Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:20 (3098174): wrapper (7.7.26015): starting
01:28:20 (3098174): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 01:28:20] Arguments: --nthreads 4
[2026-01-11 01:28:20] Threads: 4
[2026-01-11 01:28:20] Checking for CVMFS
[2026-01-11 01:28:20] No cvmfs_config command found, will try listing directly
[2026-01-11 01:28:20] CVMFS is ok
[2026-01-11 01:28:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 01:28:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 01:28:20] Further information can be found at the LHC@home message board.
[2026-01-11 01:28:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 01:28:20] Checking for apptainer binary...
[2026-01-11 01:28:20] which: no apptainer in ((null))
[2026-01-11 01:28:20] apptainer is not installed, using version from CVMFS
[2026-01-11 01:28:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 01:28:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-11 01:28:21] apptainer works
[2026-01-11 01:28:21] Set ATHENA_PROC_NUMBER=4
[2026-01-11 01:28:21] Set ATHENA_CORE_NUMBER=4
[2026-01-11 01:28:21] Starting ATLAS job with PandaID=6963148937
[2026-01-11 01:28:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 05:17:04]  *** The last 200 lines of the pilot log: ***
[2026-01-11 05:17:04] 2026-01-11 04:16:10,651 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2726.7354687499997
[2026-01-11 05:17:04] 2026-01-11 04:16:10,674 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6963148937/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,675 | INFO     | extracted standard info from prmon json
[2026-01-11 05:17:04] 2026-01-11 04:16:10,675 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 05:17:04] 2026-01-11 04:16:10,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 05:17:04] 2026-01-11 04:16:10,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 05:17:04] 2026-01-11 04:16:10,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 05:17:04] 2026-01-11 04:16:10,679 | INFO     | fitting pss+swap vs Time
[2026-01-11 05:17:04] 2026-01-11 04:16:10,679 | INFO     | sum of square deviations: 3485088600.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,681 | INFO     | sum of deviations: -33355978764.000008
[2026-01-11 05:17:04] 2026-01-11 04:16:10,681 | INFO     | mean x: 1768098151.5
[2026-01-11 05:17:04] 2026-01-11 04:16:10,681 | INFO     | mean y: 2344042.3660714286
[2026-01-11 05:17:04] 2026-01-11 04:16:10,681 | INFO     | intersect: 16924910772.549538
[2026-01-11 05:17:04] 2026-01-11 04:16:10,681 | INFO     | chi2: 2.019345545198246
[2026-01-11 05:17:04] 2026-01-11 04:16:10,682 | INFO     | sum of square deviations: 3256879670.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,683 | INFO     | sum of deviations: -19640700456.000008
[2026-01-11 05:17:04] 2026-01-11 04:16:10,683 | INFO     | mean x: 1768097999.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,683 | INFO     | mean y: 2353053.4657534244
[2026-01-11 05:17:04] 2026-01-11 04:16:10,683 | INFO     | intersect: 10664915596.100925
[2026-01-11 05:17:04] 2026-01-11 04:16:10,683 | INFO     | chi2: 1.360368292429138
[2026-01-11 05:17:04] 2026-01-11 04:16:10,684 | INFO     | current chi2=1.360368292429138 (change=32.633209028344574 %)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,684 | INFO     | sum of square deviations: 3038856977.5
[2026-01-11 05:17:04] 2026-01-11 04:16:10,685 | INFO     | sum of deviations: -18932440527.499996
[2026-01-11 05:17:04] 2026-01-11 04:16:10,685 | INFO     | mean x: 1768097846.5
[2026-01-11 05:17:04] 2026-01-11 04:16:10,685 | INFO     | mean y: 2353548.976635514
[2026-01-11 05:17:04] 2026-01-11 04:16:10,685 | INFO     | intersect: 11017813497.736946
[2026-01-11 05:17:04] 2026-01-11 04:16:10,686 | INFO     | chi2: 1.3591268622264967
[2026-01-11 05:17:04] 2026-01-11 04:16:10,686 | INFO     | current chi2=1.3591268622264967 (change=0.09125691987605647 %)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,686 | INFO     | right removable region: 213
[2026-01-11 05:17:04] 2026-01-11 04:16:10,686 | INFO     | sum of square deviations: 3256879670.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,687 | INFO     | sum of deviations: -55901310912.99987
