Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:05:41 (3013022): wrapper (7.7.26015): starting
23:05:41 (3013022): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 23:05:41] Arguments: --nthreads 12
[2026-01-08 23:05:41] Threads: 12
[2026-01-08 23:05:41] Checking for CVMFS
[2026-01-08 23:05:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:05:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:05:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:05:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:05:41] 2.13.0.0 2986653 62 45616 154920 1 57 5092843 6144001 0 130560 0 76856 99.998 1414 356 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 23:05:41] CVMFS is ok
[2026-01-08 23:05:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:05:41] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 23:05:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 23:05:41] Further information can be found at the LHC@home message board.
[2026-01-08 23:05:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:05:41] Checking for apptainer binary...
[2026-01-08 23:05:41] apptainer is not installed, using version from CVMFS
[2026-01-08 23:05:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:05:41] Debian-bookworm-latest-amd64-base
[2026-01-08 23:05:41] apptainer works
[2026-01-08 23:05:41] Set ATHENA_PROC_NUMBER=12
[2026-01-08 23:05:41] Set ATHENA_CORE_NUMBER=12
[2026-01-08 23:05:41] Starting ATLAS job with PandaID=6962322379
[2026-01-08 23:05:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 00:05:09]  *** The last 200 lines of the pilot log: ***
[2026-01-09 00:05:09]  lfn=log.47898826._015248.job.log.tgz.1
[2026-01-09 00:05:09]  mtime=0
[2026-01-09 00:05:09]  protocol_id=None
[2026-01-09 00:05:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 00:05:09]  replicas=None
[2026-01-09 00:05:09]  scope=mc23_13p6TeV
[2026-01-09 00:05:09]  status=None
[2026-01-09 00:05:09]  status_code=0
[2026-01-09 00:05:09]  storage_token=
[2026-01-09 00:05:09]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6962322379/log.47898826._015248.job.log.tgz.1
[2026-01-09 00:05:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/c4/log.47898826._015248.job.log.tgz.1
[2026-01-09 00:05:09]  workdir=None
[2026-01-09 00:05:09] ]
[2026-01-09 00:05:09] 2026-01-08 23:04:29,803 | INFO     | transferring file log.47898826._015248.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6962322379/log.47898826._015248.job.log.tgz.1 to /var/lib/boinc
[2026-01-09 00:05:09] 2026-01-08 23:04:29,803 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6962322379/log.47898826._015248.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.478988
[2026-01-09 00:05:09] 2026-01-08 23:04:29,827 | INFO     | adding to output.list: log.47898826._015248.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/c4/log.47898826._015248.job.log.tg
[2026-01-09 00:05:09] 2026-01-08 23:04:29,828 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 00:05:09] 2026-01-08 23:04:29,828 | INFO     | summary of transferred files:
[2026-01-09 00:05:09] 2026-01-08 23:04:29,828 | INFO     |  -- lfn=log.47898826._015248.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 00:05:09] 2026-01-08 23:04:29,828 | INFO     | stage-out finished correctly
[2026-01-09 00:05:09] 2026-01-08 23:04:29,868 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 00:05:09] 2026-01-08 23:04:29,908 | INFO     | job 6962322379 has state=finished
[2026-01-09 00:05:09] 2026-01-08 23:04:29,908 | INFO     | preparing for final server update for job 6962322379 in state='finished'
[2026-01-09 00:05:09] 2026-01-08 23:04:29,908 | INFO     | this job has now completed (state=finished)
[2026-01-09 00:05:09] 2026-01-08 23:04:29,908 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 00:05:09] 2026-01-08 23:04:29,908 | INFO     | log transfer has been attempted: DONE
[2026-01-09 00:05:09] 2026-01-08 23:04:29,909 | INFO     | job 6962322379 has finished - writing final server update
[2026-01-09 00:05:09] 2026-01-08 23:04:29,909 | INFO     | total number of processed events: 400 (read)
[2026-01-09 00:05:09] 2026-01-08 23:04:29,909 | INFO     | executing command: lscpu
