Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:20 (2401648): wrapper (7.7.26015): starting
00:03:20 (2401648): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:03:20] Arguments: --nthreads 12
[2026-01-09 00:03:20] Threads: 12
[2026-01-09 00:03:20] Checking for CVMFS
[2026-01-09 00:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:03:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:03:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:03:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:03:24] 2.13.3.0 9278 92920 382288 154931 1 556 29184263 32935937 21153 16776704 0 454112436 99.752 306376663 33398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 00:03:24] CVMFS is ok
[2026-01-09 00:03:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:03:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:03:24] Further information can be found at the LHC@home message board.
[2026-01-09 00:03:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:03:24] Checking for apptainer binary...
[2026-01-09 00:03:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:03:24] Running /usr/bin/apptainer --version
[2026-01-09 00:03:26] apptainer version 1.4.5-2.el9
[2026-01-09 00:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:03:27] c-4-40.aglt2.org
[2026-01-09 00:03:27] apptainer works
[2026-01-09 00:03:27] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:03:27] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:03:27] Starting ATLAS job with PandaID=6963078486
[2026-01-09 00:03:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:27:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:27:48] 2026-01-09 18:26:54,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:27:48] 2026-01-09 18:26:54,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:27:48] 2026-01-09 18:26:54,576 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:27:48] 2026-01-09 18:26:54,578 | INFO     | sum of square deviations: 150559596403.83212
[2026-01-09 13:27:48] 2026-01-09 18:26:54,592 | INFO     | sum of deviations: 684905029866.6185
[2026-01-09 13:27:48] 2026-01-09 18:26:54,592 | INFO     | mean x: 1767959234.832061
[2026-01-09 13:27:48] 2026-01-09 18:26:54,592 | INFO     | mean y: 2654326.951653944
[2026-01-09 13:27:48] 2026-01-09 18:26:54,592 | INFO     | intersect: -8039902915.881104
[2026-01-09 13:27:48] 2026-01-09 18:26:54,594 | INFO     | chi2: 5.526428257083716
[2026-01-09 13:27:48] 2026-01-09 18:26:54,595 | INFO     | sum of square deviations: 147704634287.4032
[2026-01-09 13:27:48] 2026-01-09 18:26:54,608 | INFO     | sum of deviations: 733231883490.5262
[2026-01-09 13:27:48] 2026-01-09 18:26:54,609 | INFO     | mean x: 1767959082.340589
[2026-01-09 13:27:48] 2026-01-09 18:26:54,609 | INFO     | mean y: 2656893.3777208705
[2026-01-09 13:27:48] 2026-01-09 18:26:54,609 | INFO     | intersect: -8773804144.103266
[2026-01-09 13:27:48] 2026-01-09 18:26:54,610 | INFO     | chi2: 4.824146511118799
[2026-01-09 13:27:48] 2026-01-09 18:26:54,610 | INFO     | current chi2=4.824146511118799 (change=12.707696785256198 %)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,610 | INFO     | right removable region: 780
[2026-01-09 13:27:48] 2026-01-09 18:26:54,611 | INFO     | sum of square deviations: 147704043321.0832
[2026-01-09 13:27:48] 2026-01-09 18:26:54,625 | INFO     | sum of deviations: 423333557412.2227
[2026-01-09 13:27:48] 2026-01-09 18:26:54,625 | INFO     | mean x: 1767959387.3393085
[2026-01-09 13:27:48] 2026-01-09 18:26:54,625 | INFO     | mean y: 2668289.52368758
[2026-01-09 13:27:48] 2026-01-09 18:26:54,626 | INFO     | intersect: -5064468127.153214
[2026-01-09 13:27:48] 2026-01-09 18:26:54,627 | INFO     | chi2: 2.0206749122015517