[2026-01-11 05:17:04] 2026-01-11 04:16:10,687 | INFO     | mean x: 1768098304.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,688 | INFO     | mean y: 2358885.5570776258
[2026-01-11 05:17:04] 2026-01-11 04:16:10,688 | INFO     | intersect: 30350122091.881424
[2026-01-11 05:17:04] 2026-01-11 04:16:10,688 | INFO     | chi2: 0.8492639537321353
[2026-01-11 05:17:04] 2026-01-11 04:16:10,688 | INFO     | current chi2=0.8492639537321353 (change=57.943604265670146 %)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,688 | INFO     | sum of square deviations: 3038856977.5
[2026-01-11 05:17:04] 2026-01-11 04:16:10,689 | INFO     | sum of deviations: -51853320535.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,690 | INFO     | mean x: 1768098456.5
[2026-01-11 05:17:04] 2026-01-11 04:16:10,690 | INFO     | mean y: 2356051.785046729
[2026-01-11 05:17:04] 2026-01-11 04:16:10,690 | INFO     | intersect: 30172178679.55406
[2026-01-11 05:17:04] 2026-01-11 04:16:10,690 | INFO     | chi2: 0.8489161631315361
[2026-01-11 05:17:04] 2026-01-11 04:16:10,690 | INFO     | current chi2=0.8489161631315361 (change=0.04095200309289142 %)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,690 | INFO     | left removable region: 20
[2026-01-11 05:17:04] 2026-01-11 04:16:10,690 | INFO     | sum of square deviations: 2229146912.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,691 | INFO     | sum of deviations: -28428022271.999996
[2026-01-11 05:17:04] 2026-01-11 04:16:10,691 | INFO     | mean x: 1768098426.0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,692 | INFO     | mean y: 2359553.2176165804
[2026-01-11 05:17:04] 2026-01-11 04:16:10,692 | INFO     | intersect: 22550690110.90144
[2026-01-11 05:17:04] 2026-01-11 04:16:10,692 | INFO     | chi2: 0.16549733796727492
[2026-01-11 05:17:04] 2026-01-11 04:16:10,692 | INFO     | current memory leak: -12.75 B/s (using 193 data points, chi2=0.17)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,692 | INFO     | could have reported an average CPU frequency of 2692 MHz (11 samples)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,692 | INFO     | ..............................
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . Timing measurements:
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . get job = 0 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . initial setup = 1 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . payload setup = 8 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . stage-in = 0 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . payload execution = 13617 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . stage-out = 1 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | . log creation = 0 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,693 | INFO     | ..............................
[2026-01-11 05:17:04] 2026-01-11 04:16:10,770 | INFO     | 
[2026-01-11 05:17:04] 2026-01-11 04:16:10,771 | INFO     | job summary report
[2026-01-11 05:17:04] 2026-01-11 04:16:10,771 | INFO     | --------------------------------------------------
[2026-01-11 05:17:04] 2026-01-11 04:16:10,771 | INFO     | PanDA job id: 6963148937
[2026-01-11 05:17:04] 2026-01-11 04:16:10,771 | INFO     | task id: 47898826
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | errors: (none)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | pilot state: finished 
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | transexitcode: 0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | exeerrorcode: 0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | exeerrordiag: 
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | exitcode: 0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | exitmsg: OK
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | cpuconsumptiontime: 52464 s
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | nevents: 400
[2026-01-11 05:17:04] 2026-01-11 04:16:10,772 | INFO     | neventsw: 0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | pid: 3109587
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | pgrp: 3109587
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | corecount: 4