[2026-01-09 00:05:09] 2026-01-08 23:04:29,925 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 00:05:09] 2026-01-08 23:04:29,965 | INFO     | PID=3016854 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 00:05:09] 2026-01-08 23:04:30,965 | INFO     | time since job start (3524s) is within the limit (174528.0s)
[2026-01-09 00:05:09] 2026-01-08 23:04:32,029 | INFO     | monitor loop #271: job 0:6962322379 is in state 'finished'
[2026-01-09 00:05:09] 2026-01-08 23:04:32,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 00:05:09] 2026-01-08 23:04:32,970 | INFO     | time since job start (3526s) is within the limit (174528.0s)
[2026-01-09 00:05:09] 2026-01-08 23:04:34,532 | INFO     | monitor loop #272: job 0:6962322379 is in state 'finished'
[2026-01-09 00:05:09] 2026-01-08 23:04:34,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 00:05:09] 2026-01-08 23:04:34,974 | INFO     | time since job start (3528s) is within the limit (174528.0s)
[2026-01-09 00:05:09] 2026-01-08 23:04:36,438 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 00:05:09] 2026-01-08 23:04:36,439 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3958.173875
[2026-01-09 00:05:09] 2026-01-08 23:04:36,441 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6962322379/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 00:05:09] 2026-01-08 23:04:36,441 | INFO     | extracted standard info from prmon json
[2026-01-09 00:05:09] 2026-01-08 23:04:36,441 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 00:05:09] 2026-01-08 23:04:36,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 00:05:09] 2026-01-08 23:04:36,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 00:05:09] 2026-01-08 23:04:36,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | fitting pss+swap vs Time
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | sum of square deviations: 41117050.0
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | sum of deviations: -1342742491.9999998
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | mean x: 1767911795.0
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | mean y: 2779965.6470588236
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | intersect: 57736744081.6158
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | chi2: 0.06412220400139933
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | current memory leak: -32.66 B/s (using 51 data points, chi2=0.06)
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | could have reported an average CPU frequency of 3995 MHz (5 samples)
[2026-01-09 00:05:09] 2026-01-08 23:04:36,442 | INFO     | ..............................
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . Timing measurements:
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . get job = 0 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . initial setup = 1 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . payload setup = 2 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . stage-in = 0 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . payload execution = 3501 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . stage-out = 0 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | . log creation = 0 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,443 | INFO     | ..............................
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | 
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | job summary report
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | --------------------------------------------------
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | PanDA job id: 6962322379
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | task id: 47898826
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | errors: (none)
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | pilot state: finished 
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | transexitcode: 0
[2026-01-09 00:05:09] 2026-01-08 23:04:36,483 | INFO     | exeerrorcode: 0
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | exeerrordiag: 
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | exitcode: 0
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | exitmsg: OK
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | cpuconsumptiontime: 39181 s