[2026-01-09 13:27:48] 2026-01-09 18:26:54,627 | INFO     | current chi2=2.0206749122015517 (change=63.436150471844584 %)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,628 | INFO     | sum of square deviations: 144884864509.44327
[2026-01-09 13:27:48] 2026-01-09 18:26:54,641 | INFO     | sum of deviations: 302548986072.9071
[2026-01-09 13:27:48] 2026-01-09 18:26:54,642 | INFO     | mean x: 1767959539.8453608
[2026-01-09 13:27:48] 2026-01-09 18:26:54,642 | INFO     | mean y: 2674819.474226804
[2026-01-09 13:27:48] 2026-01-09 18:26:54,642 | INFO     | intersect: -3689183319.1188083
[2026-01-09 13:27:48] 2026-01-09 18:26:54,643 | INFO     | chi2: 1.2925160642636015
[2026-01-09 13:27:48] 2026-01-09 18:26:54,643 | INFO     | current chi2=1.2925160642636015 (change=36.0354277445159 %)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,644 | INFO     | sum of square deviations: 142101731816.04138
[2026-01-09 13:27:48] 2026-01-09 18:26:54,657 | INFO     | sum of deviations: 212244011028.99347
[2026-01-09 13:27:48] 2026-01-09 18:26:54,658 | INFO     | mean x: 1767959692.3527887
[2026-01-09 13:27:48] 2026-01-09 18:26:54,658 | INFO     | mean y: 2679766.4448767835
[2026-01-09 13:27:48] 2026-01-09 18:26:54,658 | INFO     | intersect: -2637955584.349502
[2026-01-09 13:27:48] 2026-01-09 18:26:54,659 | INFO     | chi2: 0.9131823252436938
[2026-01-09 13:27:48] 2026-01-09 18:26:54,659 | INFO     | current chi2=0.9131823252436938 (change=29.34847384167944 %)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,660 | INFO     | sum of square deviations: 139354648508.91525
[2026-01-09 13:27:48] 2026-01-09 18:26:54,674 | INFO     | sum of deviations: 154227294658.6408
[2026-01-09 13:27:48] 2026-01-09 18:26:54,674 | INFO     | mean x: 1767959844.8550913
[2026-01-09 13:27:48] 2026-01-09 18:26:54,674 | INFO     | mean y: 2682986.77154047
[2026-01-09 13:27:48] 2026-01-09 18:26:54,674 | INFO     | intersect: -1953962642.5966616
[2026-01-09 13:27:48] 2026-01-09 18:26:54,675 | INFO     | chi2: 0.7615030286177915
[2026-01-09 13:27:48] 2026-01-09 18:26:54,675 | INFO     | current chi2=0.7615030286177915 (change=16.60996850606201 %)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,676 | INFO     | left removable region: 40
[2026-01-09 13:27:48] 2026-01-09 18:26:54,677 | INFO     | sum of square deviations: 125641512548.26495
[2026-01-09 13:27:48] 2026-01-09 18:26:54,689 | INFO     | sum of deviations: 166716666939.17014
[2026-01-09 13:27:48] 2026-01-09 18:26:54,689 | INFO     | mean x: 1767960271.8135135
[2026-01-09 13:27:48] 2026-01-09 18:26:54,690 | INFO     | mean y: 2687932.522972973
[2026-01-09 13:27:48] 2026-01-09 18:26:54,690 | INFO     | intersect: -2343259977.6821923
[2026-01-09 13:27:48] 2026-01-09 18:26:54,691 | INFO     | chi2: 0.012000659329291601
[2026-01-09 13:27:48] 2026-01-09 18:26:54,691 | INFO     | current memory leak: 1.33 B/s (using 740 data points, chi2=0.01)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,692 | INFO     | could have reported an average CPU frequency of 2599 MHz (29 samples)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,692 | INFO     | ..............................
[2026-01-09 13:27:48] 2026-01-09 18:26:54,692 | INFO     | . Timing measurements:
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | . get job = 1 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | . initial setup = 10 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | . payload setup = 55 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | . stage-in = 0 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | . payload execution = 47953 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | . stage-out = 2 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | . log creation = 0 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,693 | INFO     | ..............................
