Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:16:11 (17077): wrapper (7.7.26015): starting
05:16:11 (17077): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 05:16:11] Arguments: --nthreads 8
[2026-01-09 05:16:11] Threads: 8
[2026-01-09 05:16:11] Checking for CVMFS
[2026-01-09 05:16:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:16:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:16:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:16:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:16:15] 2.11.2.0 7091 34924 97460 154931 3 14 17505515 25165824 96 130560 0 15902919 99.806 9215406 3303 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 05:16:15] CVMFS is ok
[2026-01-09 05:16:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:16:15] Checking for apptainer binary...
[2026-01-09 05:16:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:16:15] Running /usr/bin/apptainer --version
[2026-01-09 05:16:15] apptainer version 1.3.2-1.el7
[2026-01-09 05:16:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:16:33] cg-vwn433.simple-grid.lan
[2026-01-09 05:16:33] apptainer works
[2026-01-09 05:16:33] Set ATHENA_PROC_NUMBER=8
[2026-01-09 05:16:33] Set ATHENA_CORE_NUMBER=8
[2026-01-09 05:16:34] Starting ATLAS job with PandaID=6963076295
[2026-01-09 05:16:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:19:34]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:19:34] 2026-01-09 07:18:49,576 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963076295/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:19:34] 2026-01-09 07:18:49,577 | INFO     | extracted standard info from prmon json
[2026-01-09 08:19:34] 2026-01-09 07:18:49,577 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:19:34] 2026-01-09 07:18:49,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:19:34] 2026-01-09 07:18:49,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:19:34] 2026-01-09 07:18:49,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:19:34] 2026-01-09 07:18:49,582 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:19:34] 2026-01-09 07:18:49,582 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,584 | INFO     | sum of deviations: -18567936522.00001
[2026-01-09 08:19:34] 2026-01-09 07:18:49,584 | INFO     | mean x: 1767938035.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,584 | INFO     | mean y: 2521887.02994012
[2026-01-09 08:19:34] 2026-01-09 07:18:49,584 | INFO     | intersect: 22733515349.759277
[2026-01-09 08:19:34] 2026-01-09 07:18:49,585 | INFO     | chi2: 2.4709634173063626
[2026-01-09 08:19:34] 2026-01-09 07:18:49,585 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 08:19:34] 2026-01-09 07:18:49,586 | INFO     | sum of deviations: -6627276405.499996
[2026-01-09 08:19:34] 2026-01-09 07:18:49,587 | INFO     | mean x: 1767937882.5
[2026-01-09 08:19:34] 2026-01-09 07:18:49,587 | INFO     | mean y: 2536029.549382716
[2026-01-09 08:19:34] 2026-01-09 07:18:49,587 | INFO     | intersect: 8890354320.889088
[2026-01-09 08:19:34] 2026-01-09 07:18:49,587 | INFO     | chi2: 1.7095544156524216
[2026-01-09 08:19:34] 2026-01-09 07:18:49,587 | INFO     | current chi2=1.7095544156524216 (change=30.814256347184827 %)
[2026-01-09 08:19:34] 2026-01-09 07:18:49,588 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,589 | INFO     | sum of deviations: -5995056575.999994
