Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:55:56 (14843): wrapper (7.7.26015): starting
03:55:56 (14843): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 03:55:56] Arguments: --nthreads 8
[2026-01-09 03:55:56] Threads: 8
[2026-01-09 03:55:56] Checking for CVMFS
[2026-01-09 03:55:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 03:55:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 03:55:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 03:56:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 03:56:00] 2.11.2.0 9379 17439 103040 154927 1 100 20229931 25165825 1088 130560 0 1960792 99.300 6680874 1915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 03:56:00] CVMFS is ok
[2026-01-09 03:56:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 03:56:00] Checking for apptainer binary...
[2026-01-09 03:56:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 03:56:00] Running /usr/bin/apptainer --version
[2026-01-09 03:56:00] apptainer version 1.3.2-1.el7
[2026-01-09 03:56:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 03:56:09] cg-vwn452.simple-grid.lan
[2026-01-09 03:56:09] apptainer works
[2026-01-09 03:56:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 03:56:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 03:56:09] Starting ATLAS job with PandaID=6963079289
[2026-01-09 03:56:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:46:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:46:06] 2026-01-09 06:45:08,150 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 07:46:06] 2026-01-09 06:45:08,151 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 07:46:06] 2026-01-09 06:45:08,153 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963079289/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,154 | INFO     | extracted standard info from prmon json
[2026-01-09 07:46:06] 2026-01-09 06:45:08,154 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 07:46:06] 2026-01-09 06:45:08,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 07:46:06] 2026-01-09 06:45:08,154 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 07:46:06] 2026-01-09 06:45:08,154 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 07:46:06] 2026-01-09 06:45:08,159 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:46:06] 2026-01-09 06:45:08,159 | INFO     | sum of square deviations: 2954447953.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,161 | INFO     | sum of deviations: 100569978248.00002
[2026-01-09 07:46:06] 2026-01-09 06:45:08,161 | INFO     | mean x: 1767934633.5
[2026-01-09 07:46:06] 2026-01-09 06:45:08,161 | INFO     | mean y: 2417667.952830189
[2026-01-09 07:46:06] 2026-01-09 06:45:08,162 | INFO     | intersect: -60178418299.87608
[2026-01-09 07:46:06] 2026-01-09 06:45:08,162 | INFO     | chi2: 9.236353214011542
[2026-01-09 07:46:06] 2026-01-09 06:45:08,163 | INFO     | sum of square deviations: 2750295288.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,164 | INFO     | sum of deviations: 112279836842.99998
[2026-01-09 07:46:06] 2026-01-09 06:45:08,164 | INFO     | mean x: 1767934481.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,165 | INFO     | mean y: 2426214.6618357487
[2026-01-09 07:46:06] 2026-01-09 06:45:08,165 | INFO     | intersect: -72172876539.88147
[2026-01-09 07:46:06] 2026-01-09 06:45:08,165 | INFO     | chi2: 8.555436993178485
[2026-01-09 07:46:06] 2026-01-09 06:45:08,165 | INFO     | current chi2=8.555436993178485 (change=7.3721327568991954 %)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,165 | INFO     | right removable region: 206
[2026-01-09 07:46:06] 2026-01-09 06:45:08,166 | INFO     | sum of square deviations: 2750295288.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,167 | INFO     | sum of deviations: 27011835536.000008
[2026-01-09 07:46:06] 2026-01-09 06:45:08,168 | INFO     | mean x: 1767934786.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,168 | INFO     | mean y: 2472578.618357488
[2026-01-09 07:46:06] 2026-01-09 06:45:08,168 | INFO     | intersect: -17361177021.542454
[2026-01-09 07:46:06] 2026-01-09 06:45:08,168 | INFO     | chi2: 4.004988154096296
[2026-01-09 07:46:06] 2026-01-09 06:45:08,168 | INFO     | current chi2=4.004988154096296 (change=56.638858851557 %)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,169 | INFO     | sum of square deviations: 2555770710.5
[2026-01-09 07:46:06] 2026-01-09 06:45:08,170 | INFO     | sum of deviations: -29913734184.999996
[2026-01-09 07:46:06] 2026-01-09 06:45:08,171 | INFO     | mean x: 1767934938.5
[2026-01-09 07:46:06] 2026-01-09 06:45:08,171 | INFO     | mean y: 2517150.405940594
[2026-01-09 07:46:06] 2026-01-09 06:45:08,171 | INFO     | intersect: 20695115116.80059
[2026-01-09 07:46:06] 2026-01-09 06:45:08,171 | INFO     | chi2: 1.1229490569270577
[2026-01-09 07:46:06] 2026-01-09 06:45:08,171 | INFO     | current chi2=1.1229490569270577 (change=71.96123899196787 %)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,172 | INFO     | sum of square deviations: 2370641658.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,173 | INFO     | sum of deviations: -43523446808.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,174 | INFO     | mean x: 1767935091.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,174 | INFO     | mean y: 2528283.7868020306
