Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:12 (2630333): wrapper (7.7.26015): starting
06:03:12 (2630333): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 06:03:12] Arguments: --nthreads 4
[2026-01-09 06:03:12] Threads: 4
[2026-01-09 06:03:12] Checking for CVMFS
[2026-01-09 06:03:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 06:03:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 06:03:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 06:03:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 06:03:13] 2.9.2.0 2024436 2197 87776 154931 2 57 25726707 36864000 0 130560 0 1569882 99.990 79972 5034 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 06:03:13] CVMFS is ok
[2026-01-09 06:03:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 06:03:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 06:03:13] Further information can be found at the LHC@home message board.
[2026-01-09 06:03:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 06:03:13] Checking for apptainer binary...
[2026-01-09 06:03:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 06:03:13] Running /usr/bin/apptainer --version
[2026-01-09 06:03:13] apptainer version 1.4.1-1.1
[2026-01-09 06:03:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 06:03:13] magicA250
[2026-01-09 06:03:13] apptainer works
[2026-01-09 06:03:13] Set ATHENA_PROC_NUMBER=4
[2026-01-09 06:03:13] Set ATHENA_CORE_NUMBER=4
[2026-01-09 06:03:13] Starting ATLAS job with PandaID=6963077559
[2026-01-09 06:03:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:43:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:43:36] 2026-01-09 06:42:34,494 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:34,503 | INFO     | all job control threads have been joined
[2026-01-09 07:43:36] 2026-01-09 06:42:34,524 | INFO     | [payload] control thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:34,555 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:34,873 | INFO     | [data] control thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:34,890 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:34,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:43:36] 2026-01-09 06:42:34,975 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:35,113 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:35,264 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:35,509 | INFO     | [job] control thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:35,562 | INFO     | [job] validate thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:35,709 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:35,833 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:36,912 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:42:37,492 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:43:36] 2026-01-09 06:43:03,961 | INFO     | PID=2634113 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:43:36] 2026-01-09 06:43:03,961 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:43:36] 2026-01-09 06:43:03,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:43:36] 2026-01-09 06:43:03,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:43:36] 2026-01-09 06:43:28,925 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:43:36] 2026-01-09 06:43:30,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424041875264)>', '<ExcThread(monitor, started 140423276259072)>']
[2026-01-09 07:43:36] 2026-01-09 06:43:31,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:43:36] 2026-01-09 06:43:31,095 | INFO     | [monitor] control thread has ended
[2026-01-09 07:43:36] 2026-01-09 06:43:35,815 | INFO     | all workflow threads have been joined
[2026-01-09 07:43:36] 2026-01-09 06:43:35,816 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:43:36] 2026-01-09 06:43:35,816 | INFO     | traces error code: 0
[2026-01-09 07:43:36] 2026-01-09 06:43:35,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:43:36] 2026-01-09 06:43:35,893 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:43:36] 2026-01-09 06:43:35,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:43:36] 2026-01-09 06:43:35,902 [wrapper] pilotpid: 2634113
[2026-01-09 07:43:36] 2026-01-09 06:43:35,906 [wrapper] Pilot exit status: 0
[2026-01-09 07:43:36] 2026-01-09 06:43:35,917 [wrapper] pandaids: 6963077559
[2026-01-09 07:43:36] 2026-01-09 06:43:35,941 [wrapper] cleanup supervisor_pilot 2653011 2634114