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | event service: False
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | sizes: {0: 2283812, 1: 2284011, 7: 2284273, 11: 2284301, 13626: 2315272, 13628: 2324478, 13637: 2324616}
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | --------------------------------------------------
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | 
[2026-01-11 05:17:04] 2026-01-11 04:16:10,773 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2026-01-11 05:17:04] 2026-01-11 04:16:10,809 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,809 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,811 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 05:17:04] 2026-01-11 04:16:10,812 | INFO     | job 6963148937 has completed (purged errors)
[2026-01-11 05:17:04] 2026-01-11 04:16:10,812 | INFO     | overall cleanup function is called
[2026-01-11 05:17:04] 2026-01-11 04:16:11,764 | INFO     | PID=3102168 has CPU usage=22.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 05:17:04] 2026-01-11 04:16:11,764 | INFO     | .. there are 10 such processes running
[2026-01-11 05:17:04] 2026-01-11 04:16:11,822 | INFO     | --- collectZombieJob: --- 10, [3109587]
[2026-01-11 05:17:04] 2026-01-11 04:16:11,822 | INFO     | zombie collector waiting for pid 3109587
[2026-01-11 05:17:04] 2026-01-11 04:16:11,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 05:17:04] 2026-01-11 04:16:11,823 | INFO     | collected zombie processes
[2026-01-11 05:17:04] 2026-01-11 04:16:11,823 | INFO     | will attempt to kill all subprocesses of pid=3109587
[2026-01-11 05:17:04] 2026-01-11 04:16:12,623 | INFO     | process IDs to be killed: [3109587] (in reverse order)
[2026-01-11 05:17:04] 2026-01-11 04:16:12,875 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 05:17:04] 2026-01-11 04:16:12,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 05:17:04] 2026-01-11 04:16:12,909 | INFO     | did not find any defunct processes belonging to 3109587
[2026-01-11 05:17:04] 2026-01-11 04:16:12,939 | INFO     | did not find any defunct processes belonging to 3109587
[2026-01-11 05:17:04] 2026-01-11 04:16:12,939 | INFO     | ready for new job
[2026-01-11 05:17:04] 2026-01-11 04:16:12,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 05:17:04] 2026-01-11 04:16:12,942 | INFO     | ***************************************
[2026-01-11 05:17:04] 2026-01-11 04:16:12,942 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 05:17:04] 2026-01-11 04:16:12,942 | INFO     | ***************************************
[2026-01-11 05:17:04] 2026-01-11 04:16:12,942 | INFO     | 
[2026-01-11 05:17:04] 2026-01-11 04:16:12,951 | INFO     | architecture information:
[2026-01-11 05:17:04] 2026-01-11 04:16:12,951 | INFO     | executing command: cat /etc/os-release
[2026-01-11 05:17:04] 2026-01-11 04:16:12,971 | INFO     | cat /etc/os-release:
[2026-01-11 05:17:04] NAME="CentOS Linux"
[2026-01-11 05:17:04] VERSION="7 (Core)"
[2026-01-11 05:17:04] ID="centos"
[2026-01-11 05:17:04] ID_LIKE="rhel fedora"
[2026-01-11 05:17:04] VERSION_ID="7"
[2026-01-11 05:17:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 05:17:04] ANSI_COLOR="0;31"
[2026-01-11 05:17:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 05:17:04] HOME_URL="https://www.centos.org/"
[2026-01-11 05:17:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 05:17:04] 
[2026-01-11 05:17:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 05:17:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 05:17:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 05:17:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 05:17:04] 
[2026-01-11 05:17:04] 2026-01-11 04:16:12,972 | INFO     | ***************************************
[2026-01-11 05:17:04] 2026-01-11 04:16:13,475 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2026-01-11 05:17:04] 2026-01-11 04:16:13,500 | INFO     | sufficient remaining disk space (3342504820736 B)
[2026-01-11 05:17:04] 2026-01-11 04:16:13,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 05:17:04] 2026-01-11 04:16:13,501 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 05:17:04] 2026-01-11 04:16:13,501 | INFO     | update_server=False