[2026-01-09 07:46:06] 2026-01-09 06:45:08,174 | INFO     | intersect: 32460672530.712517
[2026-01-09 07:46:06] 2026-01-09 06:45:08,174 | INFO     | chi2: 0.8818157950637519
[2026-01-09 07:46:06] 2026-01-09 06:45:08,175 | INFO     | current chi2=0.8818157950637519 (change=21.473214690893045 %)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,175 | INFO     | left removable region: 30
[2026-01-09 07:46:06] 2026-01-09 06:45:08,175 | INFO     | sum of square deviations: 1690450300.0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,176 | INFO     | sum of deviations: -24412390594.5
[2026-01-09 07:46:06] 2026-01-09 06:45:08,177 | INFO     | mean x: 1767935365.5
[2026-01-09 07:46:06] 2026-01-09 06:45:08,177 | INFO     | mean y: 2535761.6193181816
[2026-01-09 07:46:06] 2026-01-09 06:45:08,177 | INFO     | intersect: 25533915588.885532
[2026-01-09 07:46:06] 2026-01-09 06:45:08,177 | INFO     | chi2: 0.07339472010574218
[2026-01-09 07:46:06] 2026-01-09 06:45:08,178 | INFO     | current memory leak: -14.44 B/s (using 176 data points, chi2=0.07)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,179 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,179 | INFO     | ..............................
[2026-01-09 07:46:06] 2026-01-09 06:45:08,179 | INFO     | . Timing measurements:
[2026-01-09 07:46:06] 2026-01-09 06:45:08,179 | INFO     | . get job = 0 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,179 | INFO     | . initial setup = 8 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,179 | INFO     | . payload setup = 154 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,180 | INFO     | . stage-in = 0 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,180 | INFO     | . payload execution = 13073 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,180 | INFO     | . stage-out = 1 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,180 | INFO     | . log creation = 0 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,180 | INFO     | ..............................
[2026-01-09 07:46:06] 2026-01-09 06:45:08,681 | INFO     | 
[2026-01-09 07:46:06] 2026-01-09 06:45:08,682 | INFO     | job summary report
[2026-01-09 07:46:06] 2026-01-09 06:45:08,682 | INFO     | --------------------------------------------------
[2026-01-09 07:46:06] 2026-01-09 06:45:08,682 | INFO     | PanDA job id: 6963079289
[2026-01-09 07:46:06] 2026-01-09 06:45:08,682 | INFO     | task id: 47898826
[2026-01-09 07:46:06] 2026-01-09 06:45:08,682 | INFO     | errors: (none)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:46:06] 2026-01-09 06:45:08,682 | INFO     | pilot state: finished 
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | transexitcode: 0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | exeerrorcode: 0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | exeerrordiag: 
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | exitcode: 0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | exitmsg: OK
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | cpuconsumptiontime: 74678 s
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | nevents: 400
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | neventsw: 0
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | pid: 25130
[2026-01-09 07:46:06] 2026-01-09 06:45:08,683 | INFO     | pgrp: 25130
[2026-01-09 07:46:06] 2026-01-09 06:45:08,684 | INFO     | corecount: 8
[2026-01-09 07:46:06] 2026-01-09 06:45:08,684 | INFO     | event service: False
[2026-01-09 07:46:06] 2026-01-09 06:45:08,684 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 23: 2284025, 33: 2284053, 44: 2284109, 55: 2284265, 65: 2284293, 76: 2284321, 87: 2284377, 98: 2284405, 109: 2285031, 
[2026-01-09 07:46:06] 2026-01-09 06:45:08,684 | INFO     | --------------------------------------------------
[2026-01-09 07:46:06] 2026-01-09 06:45:08,684 | INFO     | 
[2026-01-09 07:46:06] 2026-01-09 06:45:08,684 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 07:46:06] 2026-01-09 06:45:08,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:46:06] 2026-01-09 06:45:08,713 | INFO     | job 6963079289 has completed (purged errors)
[2026-01-09 07:46:06] 2026-01-09 06:45:08,713 | INFO     | overall cleanup function is called
[2026-01-09 07:46:06] 2026-01-09 06:45:09,721 | INFO     | --- collectZombieJob: --- 10, [25130]
[2026-01-09 07:46:06] 2026-01-09 06:45:09,722 | INFO     | zombie collector waiting for pid 25130
[2026-01-09 07:46:06] 2026-01-09 06:45:09,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:46:06] 2026-01-09 06:45:09,722 | INFO     | collected zombie processes
[2026-01-09 07:46:06] 2026-01-09 06:45:09,722 | INFO     | will attempt to kill all subprocesses of pid=25130
[2026-01-09 07:46:06] 2026-01-09 06:45:09,786 | INFO     | process IDs to be killed: [25130] (in reverse order)
[2026-01-09 07:46:06] 2026-01-09 06:45:09,837 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:46:06] 2026-01-09 06:45:09,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:46:06] 2026-01-09 06:45:09,839 | INFO     | did not find any defunct processes belonging to 25130
