Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:48:41 (2656071): wrapper (7.7.26015): starting
02:48:41 (2656071): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 02:48:41] Arguments: --nthreads 4
[2026-01-10 02:48:41] Threads: 4
[2026-01-10 02:48:41] Checking for CVMFS
[2026-01-10 02:48:41] No cvmfs_config command found, will try listing directly
[2026-01-10 02:48:41] CVMFS is ok
[2026-01-10 02:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 02:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 02:48:41] Further information can be found at the LHC@home message board.
[2026-01-10 02:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:48:41] Checking for apptainer binary...
[2026-01-10 02:48:41] which: no apptainer in ((null))
[2026-01-10 02:48:41] apptainer is not installed, using version from CVMFS
[2026-01-10 02:48:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:48:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-01-10 02:48:41] apptainer works
[2026-01-10 02:48:41] Set ATHENA_PROC_NUMBER=4
[2026-01-10 02:48:41] Set ATHENA_CORE_NUMBER=4
[2026-01-10 02:48:41] Starting ATLAS job with PandaID=6963076619
[2026-01-10 02:48:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:06:03]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:06:03] 2026-01-10 06:03:37,309 | INFO     | monitor loop #1103: job 0:6963076619 is in state 'finished'
[2026-01-10 07:06:03] 2026-01-10 06:03:37,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:06:03] 2026-01-10 06:03:38,279 | INFO     | time since job start (15287s) is within the limit (174528.0s)
[2026-01-10 07:06:03] 2026-01-10 06:03:39,812 | INFO     | monitor loop #1104: job 0:6963076619 is in state 'finished'
[2026-01-10 07:06:03] 2026-01-10 06:03:39,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:06:03] 2026-01-10 06:03:40,285 | INFO     | time since job start (15289s) is within the limit (174528.0s)
[2026-01-10 07:06:03] 2026-01-10 06:03:42,290 | INFO     | time since job start (15291s) is within the limit (174528.0s)
[2026-01-10 07:06:03] 2026-01-10 06:03:42,316 | INFO     | monitor loop #1105: job 0:6963076619 is in state 'finished'
[2026-01-10 07:06:03] 2026-01-10 06:03:42,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,311 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 07:06:03] 2026-01-10 06:03:43,320 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2749.166750000001
[2026-01-10 07:06:03] 2026-01-10 06:03:43,332 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6963076619/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,333 | INFO     | extracted standard info from prmon json
[2026-01-10 07:06:03] 2026-01-10 06:03:43,333 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:06:03] 2026-01-10 06:03:43,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:06:03] 2026-01-10 06:03:43,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 07:06:03] 2026-01-10 06:03:43,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 07:06:03] 2026-01-10 06:03:43,339 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:06:03] 2026-01-10 06:03:43,339 | INFO     | sum of square deviations: 4844974562.5
[2026-01-10 07:06:03] 2026-01-10 06:03:43,341 | INFO     | sum of deviations: 27126016922.000008
[2026-01-10 07:06:03] 2026-01-10 06:03:43,341 | INFO     | mean x: 1768017351.5
[2026-01-10 07:06:03] 2026-01-10 06:03:43,341 | INFO     | mean y: 2366082.008
[2026-01-10 07:06:03] 2026-01-10 06:03:43,341 | INFO     | intersect: -9896399737.400497
[2026-01-10 07:06:03] 2026-01-10 06:03:43,342 | INFO     | chi2: 1.3438099827326717