[2026-01-09 13:27:48] 2026-01-09 18:26:54,799 | INFO     | 
[2026-01-09 13:27:48] 2026-01-09 18:26:54,799 | INFO     | job summary report
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | --------------------------------------------------
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | PanDA job id: 6963078486
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | task id: 47898826
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | errors: (none)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | pilot state: finished 
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | transexitcode: 0
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | exeerrorcode: 0
[2026-01-09 13:27:48] 2026-01-09 18:26:54,800 | INFO     | exeerrordiag: 
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | exitcode: 0
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | exitmsg: OK
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | cpuconsumptiontime: 69183 s
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | nevents: 400
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | neventsw: 0
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | pid: 2443867
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | pgrp: 2443867
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | corecount: 12
[2026-01-09 13:27:48] 2026-01-09 18:26:54,801 | INFO     | event service: False
[2026-01-09 13:27:48] 2026-01-09 18:26:54,802 | INFO     | sizes: {0: 2283141, 1: 2283742, 2: 2283854, 3: 2283854, 4: 2284081, 15: 2284081, 26: 2284237, 37: 2284265, 40: 2284555, 49: 2284583, 48013: 2329953, 48017: 2338951
[2026-01-09 13:27:48] 2026-01-09 18:26:54,802 | INFO     | --------------------------------------------------
[2026-01-09 13:27:48] 2026-01-09 18:26:54,802 | INFO     | 
[2026-01-09 13:27:48] 2026-01-09 18:26:54,802 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 13:27:48] 2026-01-09 18:26:54,823 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,825 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:27:48] 2026-01-09 18:26:54,826 | INFO     | job 6963078486 has completed (purged errors)
[2026-01-09 13:27:48] 2026-01-09 18:26:54,826 | INFO     | overall cleanup function is called
[2026-01-09 13:27:48] 2026-01-09 18:26:55,834 | INFO     | --- collectZombieJob: --- 10, [2443867]
[2026-01-09 13:27:48] 2026-01-09 18:26:55,834 | INFO     | zombie collector waiting for pid 2443867
[2026-01-09 13:27:48] 2026-01-09 18:26:55,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:27:48] 2026-01-09 18:26:55,834 | INFO     | collected zombie processes
[2026-01-09 13:27:48] 2026-01-09 18:26:55,834 | INFO     | will attempt to kill all subprocesses of pid=2443867
[2026-01-09 13:27:48] 2026-01-09 18:26:56,226 | INFO     | process IDs to be killed: [2443867] (in reverse order)
[2026-01-09 13:27:48] 2026-01-09 18:26:56,340 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:27:48] 2026-01-09 18:26:56,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:27:48] 2026-01-09 18:26:56,356 | INFO     | did not find any defunct processes belonging to 2443867
[2026-01-09 13:27:48] 2026-01-09 18:26:56,371 | INFO     | did not find any defunct processes belonging to 2443867
[2026-01-09 13:27:48] 2026-01-09 18:26:56,372 | INFO     | ready for new job
[2026-01-09 13:27:48] 2026-01-09 18:26:56,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:27:48] 2026-01-09 18:26:56,376 | INFO     | ***************************************
[2026-01-09 13:27:48] 2026-01-09 18:26:56,376 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:27:48] 2026-01-09 18:26:56,376 | INFO     | ***************************************
[2026-01-09 13:27:48] 2026-01-09 18:26:56,376 | INFO     | 
[2026-01-09 13:27:48] 2026-01-09 18:26:56,378 | INFO     | architecture information:
[2026-01-09 13:27:48] 2026-01-09 18:26:56,379 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:27:48] 2026-01-09 18:26:56,395 | INFO     | cat /etc/os-release:
[2026-01-09 13:27:48] NAME="CentOS Linux"
[2026-01-09 13:27:48] VERSION="7 (Core)"
[2026-01-09 13:27:48] ID="centos"
[2026-01-09 13:27:48] ID_LIKE="rhel fedora"
[2026-01-09 13:27:48] VERSION_ID="7"
[2026-01-09 13:27:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:27:48] ANSI_COLOR="0;31"
[2026-01-09 13:27:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:27:48] HOME_URL="https://www.centos.org/"
[2026-01-09 13:27:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:27:48] 