[2026-01-09 08:19:34] 2026-01-09 07:18:49,589 | INFO     | mean x: 1767937730.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,589 | INFO     | mean y: 2536844.6305732485
[2026-01-09 08:19:34] 2026-01-09 07:18:49,589 | INFO     | intersect: 8835379385.792181
[2026-01-09 08:19:34] 2026-01-09 07:18:49,590 | INFO     | chi2: 1.7096735808536747
[2026-01-09 08:19:34] 2026-01-09 07:18:49,590 | INFO     | current chi2=1.7096735808536747 (change=-0.006970541572824086 %)
[2026-01-09 08:19:34] 2026-01-09 07:18:49,590 | INFO     | right removable region: 156
[2026-01-09 08:19:34] 2026-01-09 07:18:49,590 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 08:19:34] 2026-01-09 07:18:49,592 | INFO     | sum of deviations: -44608652546.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,592 | INFO     | mean x: 1767938187.5
[2026-01-09 08:19:34] 2026-01-09 07:18:49,592 | INFO     | mean y: 2553020.592592593
[2026-01-09 08:19:34] 2026-01-09 07:18:49,592 | INFO     | intersect: 59827078540.594345
[2026-01-09 08:19:34] 2026-01-09 07:18:49,592 | INFO     | chi2: 0.9683948861170701
[2026-01-09 08:19:34] 2026-01-09 07:18:49,592 | INFO     | current chi2=0.9683948861170701 (change=60.8090156521729 %)
[2026-01-09 08:19:34] 2026-01-09 07:18:49,593 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,594 | INFO     | sum of deviations: -43772252754.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,594 | INFO     | mean x: 1767938340.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,594 | INFO     | mean y: 2551871.439490446
[2026-01-09 08:19:34] 2026-01-09 07:18:49,594 | INFO     | intersect: 64494612079.47721
[2026-01-09 08:19:34] 2026-01-09 07:18:49,595 | INFO     | chi2: 0.9477737644622892
[2026-01-09 08:19:34] 2026-01-09 07:18:49,595 | INFO     | current chi2=0.9477737644622892 (change=2.1294124897194067 %)
[2026-01-09 08:19:34] 2026-01-09 07:18:49,595 | INFO     | left removable region: 20
[2026-01-09 08:19:34] 2026-01-09 07:18:49,595 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,596 | INFO     | sum of deviations: -21598117927.0
[2026-01-09 08:19:34] 2026-01-09 07:18:49,596 | INFO     | mean x: 1767938309.5
[2026-01-09 08:19:34] 2026-01-09 07:18:49,596 | INFO     | mean y: 2556036.4852941176
[2026-01-09 08:19:34] 2026-01-09 07:18:49,597 | INFO     | intersect: 48959167086.5509
[2026-01-09 08:19:34] 2026-01-09 07:18:49,597 | INFO     | chi2: 0.13950439762974776
[2026-01-09 08:19:34] 2026-01-09 07:18:49,597 | INFO     | current memory leak: -27.69 B/s (using 136 data points, chi2=0.14)
[2026-01-09 08:19:34] 2026-01-09 07:18:49,598 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 08:19:34] 2026-01-09 07:18:49,598 | INFO     | ..............................
[2026-01-09 08:19:34] 2026-01-09 07:18:49,598 | INFO     | . Timing measurements:
[2026-01-09 08:19:34] 2026-01-09 07:18:49,598 | INFO     | . get job = 0 s
[2026-01-09 08:19:34] 2026-01-09 07:18:49,598 | INFO     | . initial setup = 11 s
[2026-01-09 08:19:34] 2026-01-09 07:18:49,598 | INFO     | . payload setup = 165 s
[2026-01-09 08:19:34] 2026-01-09 07:18:49,599 | INFO     | . stage-in = 0 s
[2026-01-09 08:19:34] 2026-01-09 07:18:49,599 | INFO     | . payload execution = 10263 s
[2026-01-09 08:19:34] 2026-01-09 07:18:49,599 | INFO     | . stage-out = 1 s
[2026-01-09 08:19:34] 2026-01-09 07:18:49,599 | INFO     | . log creation = 0 s
[2026-01-09 08:19:34] 2026-01-09 07:18:49,599 | INFO     | ..............................
