Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 15:26:33 (41034): vboxwrapper version 26210
2026-01-08 15:26:33 (41034): BOINC client version: 8.2.8
2026-01-08 15:26:34 (41034): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-08 15:26:34 (41034): Detected: Sandbox Configuration Enabled
2026-01-08 15:26:34 (41034): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 15:26:34 (41034): Create VM. (boinc_9f608221dd7bac55, slot#1)
2026-01-08 15:26:34 (41034): Setting Memory Size for VM. (4200MB)
2026-01-08 15:26:34 (41034): Setting CPU Count for VM. (2)
2026-01-08 15:26:34 (41034): Setting Chipset Options for VM.
2026-01-08 15:26:34 (41034): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 15:26:34 (41034): Setting Boot Options for VM.
2026-01-08 15:26:34 (41034): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 15:26:34 (41034): Enabling VM Network Access.
2026-01-08 15:26:34 (41034): Disabling USB Support for VM.
2026-01-08 15:26:34 (41034): Disabling COM Port Support for VM.
2026-01-08 15:26:34 (41034): Disabling Audio Support for VM.
2026-01-08 15:26:34 (41034): Disabling Clipboard Support for VM.
2026-01-08 15:26:34 (41034): Disabling Drag and Drop Support for VM.
2026-01-08 15:26:34 (41034): Adding storage controller(s) to VM.
2026-01-08 15:26:34 (41034): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 15:26:35 (41034): Adding VirtualBox Guest Additions to VM.
2026-01-08 15:26:35 (41034): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 15:26:35 (41034): forwarding host port 53351 to guest port 80
2026-01-08 15:26:35 (41034): Enabling remote desktop for VM.
2026-01-08 15:26:35 (41034): Enabling shared directory for VM.
2026-01-08 15:26:35 (41034): Starting VM using VBoxManage interface. (boinc_9f608221dd7bac55, slot#1)
2026-01-08 15:26:39 (41034): Successfully started VM. (PID = '41109')
2026-01-08 15:26:39 (41034): Reporting VM Process ID to BOINC.
2026-01-08 15:26:39 (41034): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-08 15:26:39 (41034): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 15:26:39 (41034): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 15:26:39 (41034): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 15:26:39 (41034): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 15:26:39 (41034): Detected: Web Application Enabled (http://localhost:53351)
2026-01-08 15:26:39 (41034): Detected: Remote Desktop Enabled (localhost:53352)
2026-01-08 15:26:39 (41034): Preference change detected
2026-01-08 15:26:39 (41034): Setting CPU throttle for VM. (100%)
2026-01-08 15:26:39 (41034): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 15:26:43 (41034): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 15:26:43 (41034): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 15:26:47 (41034): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 15:26:47 (41034): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 15:26:47 (41034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 15:27:00 (41034): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 15:27:01 (41034): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 15:27:13 (41034): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.000195 main     Log opened 2026-01-08T20:27:11.600942000Z
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.000345 main     OS Product: Linux
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.000422 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.000488 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.000556 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.000565 main     Process ID: 1266
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.000566 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 15:27:13 (41034): Guest Log: 00:00:00.002896 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 15:27:13 (41034): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 15:27:13 (41034): Guest Log: [INFO] Mounting shared directory
2026-01-08 15:27:13 (41034): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 15:27:24 (41034): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 15:27:24 (41034): Guest Log: [INFO] Detected branch: prod
2026-01-08 15:27:24 (41034): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 15:27:24 (41034): Guest Log: Copying input files
2026-01-08 15:27:27 (41034): Guest Log: Copied input files into RunAtlas.
2026-01-08 15:27:27 (41034): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-08 15:27:27 (41034): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-08 15:27:27 (41034): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-08 15:27:27 (41034): Guest Log: Further information can be found at the LHC@home message board.