[2026-01-09 13:27:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:27:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:27:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:27:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:27:48] 
[2026-01-09 13:27:48] 2026-01-09 18:26:56,396 | INFO     | ***************************************
[2026-01-09 13:27:48] 2026-01-09 18:26:56,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 13:27:48] 2026-01-09 18:26:56,916 | INFO     | sufficient remaining disk space (75562483712 B)
[2026-01-09 13:27:48] 2026-01-09 18:26:56,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:27:48] 2026-01-09 18:26:56,916 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:27:48] 2026-01-09 18:26:56,917 | INFO     | update_server=False
[2026-01-09 13:27:48] 2026-01-09 18:26:56,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:27:48] 2026-01-09 18:26:56,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:27:48] 2026-01-09 18:26:56,917 | INFO     | aborting loop
[2026-01-09 13:27:48] 2026-01-09 18:26:57,090 | INFO     | all payload control threads have been joined
[2026-01-09 13:27:48] 2026-01-09 18:26:57,128 | INFO     | all data control threads have been joined
[2026-01-09 13:27:48] 2026-01-09 18:26:57,198 | INFO     | all job control threads have been joined
[2026-01-09 13:27:48] 2026-01-09 18:26:57,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:27:48] 2026-01-09 18:26:57,921 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:57,922 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:58,095 | INFO     | [payload] control thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:58,133 | INFO     | [data] control thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:58,204 | INFO     | [job] control thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:58,260 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:58,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:27:48] 2026-01-09 18:26:58,794 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:58,958 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:59,298 | INFO     | [job] validate thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:59,299 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:59,301 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:59,330 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:59,605 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:26:59,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:27:48] 2026-01-09 18:27:00,819 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:27:02,368 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:27:07,569 | INFO     | job.realtimelogging is not enabled
[2026-01-09 13:27:48] 2026-01-09 18:27:08,574 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:27:48] 2026-01-09 18:27:26,897 | INFO     | PID=2413920 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 13:27:48] 2026-01-09 18:27:26,898 | INFO     | .. there are 27 such processes running
[2026-01-09 13:27:48] 2026-01-09 18:27:26,899 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:27:48] 2026-01-09 18:27:26,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:27:48] 2026-01-09 18:27:26,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:27:48] 2026-01-09 18:27:41,821 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:27:48] 2026-01-09 18:27:42,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756969711424)>', '<ExcThread(monitor, started 139755811497728)>']
[2026-01-09 13:27:48] 2026-01-09 18:27:42,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:27:48] 2026-01-09 18:27:42,983 | INFO     | [monitor] control thread has ended
[2026-01-09 13:27:48] 2026-01-09 18:27:47,828 | INFO     | all workflow threads have been joined
[2026-01-09 13:27:48] 2026-01-09 18:27:47,828 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:27:48] 2026-01-09 18:27:47,829 | INFO     | traces error code: 0
[2026-01-09 13:27:48] 2026-01-09 18:27:47,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:27:48] 2026-01-09 18:27:47,974 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:27:48] 2026-01-09 18:27:47,978 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:27:48] 2026-01-09 18:27:47,981 [wrapper] pilotpid: 2413920
[2026-01-09 13:27:48] 2026-01-09 18:27:47,984 [wrapper] Pilot exit status: 0
[2026-01-09 13:27:48] 2026-01-09 18:27:47,995 [wrapper] pandaids: 6963078486
[2026-01-09 13:27:48] 2026-01-09 18:27:48,068 [wrapper] cleanup supervisor_pilot 1295992 2413921
[2026-01-09 13:27:48] 2026-01-09 18:27:48,072 [wrapper] Test setup, not cleaning