[2026-01-09 07:46:06] 2026-01-09 06:45:09,841 | INFO     | did not find any defunct processes belonging to 25130
[2026-01-09 07:46:06] 2026-01-09 06:45:09,841 | INFO     | ready for new job
[2026-01-09 07:46:06] 2026-01-09 06:45:09,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:46:06] 2026-01-09 06:45:09,843 | INFO     | ***************************************
[2026-01-09 07:46:06] 2026-01-09 06:45:09,843 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:46:06] 2026-01-09 06:45:09,843 | INFO     | ***************************************
[2026-01-09 07:46:06] 2026-01-09 06:45:09,844 | INFO     | 
[2026-01-09 07:46:06] 2026-01-09 06:45:09,844 | INFO     | pilot is running in a VM
[2026-01-09 07:46:06] 2026-01-09 06:45:09,844 | INFO     | architecture information:
[2026-01-09 07:46:06] 2026-01-09 06:45:09,845 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:46:06] 2026-01-09 06:45:09,863 | INFO     | cat /etc/os-release:
[2026-01-09 07:46:06] NAME="CentOS Linux"
[2026-01-09 07:46:06] VERSION="7 (Core)"
[2026-01-09 07:46:06] ID="centos"
[2026-01-09 07:46:06] ID_LIKE="rhel fedora"
[2026-01-09 07:46:06] VERSION_ID="7"
[2026-01-09 07:46:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:46:06] ANSI_COLOR="0;31"
[2026-01-09 07:46:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:46:06] HOME_URL="https://www.centos.org/"
[2026-01-09 07:46:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:46:06] 
[2026-01-09 07:46:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:46:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:46:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:46:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:46:06] 
[2026-01-09 07:46:06] 2026-01-09 06:45:09,864 | INFO     | ***************************************
[2026-01-09 07:46:06] 2026-01-09 06:45:10,367 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 07:46:06] 2026-01-09 06:45:10,386 | INFO     | sufficient remaining disk space (498283315200 B)
[2026-01-09 07:46:06] 2026-01-09 06:45:10,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:46:06] 2026-01-09 06:45:10,387 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:46:06] 2026-01-09 06:45:10,387 | INFO     | update_server=False
[2026-01-09 07:46:06] 2026-01-09 06:45:10,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:46:06] 2026-01-09 06:45:10,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:46:06] 2026-01-09 06:45:10,388 | INFO     | aborting loop
[2026-01-09 07:46:06] 2026-01-09 06:45:10,553 | INFO     | all job control threads have been joined
[2026-01-09 07:46:06] 2026-01-09 06:45:10,998 | INFO     | all data control threads have been joined
[2026-01-09 07:46:06] 2026-01-09 06:45:11,393 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:11,394 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:11,515 | INFO     | all payload control threads have been joined
[2026-01-09 07:46:06] 2026-01-09 06:45:11,559 | INFO     | [job] control thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:11,805 | INFO     | [job] validate thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:11,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:46:06] 2026-01-09 06:45:11,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:46:06] 2026-01-09 06:45:11,928 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:12,004 | INFO     | [data] control thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:12,208 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:12,391 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:12,468 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:12,520 | INFO     | [payload] control thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:12,541 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:12,615 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:13,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:46:06] 2026-01-09 06:45:13,818 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:14,303 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:15,925 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:20,981 | INFO     | job.realtimelogging is not enabled
[2026-01-09 07:46:06] 2026-01-09 06:45:21,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:46:06] 2026-01-09 06:45:35,389 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-01-09 07:46:06] 2026-01-09 06:45:40,958 | INFO     | PID=18605 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 07:46:06] 2026-01-09 06:45:40,959 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:46:06] 2026-01-09 06:45:40,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:46:06] 2026-01-09 06:45:40,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:46:06] 2026-01-09 06:45:59,236 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:46:06] 2026-01-09 06:46:01,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572962998080)>', '<ExcThread(monitor, started 140572383762176)>']
[2026-01-09 07:46:06] 2026-01-09 06:46:02,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:46:06] 2026-01-09 06:46:02,068 | INFO     | [monitor] control thread has ended
[2026-01-09 07:46:06] 2026-01-09 06:46:06,315 | INFO     | all workflow threads have been joined