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | nevents: 400
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | neventsw: 0
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | pid: 3023678
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | pgrp: 3023678
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | corecount: 12
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | event service: False
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | sizes: {0: 2283749, 1: 2284004, 3: 2284266, 11: 2284294, 3508: 2310030, 3509: 2310029, 3510: 2319281, 3517: 2319451}
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | --------------------------------------------------
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | 
[2026-01-09 00:05:09] 2026-01-08 23:04:36,484 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-09 00:05:09] 2026-01-08 23:04:36,495 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,495 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,495 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,495 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | job 6962322379 has completed (purged errors)
[2026-01-09 00:05:09] 2026-01-08 23:04:36,496 | INFO     | overall cleanup function is called
[2026-01-09 00:05:09] 2026-01-08 23:04:37,503 | INFO     | --- collectZombieJob: --- 10, [3023678]
[2026-01-09 00:05:09] 2026-01-08 23:04:37,503 | INFO     | zombie collector waiting for pid 3023678
[2026-01-09 00:05:09] 2026-01-08 23:04:37,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 00:05:09] 2026-01-08 23:04:37,511 | INFO     | collected zombie processes
[2026-01-09 00:05:09] 2026-01-08 23:04:37,511 | INFO     | will attempt to kill all subprocesses of pid=3023678
[2026-01-09 00:05:09] 2026-01-08 23:04:37,575 | INFO     | process IDs to be killed: [3023678] (in reverse order)
[2026-01-09 00:05:09] 2026-01-08 23:04:37,599 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 00:05:09] 2026-01-08 23:04:37,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 00:05:09] 2026-01-08 23:04:37,601 | INFO     | did not find any defunct processes belonging to 3023678
[2026-01-09 00:05:09] 2026-01-08 23:04:37,602 | INFO     | did not find any defunct processes belonging to 3023678
[2026-01-09 00:05:09] 2026-01-08 23:04:37,602 | INFO     | ready for new job
[2026-01-09 00:05:09] 2026-01-08 23:04:37,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 00:05:09] 2026-01-08 23:04:37,603 | INFO     | ***************************************
[2026-01-09 00:05:09] 2026-01-08 23:04:37,603 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 00:05:09] 2026-01-08 23:04:37,604 | INFO     | ***************************************
[2026-01-09 00:05:09] 2026-01-08 23:04:37,604 | INFO     | 
[2026-01-09 00:05:09] 2026-01-08 23:04:37,604 | INFO     | architecture information:
[2026-01-09 00:05:09] 2026-01-08 23:04:37,605 | INFO     | executing command: cat /etc/os-release
[2026-01-09 00:05:09] 2026-01-08 23:04:37,613 | INFO     | cat /etc/os-release:
[2026-01-09 00:05:09] NAME="CentOS Linux"
[2026-01-09 00:05:09] VERSION="7 (Core)"
[2026-01-09 00:05:09] ID="centos"
[2026-01-09 00:05:09] ID_LIKE="rhel fedora"
[2026-01-09 00:05:09] VERSION_ID="7"
[2026-01-09 00:05:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 00:05:09] ANSI_COLOR="0;31"
[2026-01-09 00:05:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 00:05:09] HOME_URL="https://www.centos.org/"
[2026-01-09 00:05:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 00:05:09] 
[2026-01-09 00:05:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 00:05:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 00:05:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 00:05:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 00:05:09] 
[2026-01-09 00:05:09] 2026-01-08 23:04:37,614 | INFO     | ***************************************
[2026-01-09 00:05:09] 2026-01-08 23:04:38,117 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-09 00:05:09] 2026-01-08 23:04:38,130 | INFO     | sufficient remaining disk space (710873710592 B)
[2026-01-09 00:05:09] 2026-01-08 23:04:38,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 00:05:09] 2026-01-08 23:04:38,131 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 00:05:09] 2026-01-08 23:04:38,131 | INFO     | update_server=False
