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:55:44] 2026-01-09 02:55:44,465 | INFO     | [monitor] control thread has ended
[2026-01-09 03:55:44] 2026-01-09 02:55:44,609 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:55:44] 2026-01-09 02:55:44,621 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:55:44] 2026-01-09 02:55:44,626 [wrapper] pilotpid: 19739
[2026-01-09 03:55:44] 2026-01-09 02:55:44,630 [wrapper] Pilot exit status: 0
[2026-01-09 03:55:44] 2026-01-09 02:55:44,658 [wrapper] pandaids: 6963151484
[2026-01-09 03:55:44] 2026-01-09 02:55:44,694 [wrapper] cleanup supervisor_pilot 25405 19740
[2026-01-09 03:55:44] 2026-01-09 02:55:44,700 [wrapper] Test setup, not cleaning
[2026-01-09 03:55:44] 2026-01-09 02:55:44,706 [wrapper] apfmon messages muted
[2026-01-09 03:55:44] 2026-01-09 02:55:44,711 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:55:44] 2026-01-09 02:55:44,716 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:55:44]  *** Error codes and diagnostics ***
[2026-01-09 03:55:44]     "exeErrorCode": 0,
[2026-01-09 03:55:44]     "exeErrorDiag": "",
[2026-01-09 03:55:44]     "pilotErrorCode": 0,
[2026-01-09 03:55:44]     "pilotErrorDiag": "",
[2026-01-09 03:55:44]  *** Listing of results directory ***
[2026-01-09 03:55:44] total 442864
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 03:55:44] -rwx------. 1 boinc boinc     36322 Jan  8 17:03 runpilot2-wrapper.sh
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc       100 Jan  8 21:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:55:44] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 21:56 run_atlas
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc       105 Jan  8 21:56 job.xml
[2026-01-09 03:55:44] -rw-r--r--. 2 boinc boinc 223885205 Jan  8 21:56 EVNT.47898824._001092.pool.root.1
[2026-01-09 03:55:44] -rw-r--r--. 2 boinc boinc    592398 Jan  8 21:56 input.tar.gz
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc      6390 Jan  8 21:56 init_data.xml
[2026-01-09 03:55:44] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:56 start_atlas.sh
[2026-01-09 03:55:44] drwxrwx--x. 2 boinc boinc        68 Jan  8 21:56 shared
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc         0 Jan  8 21:56 boinc_lockfile
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc      2519 Jan  8 21:56 pandaJob.out
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc    989845 Jan  8 22:00 agis_schedconf.cvmfs.json
[2026-01-09 03:55:44] drwx------. 5 boinc boinc      4096 Jan  8 22:00 pilot3
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc 218924549 Jan  9 03:54 HITS.47898826._028522.pool.root.1
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc       531 Jan  9 03:54 boinc_task_state.xml
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc      1022 Jan  9 03:54 memory_monitor_summary.json
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc   1516240 Jan  9 03:55 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc    562516 Jan  9 03:55 log.47898826._028522.job.log.tgz.1
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc      7787 Jan  9 03:55 heartbeat.json
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc      8192 Jan  9 03:55 boinc_mmap_file
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc        28 Jan  9 03:55 wrapper_checkpoint.txt
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc        95 Jan  9 03:55 pilot_heartbeat.json
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc       820 Jan  9 03:55 pilotlog.txt
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc   2830099 Jan  9 03:55 log.47898826._028522.job.log.1
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc       357 Jan  9 03:55 output.list
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc       620 Jan  9 03:55 runtime_log
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc   3409920 Jan  9 03:55 result.tar.gz
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc      8817 Jan  9 03:55 runtime_log.err
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc       657 Jan  9 03:55 mjbNDmGf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmChfKDm5gya9m.diag
[2026-01-09 03:55:44] -rw-r--r--. 1 boinc boinc     20745 Jan  9 03:55 stderr.txt
[2026-01-09 03:55:44] HITS file was successfully produced:
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc 218924549 Jan  9 03:54 shared/HITS.pool.root.1
[2026-01-09 03:55:44]  *** Contents of shared directory: ***
[2026-01-09 03:55:44] total 436364
[2026-01-09 03:55:44] -rw-r--r--. 2 boinc boinc 223885205 Jan  8 21:56 ATLAS.root_0
[2026-01-09 03:55:44] -rw-r--r--. 2 boinc boinc    592398 Jan  8 21:56 input.tar.gz
[2026-01-09 03:55:44] -rw-r--r--. 2 boinc boinc     15847 Jan  8 21:56 start_atlas.sh
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc 218924549 Jan  9 03:54 HITS.pool.root.1
[2026-01-09 03:55:44] -rw-------. 1 boinc boinc   3409920 Jan  9 03:55 result.tar.gz
03:55:46 (15707): run_atlas exited; CPU time 80722.912936
03:55:46 (15707): called boinc_finish(0)

</stderr_txt>
]]>

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