Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:20 (11174): wrapper (7.7.26015): starting
04:44:20 (11174): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 04:44:20] Arguments: --nthreads 8
[2026-01-09 04:44:20] Threads: 8
[2026-01-09 04:44:20] Checking for CVMFS
[2026-01-09 04:44:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:44:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:44:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:44:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:44:23] 2.11.2.0 22482 34874 96832 154929 0 100 20507892 25165825 1088 130560 0 15320286 99.830 9745348 3887 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 04:44:23] CVMFS is ok
[2026-01-09 04:44:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:44:23] Checking for apptainer binary...
[2026-01-09 04:44:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:44:23] Running /usr/bin/apptainer --version
[2026-01-09 04:44:24] apptainer version 1.3.2-1.el7
[2026-01-09 04:44:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:44:29] cg-vwn445.simple-grid.lan
[2026-01-09 04:44:29] apptainer works
[2026-01-09 04:44:29] Set ATHENA_PROC_NUMBER=8
[2026-01-09 04:44:29] Set ATHENA_CORE_NUMBER=8
[2026-01-09 04:44:29] Starting ATLAS job with PandaID=6963149052
[2026-01-09 04:44:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:48:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:48:21] 2026-01-09 06:47:14,746 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 07:48:21] 2026-01-09 06:47:14,747 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 07:48:21] 2026-01-09 06:47:14,749 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963149052/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,750 | INFO     | extracted standard info from prmon json
[2026-01-09 07:48:21] 2026-01-09 06:47:14,750 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:48:21] 2026-01-09 06:47:14,750 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:48:21] 2026-01-09 06:47:14,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:48:21] 2026-01-09 06:47:14,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:48:21] 2026-01-09 06:47:14,754 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:48:21] 2026-01-09 06:47:14,755 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,756 | INFO     | sum of deviations: 80709633872.00005
[2026-01-09 07:48:21] 2026-01-09 06:47:14,756 | INFO     | mean x: 1767936150.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,756 | INFO     | mean y: 2381474.7185628745
[2026-01-09 07:48:21] 2026-01-09 06:47:14,757 | INFO     | intersect: -98802792792.39798
[2026-01-09 07:48:21] 2026-01-09 06:47:14,757 | INFO     | chi2: 7.351217576009039
[2026-01-09 07:48:21] 2026-01-09 06:47:14,757 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 07:48:21] 2026-01-09 06:47:14,759 | INFO     | sum of deviations: 88824589440.5
[2026-01-09 07:48:21] 2026-01-09 06:47:14,759 | INFO     | mean x: 1767935997.5
[2026-01-09 07:48:21] 2026-01-09 06:47:14,759 | INFO     | mean y: 2390980.660493827
[2026-01-09 07:48:21] 2026-01-09 06:47:14,759 | INFO     | intersect: -119119842757.017
[2026-01-09 07:48:21] 2026-01-09 06:47:14,759 | INFO     | chi2: 6.660212004384165
[2026-01-09 07:48:21] 2026-01-09 06:47:14,760 | INFO     | current chi2=6.660212004384165 (change=9.399879196610852 %)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,760 | INFO     | right removable region: 161
[2026-01-09 07:48:21] 2026-01-09 06:47:14,760 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 07:48:21] 2026-01-09 06:47:14,761 | INFO     | sum of deviations: 24871991099.000004
[2026-01-09 07:48:21] 2026-01-09 06:47:14,762 | INFO     | mean x: 1767936302.5
[2026-01-09 07:48:21] 2026-01-09 06:47:14,762 | INFO     | mean y: 2449048.925925926
[2026-01-09 07:48:21] 2026-01-09 06:47:14,762 | INFO     | intersect: -33353265478.045544
[2026-01-09 07:48:21] 2026-01-09 06:47:14,763 | INFO     | chi2: 2.4789108359847356
[2026-01-09 07:48:21] 2026-01-09 06:47:14,763 | INFO     | current chi2=2.4789108359847356 (change=66.27890808082256 %)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,763 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,764 | INFO     | sum of deviations: -7220615689.000002
[2026-01-09 07:48:21] 2026-01-09 06:47:14,764 | INFO     | mean x: 1767936455.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,764 | INFO     | mean y: 2490159.9617834394
[2026-01-09 07:48:21] 2026-01-09 06:47:14,765 | INFO     | intersect: 10641007849.807743
[2026-01-09 07:48:21] 2026-01-09 06:47:14,765 | INFO     | chi2: 0.8489595057717338
[2026-01-09 07:48:21] 2026-01-09 06:47:14,765 | INFO     | current chi2=0.8489595057717338 (change=65.75272117706128 %)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,765 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,766 | INFO     | sum of deviations: -8688761920.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,767 | INFO     | mean x: 1767936607.5
[2026-01-09 07:48:21] 2026-01-09 06:47:14,767 | INFO     | mean y: 2492097.197368421
[2026-01-09 07:48:21] 2026-01-09 06:47:14,767 | INFO     | intersect: 14109476814.36667
[2026-01-09 07:48:21] 2026-01-09 06:47:14,767 | INFO     | chi2: 0.8276530384468012