[2026-01-09 07:43:36] 2026-01-09 06:43:35,945 [wrapper] Test setup, not cleaning
[2026-01-09 07:43:36] 2026-01-09 06:43:35,949 [wrapper] apfmon messages muted
[2026-01-09 07:43:36] 2026-01-09 06:43:35,953 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:43:36] 2026-01-09 06:43:35,956 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:43:36]  *** Error codes and diagnostics ***
[2026-01-09 07:43:36]     "exeErrorCode": 0,
[2026-01-09 07:43:36]     "exeErrorDiag": "",
[2026-01-09 07:43:36]     "pilotErrorCode": 0,
[2026-01-09 07:43:36]     "pilotErrorDiag": "",
[2026-01-09 07:43:36]  *** Listing of results directory ***
[2026-01-09 07:43:36] total 445052
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 07:43:36] -rwx------ 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc       100 Jan  9 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:43:36] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 06:03 run_atlas
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc       105 Jan  9 06:03 job.xml
[2026-01-09 07:43:36] -rw-r--r-- 2 boinc boinc 224253513 Jan  9 06:03 EVNT.47898824._000964.pool.root.1
[2026-01-09 07:43:36] -rw-r--r-- 2 boinc boinc    592395 Jan  9 06:03 input.tar.gz
[2026-01-09 07:43:36] -rw-r--r-- 2 boinc boinc     15847 Jan  9 06:03 start_atlas.sh
[2026-01-09 07:43:36] drwxrwx--x 2 boinc boinc      4096 Jan  9 06:03 shared
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc         0 Jan  9 06:03 boinc_setup_complete
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc      6378 Jan  9 06:03 init_data.xml
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc         0 Jan  9 06:03 boinc_lockfile
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc      2519 Jan  9 06:03 pandaJob.out
[2026-01-09 07:43:36] -rw------- 1 boinc boinc    989771 Jan  9 06:03 agis_schedconf.cvmfs.json
[2026-01-09 07:43:36] -rw------- 1 boinc boinc   1516240 Jan  9 06:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:43:36] drwx------ 5 boinc boinc      4096 Jan  9 06:03 pilot3
[2026-01-09 07:43:36] -rw------- 1 boinc boinc 225277352 Jan  9 07:42 HITS.47898826._024214.pool.root.1
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc       529 Jan  9 07:42 boinc_task_state.xml
[2026-01-09 07:43:36] -rw------- 1 boinc boinc      1025 Jan  9 07:42 memory_monitor_summary.json
[2026-01-09 07:43:36] -rw------- 1 boinc boinc    287949 Jan  9 07:42 log.47898826._024214.job.log.tgz.1
[2026-01-09 07:43:36] -rw------- 1 boinc boinc      7765 Jan  9 07:42 heartbeat.json
[2026-01-09 07:43:36] -rw------- 1 boinc boinc        95 Jan  9 07:43 pilot_heartbeat.json
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc      8192 Jan  9 07:43 boinc_mmap_file
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc        27 Jan  9 07:43 wrapper_checkpoint.txt
[2026-01-09 07:43:36] -rw------- 1 boinc boinc      4752 Jan  9 07:43 pilotlog.txt
[2026-01-09 07:43:36] -rw------- 1 boinc boinc    864426 Jan  9 07:43 log.47898826._024214.job.log.1
[2026-01-09 07:43:36] -rw------- 1 boinc boinc       357 Jan  9 07:43 output.list
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc       620 Jan  9 07:43 runtime_log
[2026-01-09 07:43:36] -rw------- 1 boinc boinc   1167360 Jan  9 07:43 result.tar.gz
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc      8912 Jan  9 07:43 runtime_log.err
[2026-01-09 07:43:36] -rw------- 1 boinc boinc       662 Jan  9 07:43 bbPMDmX52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmROkKDmgF4aNn.diag
[2026-01-09 07:43:36] -rw-r--r-- 1 boinc boinc      6339 Jan  9 07:43 stderr.txt
[2026-01-09 07:43:36] HITS file was successfully produced:
[2026-01-09 07:43:36] -rw------- 1 boinc boinc 225277352 Jan  9 07:42 shared/HITS.pool.root.1
[2026-01-09 07:43:36]  *** Contents of shared directory: ***
[2026-01-09 07:43:36] total 440744
[2026-01-09 07:43:36] -rw-r--r-- 2 boinc boinc 224253513 Jan  9 06:03 ATLAS.root_0
[2026-01-09 07:43:36] -rw-r--r-- 2 boinc boinc    592395 Jan  9 06:03 input.tar.gz
[2026-01-09 07:43:36] -rw-r--r-- 2 boinc boinc     15847 Jan  9 06:03 start_atlas.sh
[2026-01-09 07:43:36] -rw------- 1 boinc boinc 225277352 Jan  9 07:42 HITS.pool.root.1
[2026-01-09 07:43:36] -rw------- 1 boinc boinc   1167360 Jan  9 07:43 result.tar.gz
07:43:37 (2630333): run_atlas exited; CPU time 22766.506894
07:43:37 (2630333): called boinc_finish(0)

</stderr_txt>
]]>

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