[2026-01-10 07:06:03] 2026-01-10 06:03:43,342 | INFO     | sum of square deviations: 4560048290.0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,344 | INFO     | sum of deviations: 25650541602.0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,344 | INFO     | mean x: 1768017199.0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,344 | INFO     | mean y: 2365292.191836735
[2026-01-10 07:06:03] 2026-01-10 06:03:43,344 | INFO     | intersect: -9942836124.962675
[2026-01-10 07:06:03] 2026-01-10 06:03:43,344 | INFO     | chi2: 1.3439460044757958
[2026-01-10 07:06:03] 2026-01-10 06:03:43,344 | INFO     | current chi2=1.3439460044757958 (change=-0.010122096492206458 %)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,345 | INFO     | right removable region: 244
[2026-01-10 07:06:03] 2026-01-10 06:03:43,345 | INFO     | sum of square deviations: 4560048290.0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,346 | INFO     | sum of deviations: -2836098315.000004
[2026-01-10 07:06:03] 2026-01-10 06:03:43,347 | INFO     | mean x: 1768017504.0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,347 | INFO     | mean y: 2381936.167346939
[2026-01-10 07:06:03] 2026-01-10 06:03:43,347 | INFO     | intersect: 1101991226.48583
[2026-01-10 07:06:03] 2026-01-10 06:03:43,347 | INFO     | chi2: 0.09097366205485591
[2026-01-10 07:06:03] 2026-01-10 06:03:43,347 | INFO     | current chi2=0.09097366205485591 (change=93.2301692036951 %)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,348 | INFO     | sum of square deviations: 4286517580.0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,349 | INFO     | sum of deviations: 1282139754.4999993
[2026-01-10 07:06:03] 2026-01-10 06:03:43,349 | INFO     | mean x: 1768017656.5
[2026-01-10 07:06:03] 2026-01-10 06:03:43,349 | INFO     | mean y: 2379638.029166667
[2026-01-10 07:06:03] 2026-01-10 06:03:43,349 | INFO     | intersect: -526451909.20003515
[2026-01-10 07:06:03] 2026-01-10 06:03:43,350 | INFO     | chi2: 0.0807612058722684
[2026-01-10 07:06:03] 2026-01-10 06:03:43,350 | INFO     | current chi2=0.0807612058722684 (change=11.22572836128058 %)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,350 | INFO     | left removable region: 20
[2026-01-10 07:06:03] 2026-01-10 06:03:43,350 | INFO     | sum of square deviations: 3485088600.0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,352 | INFO     | sum of deviations: 10227666016.000002
[2026-01-10 07:06:03] 2026-01-10 06:03:43,352 | INFO     | mean x: 1768017778.5
[2026-01-10 07:06:03] 2026-01-10 06:03:43,352 | INFO     | mean y: 2372697.8660714286
[2026-01-10 07:06:03] 2026-01-10 06:03:43,352 | INFO     | intersect: -5186217155.731415
[2026-01-10 07:06:03] 2026-01-10 06:03:43,352 | INFO     | chi2: 0.03870461800185059
[2026-01-10 07:06:03] 2026-01-10 06:03:43,353 | INFO     | current memory leak: 2.93 B/s (using 224 data points, chi2=0.04)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,353 | INFO     | could have reported an average CPU frequency of 2693 MHz (12 samples)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,353 | INFO     | ..............................
[2026-01-10 07:06:03] 2026-01-10 06:03:43,353 | INFO     | . Timing measurements:
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | . get job = 0 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | . initial setup = 1 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | . payload setup = 5 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | . stage-in = 0 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | . payload execution = 15254 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | . stage-out = 0 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | . log creation = 0 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,354 | INFO     | ..............................
