Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:16:03 (12275): wrapper (7.7.26015): starting
15:16:03 (12275): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 15:16:03] Arguments: --nthreads 8
[2026-01-08 15:16:03] Threads: 8
[2026-01-08 15:16:03] Checking for CVMFS
[2026-01-08 15:16:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:16:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:16:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:16:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:16:03] 2.11.2.0 2893 128101 81608 154919 1 56 17865592 20275200 1 130560 0 31633172 99.820 8173056 33224 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 15:16:03] CVMFS is ok
[2026-01-08 15:16:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 15:16:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 15:16:03] Further information can be found at the LHC@home message board.
[2026-01-08 15:16:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:16:03] Checking for apptainer binary...
[2026-01-08 15:16:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 15:16:03] Running /usr/bin/apptainer --version
[2026-01-08 15:16:04] apptainer version 1.3.2-1.el7
[2026-01-08 15:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:16:05] c-204-22.aglt2.org
[2026-01-08 15:16:05] apptainer works
[2026-01-08 15:16:05] Set ATHENA_PROC_NUMBER=8
[2026-01-08 15:16:05] Set ATHENA_CORE_NUMBER=8
[2026-01-08 15:16:05] Starting ATLAS job with PandaID=6963078644
[2026-01-08 15:16:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:19:46]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:19:46] 2026-01-08 23:19:05,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 18:19:46] 2026-01-08 23:19:06,276 | INFO     | PID=16028 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:19:46] 2026-01-08 23:19:07,276 | INFO     | time since job start (10965s) is within the limit (174528.0s)
[2026-01-08 18:19:46] 2026-01-08 23:19:07,820 | INFO     | monitor loop #808: job 0:6963078644 is in state 'finished'
[2026-01-08 18:19:46] 2026-01-08 23:19:07,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 18:19:46] 2026-01-08 23:19:09,281 | INFO     | time since job start (10967s) is within the limit (174528.0s)
[2026-01-08 18:19:46] 2026-01-08 23:19:10,323 | INFO     | monitor loop #809: job 0:6963078644 is in state 'finished'
[2026-01-08 18:19:46] 2026-01-08 23:19:10,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,286 | INFO     | time since job start (10969s) is within the limit (174528.0s)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,690 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 18:19:46] 2026-01-08 23:19:11,694 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-08 18:19:46] 2026-01-08 23:19:11,695 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963078644/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,696 | INFO     | extracted standard info from prmon json
[2026-01-08 18:19:46] 2026-01-08 23:19:11,696 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:19:46] 2026-01-08 23:19:11,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:19:46] 2026-01-08 23:19:11,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:19:46] 2026-01-08 23:19:11,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:19:46] 2026-01-08 23:19:11,700 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:19:46] 2026-01-08 23:19:11,701 | INFO     | sum of square deviations: 1778377530.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,702 | INFO     | sum of deviations: -21128142633.999996
[2026-01-08 18:19:46] 2026-01-08 23:19:11,702 | INFO     | mean x: 1767908843.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,702 | INFO     | mean y: 2562139.0502793295
[2026-01-08 18:19:46] 2026-01-08 23:19:11,703 | INFO     | intersect: 21006330781.36657