[2026-01-09 08:19:34] 2026-01-09 07:18:49,847 | INFO     | time since job start (10658s) is within the limit (174528.0s)
[2026-01-09 08:19:34] 2026-01-09 07:18:50,089 | INFO     | 
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | job summary report
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | --------------------------------------------------
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | PanDA job id: 6963076295
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | task id: 47898826
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | errors: (none)
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | pilot state: finished 
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | transexitcode: 0
[2026-01-09 08:19:34] 2026-01-09 07:18:50,090 | INFO     | exeerrorcode: 0
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | exeerrordiag: 
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | exitcode: 0
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | exitmsg: OK
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | cpuconsumptiontime: 76560 s
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | nevents: 400
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | neventsw: 0
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | pid: 27291
[2026-01-09 08:19:34] 2026-01-09 07:18:50,091 | INFO     | pgrp: 27291
[2026-01-09 08:19:34] 2026-01-09 07:18:50,092 | INFO     | corecount: 8
[2026-01-09 08:19:34] 2026-01-09 07:18:50,092 | INFO     | event service: False
[2026-01-09 08:19:34] 2026-01-09 07:18:50,092 | INFO     | sizes: {0: 2283141, 1: 2283997, 2: 2283997, 12: 2284025, 23: 2284053, 34: 2284081, 45: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 88: 2284377, 98: 2284685, 10
[2026-01-09 08:19:34] 2026-01-09 07:18:50,092 | INFO     | --------------------------------------------------
[2026-01-09 08:19:34] 2026-01-09 07:18:50,092 | INFO     | 
[2026-01-09 08:19:34] 2026-01-09 07:18:50,092 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 08:19:34] 2026-01-09 07:18:50,165 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,168 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:19:34] 2026-01-09 07:18:50,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,168 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:19:34] 2026-01-09 07:18:50,168 | INFO     | job 6963076295 has completed (purged errors)
[2026-01-09 08:19:34] 2026-01-09 07:18:50,168 | INFO     | overall cleanup function is called
[2026-01-09 08:19:34] 2026-01-09 07:18:51,176 | INFO     | --- collectZombieJob: --- 10, [27291]
[2026-01-09 08:19:34] 2026-01-09 07:18:51,176 | INFO     | zombie collector waiting for pid 27291
[2026-01-09 08:19:34] 2026-01-09 07:18:51,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:19:34] 2026-01-09 07:18:51,177 | INFO     | collected zombie processes
[2026-01-09 08:19:34] 2026-01-09 07:18:51,177 | INFO     | will attempt to kill all subprocesses of pid=27291
[2026-01-09 08:19:34] 2026-01-09 07:18:51,241 | INFO     | process IDs to be killed: [27291] (in reverse order)
[2026-01-09 08:19:34] 2026-01-09 07:18:51,310 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:19:34] 2026-01-09 07:18:51,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:19:34] 2026-01-09 07:18:51,313 | INFO     | did not find any defunct processes belonging to 27291
[2026-01-09 08:19:34] 2026-01-09 07:18:51,314 | INFO     | did not find any defunct processes belonging to 27291
[2026-01-09 08:19:34] 2026-01-09 07:18:51,315 | INFO     | ready for new job
[2026-01-09 08:19:34] 2026-01-09 07:18:51,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:19:34] 2026-01-09 07:18:51,317 | INFO     | ***************************************
[2026-01-09 08:19:34] 2026-01-09 07:18:51,317 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:19:34] 2026-01-09 07:18:51,317 | INFO     | ***************************************
[2026-01-09 08:19:34] 2026-01-09 07:18:51,317 | INFO     | 
[2026-01-09 08:19:34] 2026-01-09 07:18:51,318 | INFO     | pilot is running in a VM
[2026-01-09 08:19:34] 2026-01-09 07:18:51,318 | INFO     | architecture information:
[2026-01-09 08:19:34] 2026-01-09 07:18:51,318 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:19:34] 2026-01-09 07:18:51,344 | INFO     | cat /etc/os-release:
[2026-01-09 08:19:34] NAME="CentOS Linux"
[2026-01-09 08:19:34] VERSION="7 (Core)"
[2026-01-09 08:19:34] ID="centos"
[2026-01-09 08:19:34] ID_LIKE="rhel fedora"
[2026-01-09 08:19:34] VERSION_ID="7"
[2026-01-09 08:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:19:34] ANSI_COLOR="0;31"