[2026-01-09 13:27:48] 2026-01-09 18:27:48,075 [wrapper] apfmon messages muted
[2026-01-09 13:27:48] 2026-01-09 18:27:48,078 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:27:48] 2026-01-09 18:27:48,081 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:27:48]  *** Error codes and diagnostics ***
[2026-01-09 13:27:48]     "exeErrorCode": 0,
[2026-01-09 13:27:48]     "exeErrorDiag": "",
[2026-01-09 13:27:48]     "pilotErrorCode": 0,
[2026-01-09 13:27:48]     "pilotErrorDiag": "",
[2026-01-09 13:27:48]  *** Listing of results directory ***
[2026-01-09 13:27:48] total 446592
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-09 13:27:48] -rwx------. 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:14 queuedata.json
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas       100 Jan  9 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:27:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 00:03 run_atlas
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas       105 Jan  9 00:03 job.xml
[2026-01-09 13:27:48] -rw-r--r--. 2 boincer umatlas 226027152 Jan  9 00:03 EVNT.47898824._000970.pool.root.1
[2026-01-09 13:27:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 13:27:48] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 00:03 shared
[2026-01-09 13:27:48] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 00:03 input.tar.gz
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas         0 Jan  9 00:03 boinc_lockfile
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 00:03 pandaJob.out
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas        57 Jan  9 00:03 setup.sh.local
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas    989771 Jan  9 00:04 agis_schedconf.cvmfs.json
[2026-01-09 13:27:48] drwx------. 5 boincer umatlas      4096 Jan  9 00:05 pilot3
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas      6658 Jan  9 13:20 init_data.xml
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas 215132158 Jan  9 13:25 HITS.47898826._024645.pool.root.1
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas       531 Jan  9 13:26 boinc_task_state.xml
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas      1046 Jan  9 13:26 memory_monitor_summary.json
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas   1516240 Jan  9 13:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas    903366 Jan  9 13:26 log.47898826._024645.job.log.tgz.1
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas      7829 Jan  9 13:26 heartbeat.json
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas        95 Jan  9 13:27 pilot_heartbeat.json
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas        28 Jan  9 13:27 wrapper_checkpoint.txt
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 13:27 boinc_mmap_file
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas      4896 Jan  9 13:27 pilotlog.txt
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas   5215373 Jan  9 13:27 log.47898826._024645.job.log.1
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas       357 Jan  9 13:27 output.list
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas       620 Jan  9 13:27 runtime_log
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas   6133760 Jan  9 13:27 result.tar.gz
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas      9335 Jan  9 13:27 runtime_log.err
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas       656 Jan  9 13:27 FCgMDmi52x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsCfKDmSwFtEm.diag
[2026-01-09 13:27:48] -rw-r--r--. 1 boincer umatlas     21046 Jan  9 13:27 stderr.txt
[2026-01-09 13:27:48] HITS file was successfully produced:
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas 215132158 Jan  9 13:25 shared/HITS.pool.root.1
[2026-01-09 13:27:48]  *** Contents of shared directory: ***
[2026-01-09 13:27:48] total 437416
[2026-01-09 13:27:48] -rw-r--r--. 2 boincer umatlas 226027152 Jan  9 00:03 ATLAS.root_0
[2026-01-09 13:27:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 00:03 start_atlas.sh
[2026-01-09 13:27:48] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 00:03 input.tar.gz
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas 215132158 Jan  9 13:25 HITS.pool.root.1
[2026-01-09 13:27:48] -rw-------. 1 boincer umatlas   6133760 Jan  9 13:27 result.tar.gz
13:27:50 (2401648): run_atlas exited; CPU time 70808.944811
13:27:50 (2401648): called boinc_finish(0)

</stderr_txt>
]]>

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