[2026-01-08 18:19:46] 2026-01-08 23:19:11,703 | INFO     | chi2: 1.6667680949212458
[2026-01-08 18:19:46] 2026-01-08 23:19:11,703 | INFO     | sum of square deviations: 1633472487.5
[2026-01-08 18:19:46] 2026-01-08 23:19:11,704 | INFO     | sum of deviations: -19798392959.000004
[2026-01-08 18:19:46] 2026-01-08 23:19:11,705 | INFO     | mean x: 1767908690.5
[2026-01-08 18:19:46] 2026-01-08 23:19:11,705 | INFO     | mean y: 2563538.6551724137
[2026-01-08 18:19:46] 2026-01-08 23:19:11,705 | INFO     | intersect: 21430381416.212242
[2026-01-08 18:19:46] 2026-01-08 23:19:11,705 | INFO     | chi2: 1.6656019246794629
[2026-01-08 18:19:46] 2026-01-08 23:19:11,705 | INFO     | current chi2=1.6656019246794629 (change=0.06996595659205936 %)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,705 | INFO     | right removable region: 173
[2026-01-08 18:19:46] 2026-01-08 23:19:11,706 | INFO     | sum of square deviations: 1633472487.5
[2026-01-08 18:19:46] 2026-01-08 23:19:11,707 | INFO     | sum of deviations: -48661134720.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,707 | INFO     | mean x: 1767908995.5
[2026-01-08 18:19:46] 2026-01-08 23:19:11,707 | INFO     | mean y: 2590748.8505747127
[2026-01-08 18:19:46] 2026-01-08 23:19:11,707 | INFO     | intersect: 52668588162.97928
[2026-01-08 18:19:46] 2026-01-08 23:19:11,708 | INFO     | chi2: 0.1837500876001909
[2026-01-08 18:19:46] 2026-01-08 23:19:11,708 | INFO     | current chi2=0.1837500876001909 (change=88.97566565138307 %)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,708 | INFO     | sum of square deviations: 1496660620.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,709 | INFO     | sum of deviations: -46999986258.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,709 | INFO     | mean x: 1767909148.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,709 | INFO     | mean y: 2588851.076923077
[2026-01-08 18:19:46] 2026-01-08 23:19:11,709 | INFO     | intersect: 55520656575.3366
[2026-01-08 18:19:46] 2026-01-08 23:19:11,710 | INFO     | chi2: 0.1681330484887415
[2026-01-08 18:19:46] 2026-01-08 23:19:11,710 | INFO     | current chi2=0.1681330484887415 (change=8.499064852382242 %)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,710 | INFO     | left removable region: 20
[2026-01-08 18:19:46] 2026-01-08 23:19:11,710 | INFO     | sum of square deviations: 1110539892.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,711 | INFO     | sum of deviations: -35979358306.00002
[2026-01-08 18:19:46] 2026-01-08 23:19:11,711 | INFO     | mean x: 1767909270.0
[2026-01-08 18:19:46] 2026-01-08 23:19:11,711 | INFO     | mean y: 2580151.8169934643
[2026-01-08 18:19:46] 2026-01-08 23:19:11,711 | INFO     | intersect: 57279442996.67637
[2026-01-08 18:19:46] 2026-01-08 23:19:11,712 | INFO     | chi2: 0.16022543291164948
[2026-01-08 18:19:46] 2026-01-08 23:19:11,712 | INFO     | current memory leak: -32.40 B/s (using 153 data points, chi2=0.16)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,712 | INFO     | could have reported an average CPU frequency of 2026 MHz (9 samples)
[2026-01-08 18:19:46] 2026-01-08 23:19:11,712 | INFO     | ..............................
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . Timing measurements:
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . get job = 0 s
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . initial setup = 2 s
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . payload setup = 8 s
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . stage-in = 0 s
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . payload execution = 10924 s
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . stage-out = 2 s
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | . log creation = 0 s
[2026-01-08 18:19:46] 2026-01-08 23:19:11,713 | INFO     | ..............................