[2026-01-09 08:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:19:34] HOME_URL="https://www.centos.org/"
[2026-01-09 08:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:19:34] 
[2026-01-09 08:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:19:34] 
[2026-01-09 08:19:34] 2026-01-09 07:18:51,344 | INFO     | ***************************************
[2026-01-09 08:19:34] 2026-01-09 07:18:51,848 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 08:19:34] 2026-01-09 07:18:51,869 | INFO     | sufficient remaining disk space (498128125952 B)
[2026-01-09 08:19:34] 2026-01-09 07:18:51,869 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:19:34] 2026-01-09 07:18:51,869 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:19:34] 2026-01-09 07:18:51,869 | INFO     | update_server=False
[2026-01-09 08:19:34] 2026-01-09 07:18:51,869 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:19:34] 2026-01-09 07:18:51,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:19:34] 2026-01-09 07:18:51,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:19:34] 2026-01-09 07:18:51,892 | INFO     | all data control threads have been joined
[2026-01-09 08:19:34] 2026-01-09 07:18:51,945 | INFO     | all job control threads have been joined
[2026-01-09 08:19:34] 2026-01-09 07:18:52,122 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 08:19:34] 2026-01-09 07:18:52,122 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 08:19:34] 2026-01-09 07:18:52,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:19:34] 2026-01-09 07:18:52,123 | INFO     | will abort loop
[2026-01-09 08:19:34] 2026-01-09 07:18:52,586 | INFO     | all payload control threads have been joined
[2026-01-09 08:19:34] 2026-01-09 07:18:52,871 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:52,898 | INFO     | [data] control thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:52,951 | INFO     | [job] control thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:52,997 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,087 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,128 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,277 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,556 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,592 | INFO     | [payload] control thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,598 | INFO     | [job] validate thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,823 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:53,872 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:54,432 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:54,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:19:34] 2026-01-09 07:18:55,730 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:18:55,878 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:19:02,914 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:19:34] 2026-01-09 07:19:03,920 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:19:34] 2026-01-09 07:19:22,935 | INFO     | PID=20815 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 08:19:34] 2026-01-09 07:19:22,936 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:19:34] 2026-01-09 07:19:22,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:19:34] 2026-01-09 07:19:22,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:19:34] 2026-01-09 07:19:27,869 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:19:34] 2026-01-09 07:19:29,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260617963328)>', '<ExcThread(monitor, started 140259673241344)>']
[2026-01-09 08:19:34] 2026-01-09 07:19:29,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:19:34] 2026-01-09 07:19:29,973 | INFO     | [monitor] control thread has ended
[2026-01-09 08:19:34] 2026-01-09 07:19:34,438 | INFO     | all workflow threads have been joined
[2026-01-09 08:19:34] 2026-01-09 07:19:34,438 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:19:34] 2026-01-09 07:19:34,439 | INFO     | traces error code: 0
[2026-01-09 08:19:34] 2026-01-09 07:19:34,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:19:34] 2026-01-09 07:19:34,595 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:19:34] 2026-01-09 07:19:34,602 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:19:34] 2026-01-09 07:19:34,607 [wrapper] pilotpid: 20815
[2026-01-09 08:19:34] 2026-01-09 07:19:34,611 [wrapper] Pilot exit status: 0
[2026-01-09 08:19:34] 2026-01-09 07:19:34,647 [wrapper] pandaids: 6963076295