[2026-01-09 07:48:21] 2026-01-09 06:47:14,767 | INFO     | current chi2=0.8276530384468012 (change=2.509715384547625 %)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,768 | INFO     | left removable region: 30
[2026-01-09 07:48:21] 2026-01-09 06:47:14,768 | INFO     | sum of square deviations: 697054930.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,769 | INFO     | sum of deviations: 2639958061.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,769 | INFO     | mean x: 1767936882.0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,769 | INFO     | mean y: 2504384.8320610686
[2026-01-09 07:48:21] 2026-01-09 06:47:14,769 | INFO     | intersect: -6693207849.747653
[2026-01-09 07:48:21] 2026-01-09 06:47:14,770 | INFO     | chi2: 7.037540806222996e-05
[2026-01-09 07:48:21] 2026-01-09 06:47:14,770 | INFO     | current memory leak: 3.79 B/s (using 131 data points, chi2=0.00)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,771 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,771 | INFO     | ..............................
[2026-01-09 07:48:21] 2026-01-09 06:47:14,771 | INFO     | . Timing measurements:
[2026-01-09 07:48:21] 2026-01-09 06:47:14,771 | INFO     | . get job = 0 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,771 | INFO     | . initial setup = 13 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,772 | INFO     | . payload setup = 147 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,772 | INFO     | . stage-in = 0 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,772 | INFO     | . payload execution = 10318 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,772 | INFO     | . stage-out = 1 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,772 | INFO     | . log creation = 0 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,772 | INFO     | ..............................
[2026-01-09 07:48:21] 2026-01-09 06:47:14,892 | INFO     | 
[2026-01-09 07:48:21] 2026-01-09 06:47:14,892 | INFO     | job summary report
[2026-01-09 07:48:21] 2026-01-09 06:47:14,892 | INFO     | --------------------------------------------------
[2026-01-09 07:48:21] 2026-01-09 06:47:14,892 | INFO     | PanDA job id: 6963149052
[2026-01-09 07:48:21] 2026-01-09 06:47:14,892 | INFO     | task id: 47898826
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | errors: (none)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | pilot state: finished 
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | transexitcode: 0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | exeerrorcode: 0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | exeerrordiag: 
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | exitcode: 0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | exitmsg: OK
[2026-01-09 07:48:21] 2026-01-09 06:47:14,893 | INFO     | cpuconsumptiontime: 72226 s
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | nevents: 400
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | neventsw: 0
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | pid: 21416
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | pgrp: 21416
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | corecount: 8
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | event service: False
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | sizes: {0: 2283140, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 34: 2284109, 45: 2284265, 56: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 99: 2284713, 10
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | --------------------------------------------------
[2026-01-09 07:48:21] 2026-01-09 06:47:14,894 | INFO     | 
[2026-01-09 07:48:21] 2026-01-09 06:47:14,895 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-09 07:48:21] 2026-01-09 06:47:14,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,918 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,918 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,920 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,920 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:48:21] 2026-01-09 06:47:14,920 | INFO     | job 6963149052 has completed (purged errors)
[2026-01-09 07:48:21] 2026-01-09 06:47:14,920 | INFO     | overall cleanup function is called
[2026-01-09 07:48:21] 2026-01-09 06:47:15,928 | INFO     | --- collectZombieJob: --- 10, [21416]
[2026-01-09 07:48:21] 2026-01-09 06:47:15,929 | INFO     | zombie collector waiting for pid 21416
[2026-01-09 07:48:21] 2026-01-09 06:47:15,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:48:21] 2026-01-09 06:47:15,929 | INFO     | collected zombie processes
[2026-01-09 07:48:21] 2026-01-09 06:47:15,929 | INFO     | will attempt to kill all subprocesses of pid=21416
[2026-01-09 07:48:21] 2026-01-09 06:47:15,997 | INFO     | process IDs to be killed: [21416] (in reverse order)
[2026-01-09 07:48:21] 2026-01-09 06:47:16,044 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:48:21] 2026-01-09 06:47:16,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:48:21] 2026-01-09 06:47:16,047 | INFO     | did not find any defunct processes belonging to 21416