2026-01-08 15:27:39 (41034): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 15:27:39 (41034): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 15:27:39 (41034): Guest Log: 2.6.3.0 1542 0 30064 154919 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-08 15:27:40 (41034): Guest Log: copied the webapp to /var/www
2026-01-08 15:27:40 (41034): Guest Log: ATHENA_PROC_NUMBER=2
2026-01-08 15:27:40 (41034): Guest Log: ATHENA_CORE_NUMBER=2
2026-01-08 15:27:40 (41034): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 15:27:40 (41034): Guest Log:  *** Starting ATLAS job. (PandaID=6963078128 taskID=47898826) ***
2026-01-08 17:06:39 (41034): Status Report: Elapsed Time: '6000.000000'
2026-01-08 17:06:39 (41034): Status Report: CPU Time: '11576.650000'
2026-01-08 18:46:39 (41034): Status Report: Elapsed Time: '12000.000000'
2026-01-08 18:46:39 (41034): Status Report: CPU Time: '23534.610000'
2026-01-08 20:26:39 (41034): Status Report: Elapsed Time: '18000.000000'
2026-01-08 20:26:39 (41034): Status Report: CPU Time: '35481.490000'
2026-01-08 22:06:39 (41034): Status Report: Elapsed Time: '24000.000000'
2026-01-08 22:06:39 (41034): Status Report: CPU Time: '47229.380000'
2026-01-08 23:46:38 (41034): Status Report: Elapsed Time: '30000.000000'
2026-01-08 23:46:38 (41034): Status Report: CPU Time: '58548.330000'
2026-01-09 01:26:38 (41034): Status Report: Elapsed Time: '36000.000000'
2026-01-09 01:26:38 (41034): Status Report: CPU Time: '69877.810000'
2026-01-09 03:06:38 (41034): Status Report: Elapsed Time: '42000.000000'
2026-01-09 03:06:38 (41034): Status Report: CPU Time: '81212.550000'
2026-01-09 03:34:57 (41034): Guest Log:  *** Job finished ***
2026-01-09 03:34:57 (41034): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:24,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:46,446 | INFO     | [monitor] cgroup control has ended
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:46,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050704099136)>', '<ExcThread(monitor, started 140049890932480)>']
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:47,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:47,245 | INFO     | [monitor] control thread has ended
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:51,939 | INFO     | all workflow threads have been joined
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:51,940 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:51,940 | INFO     | traces error code: 0
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:51,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:52,165 [wrapper] ==== pilot stdout END ====
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:52,178 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:52,193 [wrapper] pilotpid: 5920
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:32:52,206 [wrapper] Pilot exit status: 0
2026-01-09 03:34:57 (41034): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:34:38,274 [wrapper] pandaids: 
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:34:38,345 [wrapper] cleanup supervisor_pilot 21334 5921
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:34:38,359 [wrapper] Test setup, not cleaning
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:34:38,370 [wrapper] apfmon messages muted
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:34:38,380 [wrapper] ==== wrapper stdout END ====
2026-01-09 03:34:57 (41034): Guest Log: 2026-01-09 08:34:38,389 [wrapper] ==== wrapper stderr END ====
2026-01-09 03:34:57 (41034): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 03:34:57 (41034): Guest Log:     "exeErrorCode": 0,
2026-01-09 03:34:57 (41034): Guest Log:     "exeErrorDiag": "",
2026-01-09 03:34:57 (41034): Guest Log:     "pilotErrorCode": 0,
2026-01-09 03:34:57 (41034): Guest Log:     "pilotErrorDiag": "",
2026-01-09 03:34:57 (41034): Guest Log:  *** Listing of results directory ***
2026-01-09 03:34:57 (41034): Guest Log: total 231640
2026-01-09 03:34:57 (41034): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 11:09 pilot3.tar.gz