[2026-01-09 08:19:34] 2026-01-09 07:19:34,698 [wrapper] cleanup supervisor_pilot 12254 20816
[2026-01-09 08:19:34] 2026-01-09 07:19:34,707 [wrapper] Test setup, not cleaning
[2026-01-09 08:19:34] 2026-01-09 07:19:34,712 [wrapper] apfmon messages muted
[2026-01-09 08:19:34] 2026-01-09 07:19:34,718 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:19:34] 2026-01-09 07:19:34,723 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:19:34]  *** Error codes and diagnostics ***
[2026-01-09 08:19:34]     "exeErrorCode": 0,
[2026-01-09 08:19:34]     "exeErrorDiag": "",
[2026-01-09 08:19:34]     "pilotErrorCode": 0,
[2026-01-09 08:19:34]     "pilotErrorDiag": "",
[2026-01-09 08:19:34]  *** Listing of results directory ***
[2026-01-09 08:19:34] total 441076
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 08:19:34] -rwx------. 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:12 queuedata.json
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc       100 Jan  9 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:19:34] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 05:16 run_atlas
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc       105 Jan  9 05:16 job.xml
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc      6390 Jan  9 05:16 init_data.xml
[2026-01-09 08:19:34] -rw-r--r--. 2 boinc boinc 224845824 Jan  9 05:16 EVNT.47898824._000945.pool.root.1
[2026-01-09 08:19:34] -rw-r--r--. 2 boinc boinc     15847 Jan  9 05:16 start_atlas.sh
[2026-01-09 08:19:34] drwxrwx--x. 2 boinc boinc        68 Jan  9 05:16 shared
[2026-01-09 08:19:34] -rw-r--r--. 2 boinc boinc    592396 Jan  9 05:16 input.tar.gz
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc         0 Jan  9 05:16 boinc_lockfile
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc      2519 Jan  9 05:16 pandaJob.out
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc    989771 Jan  9 05:21 agis_schedconf.cvmfs.json
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc   1516240 Jan  9 05:21 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:19:34] drwx------. 5 boinc boinc      4096 Jan  9 05:21 pilot3
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc 219312398 Jan  9 08:18 HITS.47898826._023735.pool.root.1
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc       531 Jan  9 08:18 boinc_task_state.xml
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc      1015 Jan  9 08:18 memory_monitor_summary.json
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc    400718 Jan  9 08:18 log.47898826._023735.job.log.tgz.1
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc      7779 Jan  9 08:18 heartbeat.json
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:19 boinc_mmap_file
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc        28 Jan  9 08:19 wrapper_checkpoint.txt
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc        95 Jan  9 08:19 pilot_heartbeat.json
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc      5067 Jan  9 08:19 pilotlog.txt
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc   1404236 Jan  9 08:19 log.47898826._023735.job.log.1
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc       357 Jan  9 08:19 output.list
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:19 runtime_log
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc   1822720 Jan  9 08:19 result.tar.gz
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc      8817 Jan  9 08:19 runtime_log.err
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc       656 Jan  9 08:19 qifLDmM52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuNkKDmnglKdn.diag
[2026-01-09 08:19:34] -rw-r--r--. 1 boinc boinc     20776 Jan  9 08:19 stderr.txt
[2026-01-09 08:19:34] HITS file was successfully produced:
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc 219312398 Jan  9 08:18 shared/HITS.pool.root.1
[2026-01-09 08:19:34]  *** Contents of shared directory: ***
[2026-01-09 08:19:34] total 436128
[2026-01-09 08:19:34] -rw-r--r--. 2 boinc boinc 224845824 Jan  9 05:16 ATLAS.root_0
[2026-01-09 08:19:34] -rw-r--r--. 2 boinc boinc     15847 Jan  9 05:16 start_atlas.sh
[2026-01-09 08:19:34] -rw-r--r--. 2 boinc boinc    592396 Jan  9 05:16 input.tar.gz
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc 219312398 Jan  9 08:18 HITS.pool.root.1
[2026-01-09 08:19:34] -rw-------. 1 boinc boinc   1822720 Jan  9 08:19 result.tar.gz
08:19:36 (17077): run_atlas exited; CPU time 76644.363283
08:19:36 (17077): called boinc_finish(0)

</stderr_txt>
]]>

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