[2026-01-11 05:17:04] 2026-01-11 04:16:13,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 05:17:04] 2026-01-11 04:16:13,537 | INFO     | all payload control threads have been joined
[2026-01-11 05:17:04] 2026-01-11 04:16:13,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:17:04] 2026-01-11 04:16:13,845 | INFO     | aborting loop
[2026-01-11 05:17:04] 2026-01-11 04:16:14,186 | INFO     | all job control threads have been joined
[2026-01-11 05:17:04] 2026-01-11 04:16:14,286 | INFO     | all data control threads have been joined
[2026-01-11 05:17:04] 2026-01-11 04:16:14,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 05:17:04] 2026-01-11 04:16:14,506 | INFO     | [job] retrieve thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:14,542 | INFO     | [payload] control thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:14,740 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:14,850 | INFO     | [job] job monitor thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,055 | INFO     | [payload] failed_post thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,192 | INFO     | [job] control thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,274 | INFO     | [data] copytool_in thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,292 | INFO     | [data] control thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,397 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,418 | INFO     | [job] validate thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,594 | INFO     | [payload] validate_post thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:15,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:17:04] 2026-01-11 04:16:15,904 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:16,397 | INFO     | [data] copytool_out thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:16,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 05:17:04] 2026-01-11 04:16:16,786 | INFO     | [job] queue monitor thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:20,475 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:24,422 | INFO     | job.realtimelogging is not enabled
[2026-01-11 05:17:04] 2026-01-11 04:16:25,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 05:17:04] 2026-01-11 04:16:44,767 | INFO     | PID=3102168 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 05:17:04] 2026-01-11 04:16:44,767 | INFO     | .. there are 10 such processes running
[2026-01-11 05:17:04] 2026-01-11 04:16:44,768 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 05:17:04] 2026-01-11 04:16:44,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 05:17:04] 2026-01-11 04:16:44,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 05:17:04] 2026-01-11 04:16:57,524 | INFO     | [monitor] cgroup control has ended
[2026-01-11 05:17:04] 2026-01-11 04:16:59,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22815110739776)>', '<ExcThread(monitor, started 22814390208256)>']
[2026-01-11 05:17:04] 2026-01-11 04:16:59,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 05:17:04] 2026-01-11 04:16:59,842 | INFO     | [monitor] control thread has ended
[2026-01-11 05:17:04] 2026-01-11 04:17:04,321 | INFO     | all workflow threads have been joined
[2026-01-11 05:17:04] 2026-01-11 04:17:04,321 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 05:17:04] 2026-01-11 04:17:04,322 | INFO     | traces error code: 0
[2026-01-11 05:17:04] 2026-01-11 04:17:04,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 05:17:04] 2026-01-11 04:17:04,513 [wrapper] ==== pilot stdout END ====
[2026-01-11 05:17:04] 2026-01-11 04:17:04,518 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 05:17:04] 2026-01-11 04:17:04,521 [wrapper] pilotpid: 3102168
[2026-01-11 05:17:04] 2026-01-11 04:17:04,525 [wrapper] Pilot exit status: 0
[2026-01-11 05:17:04] 2026-01-11 04:17:04,540 [wrapper] pandaids: 6963148937
[2026-01-11 05:17:04] 2026-01-11 04:17:04,709 [wrapper] cleanup supervisor_pilot 3607779 3102169
[2026-01-11 05:17:04] 2026-01-11 04:17:04,713 [wrapper] Test setup, not cleaning
[2026-01-11 05:17:04] 2026-01-11 04:17:04,717 [wrapper] apfmon messages muted