[2026-01-09 07:46:06] 2026-01-09 06:46:06,315 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:46:06] 2026-01-09 06:46:06,315 | INFO     | traces error code: 0
[2026-01-09 07:46:06] 2026-01-09 06:46:06,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:46:06] 2026-01-09 06:46:06,457 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:46:06] 2026-01-09 06:46:06,461 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:46:06] 2026-01-09 06:46:06,465 [wrapper] pilotpid: 18605
[2026-01-09 07:46:06] 2026-01-09 06:46:06,468 [wrapper] Pilot exit status: 0
[2026-01-09 07:46:06] 2026-01-09 06:46:06,485 [wrapper] pandaids: 6963079289
[2026-01-09 07:46:06] 2026-01-09 06:46:06,523 [wrapper] cleanup supervisor_pilot 17399 18606
[2026-01-09 07:46:06] 2026-01-09 06:46:06,528 [wrapper] Test setup, not cleaning
[2026-01-09 07:46:06] 2026-01-09 06:46:06,532 [wrapper] apfmon messages muted
[2026-01-09 07:46:06] 2026-01-09 06:46:06,535 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:46:06] 2026-01-09 06:46:06,539 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:46:06]  *** Error codes and diagnostics ***
[2026-01-09 07:46:06]     "exeErrorCode": 0,
[2026-01-09 07:46:06]     "exeErrorDiag": "",
[2026-01-09 07:46:06]     "pilotErrorCode": 0,
[2026-01-09 07:46:06]     "pilotErrorDiag": "",
[2026-01-09 07:46:06]  *** Listing of results directory ***
[2026-01-09 07:46:06] total 444836
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 07:46:06] -rwx------. 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc       100 Jan  9 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:46:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 03:55 run_atlas
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc       105 Jan  9 03:55 job.xml
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc      6389 Jan  9 03:55 init_data.xml
[2026-01-09 07:46:06] -rw-r--r--. 2 boinc boinc 226181615 Jan  9 03:55 EVNT.47898824._000986.pool.root.1
[2026-01-09 07:46:06] -rw-r--r--. 2 boinc boinc     15847 Jan  9 03:55 start_atlas.sh
[2026-01-09 07:46:06] drwxrwx--x. 2 boinc boinc        68 Jan  9 03:55 shared
[2026-01-09 07:46:06] -rw-r--r--. 2 boinc boinc    592401 Jan  9 03:55 input.tar.gz
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc         0 Jan  9 03:55 boinc_lockfile
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc      2519 Jan  9 03:56 pandaJob.out
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc    989763 Jan  9 04:00 agis_schedconf.cvmfs.json
[2026-01-09 07:46:06] drwx------. 5 boinc boinc      4096 Jan  9 04:00 pilot3
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc 220965710 Jan  9 07:44 HITS.47898826._025039.pool.root.1
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc       531 Jan  9 07:44 boinc_task_state.xml
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc      1011 Jan  9 07:44 memory_monitor_summary.json
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc   1516240 Jan  9 07:45 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc    444070 Jan  9 07:45 log.47898826._025039.job.log.tgz.1
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc        95 Jan  9 07:45 pilot_heartbeat.json
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc      7778 Jan  9 07:45 heartbeat.json
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc      8192 Jan  9 07:45 boinc_mmap_file
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc        28 Jan  9 07:45 wrapper_checkpoint.txt
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc      4881 Jan  9 07:46 pilotlog.txt
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc   1786853 Jan  9 07:46 log.47898826._025039.job.log.1
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc       357 Jan  9 07:46 output.list
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc       620 Jan  9 07:46 runtime_log
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc   2252800 Jan  9 07:46 result.tar.gz
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc      8817 Jan  9 07:46 runtime_log.err
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc       657 Jan  9 07:46 rffNDmv52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3RkKDmUO90Eo.diag
[2026-01-09 07:46:06] -rw-r--r--. 1 boinc boinc     20751 Jan  9 07:46 stderr.txt
[2026-01-09 07:46:06] HITS file was successfully produced:
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc 220965710 Jan  9 07:44 shared/HITS.pool.root.1
[2026-01-09 07:46:06]  *** Contents of shared directory: ***
[2026-01-09 07:46:06] total 439468
[2026-01-09 07:46:06] -rw-r--r--. 2 boinc boinc 226181615 Jan  9 03:55 ATLAS.root_0
[2026-01-09 07:46:06] -rw-r--r--. 2 boinc boinc     15847 Jan  9 03:55 start_atlas.sh
[2026-01-09 07:46:06] -rw-r--r--. 2 boinc boinc    592401 Jan  9 03:55 input.tar.gz
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc 220965710 Jan  9 07:44 HITS.pool.root.1
[2026-01-09 07:46:06] -rw-------. 1 boinc boinc   2252800 Jan  9 07:46 result.tar.gz
07:46:08 (14843): run_atlas exited; CPU time 74812.116783
07:46:08 (14843): called boinc_finish(0)

</stderr_txt>
]]>

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