2026-01-09 03:34:57 (41034): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 11:10 runpilot2-wrapper.sh
2026-01-09 03:34:57 (41034): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 11:14 queuedata.json
2026-01-09 03:34:57 (41034): Guest Log: -rw-r-----. 1 atlas atlas     15847 Jan  8 20:27 start_atlas.sh
2026-01-09 03:34:57 (41034): Guest Log: -rw-r-----. 1 atlas atlas    592403 Jan  8 20:27 input.tar.gz
2026-01-09 03:34:57 (41034): Guest Log: -rw-r--r--. 1 atlas atlas      8260 Jan  8 20:27 init_data.xml
2026-01-09 03:34:57 (41034): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 20:27 EVNT.47898824._001001.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 03:34:57 (41034): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan  8 20:27 pandaJob.out
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas    989845 Jan  8 20:28 agis_schedconf.cvmfs.json
2026-01-09 03:34:57 (41034): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 20:28 pilot3
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas 221369059 Jan  9 08:30 HITS.47898826._024505.pool.root.1
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas      1028 Jan  9 08:31 memory_monitor_summary.json
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 08:31 agis_ddmendpoints.agis.ALL.json
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas    709602 Jan  9 08:31 log.47898826._024505.job.log.tgz.1
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas        95 Jan  9 08:31 pilot_heartbeat.json
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas      7816 Jan  9 08:31 heartbeat.json
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas      4877 Jan  9 08:32 pilotlog.txt
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas   5281768 Jan  9 08:34 log.47898826._024505.job.log.1
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 08:34 output.list
2026-01-09 03:34:57 (41034): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 08:34 runtime_log
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas   6010880 Jan  9 08:34 result.tar.gz
2026-01-09 03:34:57 (41034): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Jan  9 08:34 runtime_log.err
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas       664 Jan  9 08:34 7sWNDmh52x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuBfKDmqJK8qn.diag
2026-01-09 03:34:57 (41034): Guest Log: Looking for outputfile HITS.47898826._024505.pool.root.1
2026-01-09 03:34:57 (41034): Guest Log: HITS file was successfully produced
2026-01-09 03:34:57 (41034): Guest Log: -rw-------. 1 atlas atlas 221369059 Jan  9 08:30 /home/atlas/RunAtlas/HITS.47898826._024505.pool.root.1
2026-01-09 03:34:57 (41034): Guest Log: Successfully finished the ATLAS job!
2026-01-09 03:34:57 (41034): Guest Log: Copying the results back to the shared directory!
2026-01-09 03:34:57 (41034): Guest Log:  *** Contents of shared directory: ***
2026-01-09 03:34:57 (41034): Guest Log: total 226628
2026-01-09 03:34:57 (41034): Guest Log: -rw-rw----. 1 root root 225430513 Jan  8 20:26 ATLAS.root_0
2026-01-09 03:34:57 (41034): Guest Log: -rw-rw-r--. 1 root root      8260 Jan  8 20:26 init_data.xml
2026-01-09 03:34:57 (41034): Guest Log: -rw-rw----. 1 root root    592403 Jan  8 20:26 input.tar.gz
2026-01-09 03:34:57 (41034): Guest Log: -rw-r--r--. 1 root root   6010880 Jan  9  2026 result.tar.gz
2026-01-09 03:34:57 (41034): Guest Log: -rw-rw----. 1 root root     15847 Jan  8 20:26 start_atlas.sh
2026-01-09 03:34:57 (41034): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 03:34:57 (41034): VM Completion File Detected.
2026-01-09 03:34:57 (41034): Powering off VM.
2026-01-09 03:34:57 (41034): Successfully stopped VM.
2026-01-09 03:34:57 (41034): Deregistering VM. (boinc_9f608221dd7bac55, slot#1)
2026-01-09 03:34:57 (41034): Removing network bandwidth throttle group from VM.
2026-01-09 03:34:58 (41034): Removing VM from VirtualBox.
2026-01-09 03:35:03 (41034): called boinc_finish(0)

</stderr_txt>
]]>

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