[2026-01-09 07:48:21] 2026-01-09 06:47:16,049 | INFO     | did not find any defunct processes belonging to 21416
[2026-01-09 07:48:21] 2026-01-09 06:47:16,049 | INFO     | ready for new job
[2026-01-09 07:48:21] 2026-01-09 06:47:16,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:48:21] 2026-01-09 06:47:16,051 | INFO     | ***************************************
[2026-01-09 07:48:21] 2026-01-09 06:47:16,051 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:48:21] 2026-01-09 06:47:16,051 | INFO     | ***************************************
[2026-01-09 07:48:21] 2026-01-09 06:47:16,052 | INFO     | 
[2026-01-09 07:48:21] 2026-01-09 06:47:16,052 | INFO     | pilot is running in a VM
[2026-01-09 07:48:21] 2026-01-09 06:47:16,052 | INFO     | architecture information:
[2026-01-09 07:48:21] 2026-01-09 06:47:16,053 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:48:21] 2026-01-09 06:47:16,079 | INFO     | cat /etc/os-release:
[2026-01-09 07:48:21] NAME="CentOS Linux"
[2026-01-09 07:48:21] VERSION="7 (Core)"
[2026-01-09 07:48:21] ID="centos"
[2026-01-09 07:48:21] ID_LIKE="rhel fedora"
[2026-01-09 07:48:21] VERSION_ID="7"
[2026-01-09 07:48:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:48:21] ANSI_COLOR="0;31"
[2026-01-09 07:48:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:48:21] HOME_URL="https://www.centos.org/"
[2026-01-09 07:48:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:48:21] 
[2026-01-09 07:48:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:48:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:48:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:48:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:48:21] 
[2026-01-09 07:48:21] 2026-01-09 06:47:16,079 | INFO     | ***************************************
[2026-01-09 07:48:21] 2026-01-09 06:47:16,582 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-09 07:48:21] 2026-01-09 06:47:16,603 | INFO     | sufficient remaining disk space (498115543040 B)
[2026-01-09 07:48:21] 2026-01-09 06:47:16,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:48:21] 2026-01-09 06:47:16,603 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:48:21] 2026-01-09 06:47:16,603 | INFO     | update_server=False
[2026-01-09 07:48:21] 2026-01-09 06:47:16,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:48:21] 2026-01-09 06:47:16,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:48:21] 2026-01-09 06:47:16,791 | INFO     | all data control threads have been joined
[2026-01-09 07:48:21] 2026-01-09 06:47:16,973 | INFO     | all job control threads have been joined
[2026-01-09 07:48:21] 2026-01-09 06:47:16,983 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 07:48:21] 2026-01-09 06:47:16,984 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 07:48:21] 2026-01-09 06:47:16,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:48:21] 2026-01-09 06:47:16,984 | INFO     | will abort loop
[2026-01-09 07:48:21] 2026-01-09 06:47:17,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:48:21] 2026-01-09 06:47:17,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:48:21] 2026-01-09 06:47:17,391 | INFO     | all payload control threads have been joined
[2026-01-09 07:48:21] 2026-01-09 06:47:17,609 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:17,610 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:17,716 | INFO     | [job] validate thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:17,721 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:17,797 | INFO     | [data] control thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:17,854 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:17,978 | INFO     | [job] control thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:17,990 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:18,015 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:18,254 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:18,314 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:18,397 | INFO     | [payload] control thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:18,465 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:18,919 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:19,026 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:21,133 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:48:21] 2026-01-09 06:47:47,011 | INFO     | PID=14931 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 07:48:21] 2026-01-09 06:47:47,012 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:48:21] 2026-01-09 06:47:47,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:48:21] 2026-01-09 06:47:47,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:48:21] 2026-01-09 06:48:14,607 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:48:21] 2026-01-09 06:48:16,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953138403136)>', '<ExcThread(monitor, started 139952541116160)>']
[2026-01-09 07:48:21] 2026-01-09 06:48:16,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:48:21] 2026-01-09 06:48:16,094 | INFO     | [monitor] control thread has ended
[2026-01-09 07:48:21] 2026-01-09 06:48:21,104 | INFO     | all workflow threads have been joined