[2026-01-08 18:19:46] 2026-01-08 23:19:12,074 | INFO     | 
[2026-01-08 18:19:46] 2026-01-08 23:19:12,074 | INFO     | job summary report
[2026-01-08 18:19:46] 2026-01-08 23:19:12,074 | INFO     | --------------------------------------------------
[2026-01-08 18:19:46] 2026-01-08 23:19:12,075 | INFO     | PanDA job id: 6963078644
[2026-01-08 18:19:46] 2026-01-08 23:19:12,075 | INFO     | task id: 47898826
[2026-01-08 18:19:46] 2026-01-08 23:19:12,075 | INFO     | errors: (none)
[2026-01-08 18:19:46] 2026-01-08 23:19:12,075 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:19:46] 2026-01-08 23:19:12,075 | INFO     | pilot state: finished 
[2026-01-08 18:19:46] 2026-01-08 23:19:12,075 | INFO     | transexitcode: 0
[2026-01-08 18:19:46] 2026-01-08 23:19:12,076 | INFO     | exeerrorcode: 0
[2026-01-08 18:19:46] 2026-01-08 23:19:12,076 | INFO     | exeerrordiag: 
[2026-01-08 18:19:46] 2026-01-08 23:19:12,076 | INFO     | exitcode: 0
[2026-01-08 18:19:46] 2026-01-08 23:19:12,076 | INFO     | exitmsg: OK
[2026-01-08 18:19:46] 2026-01-08 23:19:12,076 | INFO     | cpuconsumptiontime: 82978 s
[2026-01-08 18:19:46] 2026-01-08 23:19:12,076 | INFO     | nevents: 400
[2026-01-08 18:19:46] 2026-01-08 23:19:12,077 | INFO     | neventsw: 0
[2026-01-08 18:19:46] 2026-01-08 23:19:12,077 | INFO     | pid: 22391
[2026-01-08 18:19:46] 2026-01-08 23:19:12,077 | INFO     | pgrp: 22391
[2026-01-08 18:19:46] 2026-01-08 23:19:12,077 | INFO     | corecount: 8
[2026-01-08 18:19:46] 2026-01-08 23:19:12,077 | INFO     | event service: False
[2026-01-08 18:19:46] 2026-01-08 23:19:12,077 | INFO     | sizes: {0: 2283967, 1: 2283967, 6: 2284257, 11: 2284285, 10936: 2313340, 10940: 2322338, 10942: 2322522, 10952: 2322780}
[2026-01-08 18:19:46] 2026-01-08 23:19:12,078 | INFO     | --------------------------------------------------
[2026-01-08 18:19:46] 2026-01-08 23:19:12,078 | INFO     | 
[2026-01-08 18:19:46] 2026-01-08 23:19:12,078 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 18:19:46] 2026-01-08 23:19:12,106 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,107 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,107 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,107 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,110 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:19:46] 2026-01-08 23:19:12,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,110 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:19:46] 2026-01-08 23:19:12,110 | INFO     | job 6963078644 has completed (purged errors)
[2026-01-08 18:19:46] 2026-01-08 23:19:12,110 | INFO     | overall cleanup function is called
[2026-01-08 18:19:46] 2026-01-08 23:19:13,119 | INFO     | --- collectZombieJob: --- 10, [22391]
[2026-01-08 18:19:46] 2026-01-08 23:19:13,119 | INFO     | zombie collector waiting for pid 22391
[2026-01-08 18:19:46] 2026-01-08 23:19:13,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:19:46] 2026-01-08 23:19:13,119 | INFO     | collected zombie processes
[2026-01-08 18:19:46] 2026-01-08 23:19:13,119 | INFO     | will attempt to kill all subprocesses of pid=22391
[2026-01-08 18:19:46] 2026-01-08 23:19:13,208 | INFO     | process IDs to be killed: [22391] (in reverse order)
[2026-01-08 18:19:46] 2026-01-08 23:19:13,263 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:19:46] 2026-01-08 23:19:13,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:19:46] 2026-01-08 23:19:13,268 | INFO     | did not find any defunct processes belonging to 22391
[2026-01-08 18:19:46] 2026-01-08 23:19:13,272 | INFO     | did not find any defunct processes belonging to 22391
[2026-01-08 18:19:46] 2026-01-08 23:19:13,273 | INFO     | ready for new job
[2026-01-08 18:19:46] 2026-01-08 23:19:13,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:19:46] 2026-01-08 23:19:13,275 | INFO     | ***************************************
[2026-01-08 18:19:46] 2026-01-08 23:19:13,275 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:19:46] 2026-01-08 23:19:13,275 | INFO     | ***************************************
[2026-01-08 18:19:46] 2026-01-08 23:19:13,275 | INFO     | 
[2026-01-08 18:19:46] 2026-01-08 23:19:13,276 | INFO     | architecture information:
[2026-01-08 18:19:46] 2026-01-08 23:19:13,276 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:19:46] 2026-01-08 23:19:13,293 | INFO     | cat /etc/os-release:
[2026-01-08 18:19:46] NAME="CentOS Linux"
[2026-01-08 18:19:46] VERSION="7 (Core)"
[2026-01-08 18:19:46] ID="centos"
[2026-01-08 18:19:46] ID_LIKE="rhel fedora"
[2026-01-08 18:19:46] VERSION_ID="7"
[2026-01-08 18:19:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:19:46] ANSI_COLOR="0;31"