[2026-01-09 00:05:09] 2026-01-08 23:04:38,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 00:05:09] 2026-01-08 23:04:38,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 00:05:09] 2026-01-08 23:04:38,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:05:09] 2026-01-08 23:04:38,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:05:09] 2026-01-08 23:04:38,132 | INFO     | aborting loop
[2026-01-09 00:05:09] 2026-01-08 23:04:38,621 | INFO     | all data control threads have been joined
[2026-01-09 00:05:09] 2026-01-08 23:04:39,134 | INFO     | [job] retrieve thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:39,134 | INFO     | [job] queue monitor thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:39,137 | INFO     | [job] job monitor thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:39,216 | INFO     | all job control threads have been joined
[2026-01-09 00:05:09] 2026-01-08 23:04:39,573 | INFO     | all payload control threads have been joined
[2026-01-09 00:05:09] 2026-01-08 23:04:39,626 | INFO     | [data] control thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:39,925 | INFO     | [data] copytool_in thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:39,925 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:39,929 | INFO     | [job] validate thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:40,137 | INFO     | [data] copytool_out thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:40,221 | INFO     | [job] control thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:40,375 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:40,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 00:05:09] 2026-01-08 23:04:40,433 | INFO     | [payload] validate_post thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:40,573 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:40,578 | INFO     | [payload] control thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:40,609 | INFO     | [payload] failed_post thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:44,422 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:48,502 | INFO     | job.realtimelogging is not enabled
[2026-01-09 00:05:09] 2026-01-08 23:04:49,507 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 00:05:09] 2026-01-08 23:04:52,190 | INFO     | [monitor] cgroup control has ended
[2026-01-09 00:05:09] 2026-01-08 23:04:53,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482248116032)>', '<ExcThread(monitor, started 140481711294208)>']
[2026-01-09 00:05:09] 2026-01-08 23:04:58,538 | INFO     | all workflow threads have been joined
[2026-01-09 00:05:09] 2026-01-08 23:04:58,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 00:05:09] 2026-01-08 23:04:58,538 | INFO     | traces error code: 0
[2026-01-09 00:05:09] 2026-01-08 23:04:58,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 00:05:09] 2026-01-08 23:05:08,126 | INFO     | PID=3016854 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 00:05:09] 2026-01-08 23:05:08,127 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 00:05:09] 2026-01-08 23:05:08,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 00:05:09] 2026-01-08 23:05:08,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 00:05:09] 2026-01-08 23:05:08,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 00:05:09] 2026-01-08 23:05:08,127 | INFO     | [monitor] control thread has ended
[2026-01-09 00:05:09] 2026-01-08 23:05:08,462 [wrapper] ==== pilot stdout END ====
[2026-01-09 00:05:09] 2026-01-08 23:05:08,506 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 00:05:09] 2026-01-08 23:05:08,522 [wrapper] pilotpid: 3016854
[2026-01-09 00:05:09] 2026-01-08 23:05:08,554 [wrapper] Pilot exit status: 0
[2026-01-09 00:05:09] 2026-01-08 23:05:08,722 [wrapper] pandaids: 6962322379
[2026-01-09 00:05:09] 2026-01-08 23:05:08,814 [wrapper] cleanup supervisor_pilot 3033828 3016855
[2026-01-09 00:05:09] 2026-01-08 23:05:08,826 [wrapper] Test setup, not cleaning
[2026-01-09 00:05:09] 2026-01-08 23:05:08,855 [wrapper] apfmon messages muted
[2026-01-09 00:05:09] 2026-01-08 23:05:08,875 [wrapper] ==== wrapper stdout END ====