[2026-01-09 07:48:21] 2026-01-09 06:48:21,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:48:21] 2026-01-09 06:48:21,104 | INFO     | traces error code: 0
[2026-01-09 07:48:21] 2026-01-09 06:48:21,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:48:21] 2026-01-09 06:48:21,253 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:48:21] 2026-01-09 06:48:21,257 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:48:21] 2026-01-09 06:48:21,260 [wrapper] pilotpid: 14931
[2026-01-09 07:48:21] 2026-01-09 06:48:21,264 [wrapper] Pilot exit status: 0
[2026-01-09 07:48:21] 2026-01-09 06:48:21,280 [wrapper] pandaids: 6963149052
[2026-01-09 07:48:21] 2026-01-09 06:48:21,316 [wrapper] cleanup supervisor_pilot  6550 14932
[2026-01-09 07:48:21] 2026-01-09 06:48:21,320 [wrapper] Test setup, not cleaning
[2026-01-09 07:48:21] 2026-01-09 06:48:21,325 [wrapper] apfmon messages muted
[2026-01-09 07:48:21] 2026-01-09 06:48:21,329 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:48:21] 2026-01-09 06:48:21,332 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:48:21]  *** Error codes and diagnostics ***
[2026-01-09 07:48:21]     "exeErrorCode": 0,
[2026-01-09 07:48:21]     "exeErrorDiag": "",
[2026-01-09 07:48:21]     "pilotErrorCode": 0,
[2026-01-09 07:48:21]     "pilotErrorDiag": "",
[2026-01-09 07:48:21]  *** Listing of results directory ***
[2026-01-09 07:48:21] total 437536
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:02 pilot3.tar.gz
[2026-01-09 07:48:21] -rwx------. 1 boinc boinc     36322 Jan  8 17:03 runpilot2-wrapper.sh
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc       100 Jan  9 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:48:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 04:44 run_atlas
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc       105 Jan  9 04:44 job.xml
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc      6391 Jan  9 04:44 init_data.xml
[2026-01-09 07:48:21] -rw-r--r--. 2 boinc boinc 225528431 Jan  9 04:44 EVNT.47898824._001121.pool.root.1
[2026-01-09 07:48:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:44 start_atlas.sh
[2026-01-09 07:48:21] drwxrwx--x. 2 boinc boinc        68 Jan  9 04:44 shared
[2026-01-09 07:48:21] -rw-r--r--. 2 boinc boinc    592402 Jan  9 04:44 input.tar.gz
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc         0 Jan  9 04:44 boinc_lockfile
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc      2518 Jan  9 04:44 pandaJob.out
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc    989771 Jan  9 04:48 agis_schedconf.cvmfs.json
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc   1516240 Jan  9 04:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:48:21] drwx------. 5 boinc boinc      4096 Jan  9 04:48 pilot3
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc 214985941 Jan  9 07:46 HITS.47898826._028400.pool.root.1
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc       531 Jan  9 07:46 boinc_task_state.xml
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc      1011 Jan  9 07:47 memory_monitor_summary.json
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc    392445 Jan  9 07:47 log.47898826._028400.job.log.tgz.1
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc        95 Jan  9 07:47 pilot_heartbeat.json
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc      7770 Jan  9 07:47 heartbeat.json
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc      8192 Jan  9 07:47 boinc_mmap_file
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc        28 Jan  9 07:47 wrapper_checkpoint.txt
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc      4996 Jan  9 07:48 pilotlog.txt
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc   1421211 Jan  9 07:48 log.47898826._028400.job.log.1
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc       357 Jan  9 07:48 output.list
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc       620 Jan  9 07:48 runtime_log
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc   1832960 Jan  9 07:48 result.tar.gz
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc      8833 Jan  9 07:48 runtime_log.err
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc       655 Jan  9 07:48 hdjMDmGf7x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYgfKDmHSfrRo.diag
[2026-01-09 07:48:21] -rw-r--r--. 1 boinc boinc     20781 Jan  9 07:48 stderr.txt
[2026-01-09 07:48:21] HITS file was successfully produced:
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc 214985941 Jan  9 07:46 shared/HITS.pool.root.1
[2026-01-09 07:48:21]  *** Contents of shared directory: ***
[2026-01-09 07:48:21] total 432580
[2026-01-09 07:48:21] -rw-r--r--. 2 boinc boinc 225528431 Jan  9 04:44 ATLAS.root_0
[2026-01-09 07:48:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 04:44 start_atlas.sh
[2026-01-09 07:48:21] -rw-r--r--. 2 boinc boinc    592402 Jan  9 04:44 input.tar.gz
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc 214985941 Jan  9 07:46 HITS.pool.root.1
[2026-01-09 07:48:21] -rw-------. 1 boinc boinc   1832960 Jan  9 07:48 result.tar.gz
07:48:23 (11174): run_atlas exited; CPU time 72332.640359
07:48:23 (11174): called boinc_finish(0)

</stderr_txt>
]]>

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