[2026-01-08 18:19:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:19:46] HOME_URL="https://www.centos.org/"
[2026-01-08 18:19:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:19:46] 
[2026-01-08 18:19:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:19:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:19:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:19:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:19:46] 
[2026-01-08 18:19:46] 2026-01-08 23:19:13,294 | INFO     | ***************************************
[2026-01-08 18:19:46] 2026-01-08 23:19:13,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 18:19:46] 2026-01-08 23:19:13,817 | INFO     | sufficient remaining disk space (18490589184 B)
[2026-01-08 18:19:46] 2026-01-08 23:19:13,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:19:46] 2026-01-08 23:19:13,817 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:19:46] 2026-01-08 23:19:13,818 | INFO     | update_server=False
[2026-01-08 18:19:46] 2026-01-08 23:19:13,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:19:46] 2026-01-08 23:19:13,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:19:46] 2026-01-08 23:19:13,836 | INFO     | aborting loop
[2026-01-08 18:19:46] 2026-01-08 23:19:14,518 | INFO     | all payload control threads have been joined
[2026-01-08 18:19:46] 2026-01-08 23:19:14,645 | INFO     | all data control threads have been joined
[2026-01-08 18:19:46] 2026-01-08 23:19:14,823 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:14,842 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:14,956 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:15,024 | INFO     | [job] validate thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:15,187 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:15,197 | INFO     | all job control threads have been joined
[2026-01-08 18:19:46] 2026-01-08 23:19:15,251 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:15,253 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:15,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:19:46] 2026-01-08 23:19:15,277 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:15,523 | INFO     | [payload] control thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:15,653 | INFO     | [data] control thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:16,139 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:16,203 | INFO     | [job] control thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:16,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:19:46] 2026-01-08 23:19:16,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:19:46] 2026-01-08 23:19:17,271 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:17,818 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:20,453 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:24,382 | INFO     | job.realtimelogging is not enabled
[2026-01-08 18:19:46] 2026-01-08 23:19:25,387 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:19:46] 2026-01-08 23:19:39,994 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:19:46] 2026-01-08 23:19:41,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247246317376)>', '<ExcThread(monitor, started 140246477940480)>']
[2026-01-08 18:19:46] 2026-01-08 23:19:44,508 | INFO     | PID=16028 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:19:46] 2026-01-08 23:19:44,508 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:19:46] 2026-01-08 23:19:44,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:19:46] 2026-01-08 23:19:44,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:19:46] 2026-01-08 23:19:44,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:19:46] 2026-01-08 23:19:44,509 | INFO     | [monitor] control thread has ended
[2026-01-08 18:19:46] 2026-01-08 23:19:46,359 | INFO     | all workflow threads have been joined
[2026-01-08 18:19:46] 2026-01-08 23:19:46,359 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:19:46] 2026-01-08 23:19:46,360 | INFO     | traces error code: 0
[2026-01-08 18:19:46] 2026-01-08 23:19:46,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:19:46] 2026-01-08 23:19:46,471 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:19:46] 2026-01-08 23:19:46,476 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:19:46] 2026-01-08 23:19:46,480 [wrapper] pilotpid: 16028
[2026-01-08 18:19:46] 2026-01-08 23:19:46,485 [wrapper] Pilot exit status: 0
[2026-01-08 18:19:46] 2026-01-08 23:19:46,504 [wrapper] pandaids: 6963078644
[2026-01-08 18:19:46] 2026-01-08 23:19:46,550 [wrapper] cleanup supervisor_pilot  1791 16029