[2026-01-09 00:05:09] 2026-01-08 23:05:08,902 [wrapper] ==== wrapper stderr END ====
[2026-01-09 00:05:09]  *** Error codes and diagnostics ***
[2026-01-09 00:05:09]     "exeErrorCode": 0,
[2026-01-09 00:05:09]     "exeErrorDiag": "",
[2026-01-09 00:05:09]     "pilotErrorCode": 0,
[2026-01-09 00:05:09]     "pilotErrorDiag": "",
[2026-01-09 00:05:09]  *** Listing of results directory ***
[2026-01-09 00:05:09] total 440104
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-09 00:05:09] -rwx------ 1 boinc boinc     36322 Jan  7 22:06 runpilot2-wrapper.sh
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:12 queuedata.json
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc       100 Jan  8 23:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 00:05:09] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 23:05 run_atlas
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc       105 Jan  8 23:05 job.xml
[2026-01-09 00:05:09] -rw-r--r-- 2 boinc boinc     15847 Jan  8 23:05 start_atlas.sh
[2026-01-09 00:05:09] drwxrwx--x 2 boinc boinc      4096 Jan  8 23:05 shared
[2026-01-09 00:05:09] -rw-r--r-- 2 boinc boinc    592401 Jan  8 23:05 input.tar.gz
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc      6727 Jan  8 23:05 init_data.xml
[2026-01-09 00:05:09] -rw-r--r-- 2 boinc boinc 224217998 Jan  8 23:05 EVNT.47898824._000714.pool.root.1
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc         0 Jan  8 23:05 boinc_lockfile
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc      2519 Jan  8 23:05 pandaJob.out
[2026-01-09 00:05:09] -rw------- 1 boinc boinc    989845 Jan  8 23:05 agis_schedconf.cvmfs.json
[2026-01-09 00:05:09] -rw------- 1 boinc boinc   1516240 Jan  8 23:05 agis_ddmendpoints.agis.ALL.json
[2026-01-09 00:05:09] drwx------ 5 boinc boinc      4096 Jan  8 23:05 pilot3
[2026-01-09 00:05:09] -rw------- 1 boinc boinc 220751184 Jan  9 00:04 HITS.47898826._015248.pool.root.1
[2026-01-09 00:05:09] -rw------- 1 boinc boinc        95 Jan  9 00:04 pilot_heartbeat.json
[2026-01-09 00:05:09] -rw------- 1 boinc boinc      1013 Jan  9 00:04 memory_monitor_summary.json
[2026-01-09 00:05:09] -rw------- 1 boinc boinc    362663 Jan  9 00:04 log.47898826._015248.job.log.tgz.1
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc       529 Jan  9 00:04 boinc_task_state.xml
[2026-01-09 00:05:09] -rw------- 1 boinc boinc      7775 Jan  9 00:04 heartbeat.json
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc        27 Jan  9 00:05 wrapper_checkpoint.txt
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc      8192 Jan  9 00:05 boinc_mmap_file
[2026-01-09 00:05:09] -rw------- 1 boinc boinc       747 Jan  9 00:05 pilotlog.txt
[2026-01-09 00:05:09] -rw------- 1 boinc boinc    531344 Jan  9 00:05 log.47898826._015248.job.log.1
[2026-01-09 00:05:09] -rw------- 1 boinc boinc       357 Jan  9 00:05 output.list
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc       620 Jan  9 00:05 runtime_log
[2026-01-09 00:05:09] -rw------- 1 boinc boinc    911360 Jan  9 00:05 result.tar.gz
[2026-01-09 00:05:09] -rw------- 1 boinc boinc       706 Jan  9 00:05 vh6LDmVupx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTtdKDmMCOZWm.diag
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc      9132 Jan  9 00:05 runtime_log.err
[2026-01-09 00:05:09] -rw-r--r-- 1 boinc boinc     21922 Jan  9 00:05 stderr.txt
[2026-01-09 00:05:09] HITS file was successfully produced:
[2026-01-09 00:05:09] -rw------- 1 boinc boinc 220751184 Jan  9 00:04 shared/HITS.pool.root.1
[2026-01-09 00:05:09]  *** Contents of shared directory: ***
[2026-01-09 00:05:09] total 436040
[2026-01-09 00:05:09] -rw-r--r-- 2 boinc boinc     15847 Jan  8 23:05 start_atlas.sh
[2026-01-09 00:05:09] -rw-r--r-- 2 boinc boinc    592401 Jan  8 23:05 input.tar.gz
[2026-01-09 00:05:09] -rw-r--r-- 2 boinc boinc 224217998 Jan  8 23:05 ATLAS.root_0
[2026-01-09 00:05:09] -rw------- 1 boinc boinc 220751184 Jan  9 00:04 HITS.pool.root.1
[2026-01-09 00:05:09] -rw------- 1 boinc boinc    911360 Jan  9 00:05 result.tar.gz
00:05:11 (3013022): run_atlas exited; CPU time 39203.157071
00:05:11 (3013022): called boinc_finish(0)

</stderr_txt>
]]>

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