[2026-01-11 05:17:04] 2026-01-11 04:17:04,721 [wrapper] ==== wrapper stdout END ====
[2026-01-11 05:17:04] 2026-01-11 04:17:04,725 [wrapper] ==== wrapper stderr END ====
[2026-01-11 05:17:04]  *** Error codes and diagnostics ***
[2026-01-11 05:17:04]     "exeErrorCode": 0,
[2026-01-11 05:17:04]     "exeErrorDiag": "",
[2026-01-11 05:17:04]     "pilotErrorCode": 0,
[2026-01-11 05:17:04]     "pilotErrorDiag": "",
[2026-01-11 05:17:04]  *** Listing of results directory ***
[2026-01-11 05:17:04] total 447512
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-11 05:17:04] -rwx------ 1 boinc boinc     36322 Jan  8 17:02 runpilot2-wrapper.sh
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc       100 Jan 11 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 05:17:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 01:28 run_atlas
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc       105 Jan 11 01:28 job.xml
[2026-01-11 05:17:04] -rw-r--r-- 2 boinc boinc 226573733 Jan 11 01:28 EVNT.47898824._001116.pool.root.1
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc      6692 Jan 11 01:28 init_data.xml
[2026-01-11 05:17:04] drwxrwx--x 2 boinc boinc      4096 Jan 11 01:28 shared
[2026-01-11 05:17:04] -rw-r--r-- 2 boinc boinc    592394 Jan 11 01:28 input.tar.gz
[2026-01-11 05:17:04] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:28 start_atlas.sh
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc         0 Jan 11 01:28 boinc_lockfile
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc      2520 Jan 11 01:28 pandaJob.out
[2026-01-11 05:17:04] -rw------- 1 boinc boinc    989540 Jan 11 01:28 agis_schedconf.cvmfs.json
[2026-01-11 05:17:04] drwx------ 5 boinc boinc      4096 Jan 11 01:28 pilot3
[2026-01-11 05:17:04] -rw------- 1 boinc boinc 223194801 Jan 11 05:15 HITS.47898826._028285.pool.root.1
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc       528 Jan 11 05:15 boinc_task_state.xml
[2026-01-11 05:17:04] -rw------- 1 boinc boinc      1030 Jan 11 05:15 memory_monitor_summary.json
[2026-01-11 05:17:04] -rw------- 1 boinc boinc   1516240 Jan 11 05:16 agis_ddmendpoints.agis.ALL.json
[2026-01-11 05:17:04] -rw------- 1 boinc boinc    396849 Jan 11 05:16 log.47898826._028285.job.log.tgz.1
[2026-01-11 05:17:04] -rw------- 1 boinc boinc        95 Jan 11 05:16 pilot_heartbeat.json
[2026-01-11 05:17:04] -rw------- 1 boinc boinc      7791 Jan 11 05:16 heartbeat.json
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc      8192 Jan 11 05:17 boinc_mmap_file
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc        26 Jan 11 05:17 wrapper_checkpoint.txt
[2026-01-11 05:17:04] -rw------- 1 boinc boinc      4908 Jan 11 05:17 pilotlog.txt
[2026-01-11 05:17:04] -rw------- 1 boinc boinc   1892274 Jan 11 05:17 log.47898826._028285.job.log.1
[2026-01-11 05:17:04] -rw------- 1 boinc boinc       357 Jan 11 05:17 output.list
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc       620 Jan 11 05:17 runtime_log
[2026-01-11 05:17:04] -rw------- 1 boinc boinc   2304000 Jan 11 05:17 result.tar.gz
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc      9223 Jan 11 05:17 runtime_log.err
[2026-01-11 05:17:04] -rw------- 1 boinc boinc       667 Jan 11 05:17 dwpLDm5d7x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQrkKDmLcwOqn.diag
[2026-01-11 05:17:04] -rw-r--r-- 1 boinc boinc     20974 Jan 11 05:17 stderr.txt
[2026-01-11 05:17:04] HITS file was successfully produced:
[2026-01-11 05:17:04] -rw------- 1 boinc boinc 223194801 Jan 11 05:15 shared/HITS.pool.root.1
[2026-01-11 05:17:04]  *** Contents of shared directory: ***
[2026-01-11 05:17:04] total 442084
[2026-01-11 05:17:04] -rw-r--r-- 2 boinc boinc 226573733 Jan 11 01:28 ATLAS.root_0
[2026-01-11 05:17:04] -rw-r--r-- 2 boinc boinc    592394 Jan 11 01:28 input.tar.gz
[2026-01-11 05:17:04] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:28 start_atlas.sh
[2026-01-11 05:17:04] -rw------- 1 boinc boinc 223194801 Jan 11 05:15 HITS.pool.root.1
[2026-01-11 05:17:04] -rw------- 1 boinc boinc   2304000 Jan 11 05:17 result.tar.gz
05:17:06 (3098174): run_atlas exited; CPU time 53409.964497
05:17:06 (3098174): called boinc_finish(0)

</stderr_txt>
]]>

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