[2026-01-10 07:06:03] 2026-01-10 06:03:43,445 | INFO     | 
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | job summary report
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | --------------------------------------------------
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | PanDA job id: 6963076619
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | task id: 47898826
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | errors: (none)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | pilot state: finished 
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | transexitcode: 0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | exeerrorcode: 0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | exeerrordiag: 
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | exitcode: 0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | exitmsg: OK
[2026-01-10 07:06:03] 2026-01-10 06:03:43,446 | INFO     | cpuconsumptiontime: 59128 s
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | nevents: 400
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | neventsw: 0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | pid: 2666828
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | pgrp: 2666828
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | corecount: 4
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | event service: False
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | sizes: {0: 2283980, 4: 2284242, 11: 2284270, 15263: 2315430, 15264: 2324450, 15267: 2324506, 15277: 2324828}
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | --------------------------------------------------
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | 
[2026-01-10 07:06:03] 2026-01-10 06:03:43,447 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-01-10 07:06:03] 2026-01-10 06:03:43,470 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,470 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | job 6963076619 has completed (purged errors)
[2026-01-10 07:06:03] 2026-01-10 06:03:43,472 | INFO     | overall cleanup function is called
[2026-01-10 07:06:03] 2026-01-10 06:03:44,480 | INFO     | --- collectZombieJob: --- 10, [2666828]
[2026-01-10 07:06:03] 2026-01-10 06:03:44,480 | INFO     | zombie collector waiting for pid 2666828
[2026-01-10 07:06:03] 2026-01-10 06:03:44,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:06:03] 2026-01-10 06:03:44,481 | INFO     | collected zombie processes
[2026-01-10 07:06:03] 2026-01-10 06:03:44,481 | INFO     | will attempt to kill all subprocesses of pid=2666828
[2026-01-10 07:06:03] 2026-01-10 06:03:44,841 | INFO     | process IDs to be killed: [2666828] (in reverse order)
[2026-01-10 07:06:03] 2026-01-10 06:03:44,958 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:06:03] 2026-01-10 06:03:44,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:06:03] 2026-01-10 06:03:44,971 | INFO     | did not find any defunct processes belonging to 2666828
[2026-01-10 07:06:03] 2026-01-10 06:03:44,984 | INFO     | did not find any defunct processes belonging to 2666828
[2026-01-10 07:06:03] 2026-01-10 06:03:44,984 | INFO     | ready for new job
[2026-01-10 07:06:03] 2026-01-10 06:03:44,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:06:03] 2026-01-10 06:03:44,987 | INFO     | ***************************************
[2026-01-10 07:06:03] 2026-01-10 06:03:44,987 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:06:03] 2026-01-10 06:03:44,987 | INFO     | ***************************************
[2026-01-10 07:06:03] 2026-01-10 06:03:44,987 | INFO     | 
[2026-01-10 07:06:03] 2026-01-10 06:03:44,991 | INFO     | architecture information:
[2026-01-10 07:06:03] 2026-01-10 06:03:44,991 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:06:03] 2026-01-10 06:03:45,006 | INFO     | cat /etc/os-release:
[2026-01-10 07:06:03] NAME="CentOS Linux"
[2026-01-10 07:06:03] VERSION="7 (Core)"
[2026-01-10 07:06:03] ID="centos"
[2026-01-10 07:06:03] ID_LIKE="rhel fedora"
[2026-01-10 07:06:03] VERSION_ID="7"
[2026-01-10 07:06:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:06:03] ANSI_COLOR="0;31"
[2026-01-10 07:06:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:06:03] HOME_URL="https://www.centos.org/"
[2026-01-10 07:06:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:06:03] 
[2026-01-10 07:06:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:06:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:06:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:06:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:06:03] 
[2026-01-10 07:06:03] 2026-01-10 06:03:45,006 | INFO     | ***************************************
[2026-01-10 07:06:03] 2026-01-10 06:03:45,508 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-01-10 07:06:03] 2026-01-10 06:03:45,528 | INFO     | sufficient remaining disk space (664839127040 B)
[2026-01-10 07:06:03] 2026-01-10 06:03:45,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:06:03] 2026-01-10 06:03:45,529 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:06:03] 2026-01-10 06:03:45,529 | INFO     | update_server=False
[2026-01-10 07:06:03] 2026-01-10 06:03:45,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:06:03] 2026-01-10 06:03:45,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:06:03] 2026-01-10 06:03:45,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:06:03] 2026-01-10 06:03:45,824 | INFO     | aborting loop