[2026-01-08 18:19:46] 2026-01-08 23:19:46,554 [wrapper] Test setup, not cleaning
[2026-01-08 18:19:46] 2026-01-08 23:19:46,559 [wrapper] apfmon messages muted
[2026-01-08 18:19:46] 2026-01-08 23:19:46,564 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:19:46] 2026-01-08 23:19:46,568 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:19:46]  *** Error codes and diagnostics ***
[2026-01-08 18:19:46]     "exeErrorCode": 0,
[2026-01-08 18:19:46]     "exeErrorDiag": "",
[2026-01-08 18:19:46]     "pilotErrorCode": 0,
[2026-01-08 18:19:46]     "pilotErrorDiag": "",
[2026-01-08 18:19:46]  *** Listing of results directory ***
[2026-01-08 18:19:46] total 452280
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 18:19:46] -rwx------ 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 06:14 queuedata.json
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas       100 Jan  8 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:19:46] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 15:16 run_atlas
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas       105 Jan  8 15:16 job.xml
[2026-01-08 18:19:46] -rw-r--r-- 2 boincer umatlas 227030324 Jan  8 15:16 EVNT.47898824._000977.pool.root.1
[2026-01-08 18:19:46] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 15:16 start_atlas.sh
[2026-01-08 18:19:46] drwxrwx--x 2 boincer umatlas      4096 Jan  8 15:16 shared
[2026-01-08 18:19:46] -rw-r--r-- 2 boincer umatlas    592400 Jan  8 15:16 input.tar.gz
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas         0 Jan  8 15:16 boinc_lockfile
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 15:16 pandaJob.out
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas        57 Jan  8 15:16 setup.sh.local
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas    989845 Jan  8 15:16 agis_schedconf.cvmfs.json
[2026-01-08 18:19:46] drwx------ 5 boincer umatlas      4096 Jan  8 15:16 pilot3
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas 228354927 Jan  8 18:18 HITS.47898826._024803.pool.root.1
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas       531 Jan  8 18:18 boinc_task_state.xml
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas      1062 Jan  8 18:18 memory_monitor_summary.json
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas   1516240 Jan  8 18:18 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas    401099 Jan  8 18:18 log.47898826._024803.job.log.tgz.1
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas        95 Jan  8 18:19 pilot_heartbeat.json
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas      7848 Jan  8 18:19 heartbeat.json
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas      5910 Jan  8 18:19 init_data.xml
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 18:19 boinc_mmap_file
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas        28 Jan  8 18:19 wrapper_checkpoint.txt
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas      4818 Jan  8 18:19 pilotlog.txt
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas   1518015 Jan  8 18:19 log.47898826._024803.job.log.1
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas       357 Jan  8 18:19 output.list
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas       620 Jan  8 18:19 runtime_log
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas   1935360 Jan  8 18:19 result.tar.gz
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas      9343 Jan  8 18:19 runtime_log.err
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas       663 Jan  8 18:19 0ooNDmj52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcQkKDm8MzB8n.diag
[2026-01-08 18:19:46] -rw-r--r-- 1 boincer umatlas     21403 Jan  8 18:19 stderr.txt
[2026-01-08 18:19:46] HITS file was successfully produced:
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas 228354927 Jan  8 18:18 shared/HITS.pool.root.1
[2026-01-08 18:19:46]  *** Contents of shared directory: ***
[2026-01-08 18:19:46] total 447208
[2026-01-08 18:19:46] -rw-r--r-- 2 boincer umatlas 227030324 Jan  8 15:16 ATLAS.root_0
[2026-01-08 18:19:46] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 15:16 start_atlas.sh
[2026-01-08 18:19:46] -rw-r--r-- 2 boincer umatlas    592400 Jan  8 15:16 input.tar.gz
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas 228354927 Jan  8 18:18 HITS.pool.root.1
[2026-01-08 18:19:46] -rw------- 1 boincer umatlas   1935360 Jan  8 18:19 result.tar.gz
18:19:47 (12275): run_atlas exited; CPU time 82916.810158
18:19:47 (12275): called boinc_finish(0)

</stderr_txt>
]]>

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