[2026-01-10 07:06:03] 2026-01-10 06:03:46,090 | INFO     | all payload control threads have been joined
[2026-01-10 07:06:03] 2026-01-10 06:03:46,200 | INFO     | all data control threads have been joined
[2026-01-10 07:06:03] 2026-01-10 06:03:46,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:06:03] 2026-01-10 06:03:46,531 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:46,829 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:46,862 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:46,991 | INFO     | [job] validate thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,026 | INFO     | all job control threads have been joined
[2026-01-10 07:06:03] 2026-01-10 06:03:47,072 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,096 | INFO     | [payload] control thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,140 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,206 | INFO     | [data] control thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,263 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,275 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,495 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:47,857 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:48,032 | INFO     | [job] control thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:48,325 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:48,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:06:03] 2026-01-10 06:03:49,146 [wrapper] supervise_pilot (15 min periods counter: 18)
[2026-01-10 07:06:03] 2026-01-10 06:03:49,461 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:03:49,535 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:06:03] 2026-01-10 06:04:15,897 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:06:03] 2026-01-10 06:04:15,901 | INFO     | PID=2659860 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:06:03] 2026-01-10 06:04:15,902 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:06:03] 2026-01-10 06:04:15,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:06:03] 2026-01-10 06:04:15,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:06:03] 2026-01-10 06:04:16,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22421636892480)>', '<ExcThread(monitor, started 22421195171584)>']
[2026-01-10 07:06:03] 2026-01-10 06:04:16,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:06:03] 2026-01-10 06:04:16,907 | INFO     | [monitor] control thread has ended
[2026-01-10 07:06:03] 2026-01-10 06:04:21,335 | INFO     | all workflow threads have been joined
[2026-01-10 07:06:03] 2026-01-10 06:04:21,335 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:06:03] 2026-01-10 06:04:21,335 | INFO     | traces error code: 0
[2026-01-10 07:06:03] 2026-01-10 06:04:21,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:06:03] 2026-01-10 06:04:21,525 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:06:03] 2026-01-10 06:04:21,529 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:06:03] 2026-01-10 06:04:21,532 [wrapper] pilotpid: 2659860
[2026-01-10 07:06:03] 2026-01-10 06:04:21,535 [wrapper] Pilot exit status: 0
[2026-01-10 07:06:03] 2026-01-10 06:04:21,546 [wrapper] pandaids: 6963076619
[2026-01-10 07:06:03] 2026-01-10 06:04:21,630 [wrapper] cleanup supervisor_pilot 2833973 2659861
[2026-01-10 07:06:03] 2026-01-10 06:04:21,633 [wrapper] Test setup, not cleaning
[2026-01-10 07:06:03] 2026-01-10 06:04:21,636 [wrapper] apfmon messages muted
[2026-01-10 07:06:03] 2026-01-10 06:04:21,639 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:06:03] 2026-01-10 06:04:21,642 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:06:03]  *** Error codes and diagnostics ***
[2026-01-10 07:06:03]     "exeErrorCode": 0,
[2026-01-10 07:06:03]     "exeErrorDiag": "",
[2026-01-10 07:06:03]     "pilotErrorCode": 0,
[2026-01-10 07:06:03]     "pilotErrorDiag": "",
[2026-01-10 07:06:03]  *** Listing of results directory ***
[2026-01-10 07:06:03] total 448460
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-10 07:06:03] -rwx------ 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc       100 Jan 10 02:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:06:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 02:48 run_atlas
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc       105 Jan 10 02:48 job.xml
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc      6639 Jan 10 02:48 init_data.xml
[2026-01-10 07:06:03] -rw-r--r-- 2 boinc boinc 226564910 Jan 10 02:48 EVNT.47898824._000952.pool.root.1
[2026-01-10 07:06:03] -rw-r--r-- 2 boinc boinc     15847 Jan 10 02:48 start_atlas.sh
[2026-01-10 07:06:03] drwxrwx--x 2 boinc boinc      4096 Jan 10 02:48 shared
[2026-01-10 07:06:03] -rw-r--r-- 2 boinc boinc    592398 Jan 10 02:48 input.tar.gz
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc         0 Jan 10 02:48 boinc_lockfile
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc      2519 Jan 10 02:48 pandaJob.out
[2026-01-10 07:06:03] -rw------- 1 boinc boinc    989382 Jan 10 02:48 agis_schedconf.cvmfs.json
[2026-01-10 07:06:03] drwx------ 5 boinc boinc      4096 Jan 10 02:48 pilot3
[2026-01-10 07:06:03] -rw------- 1 boinc boinc 223660214 Jan 10 07:02 HITS.47898826._023915.pool.root.1
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc       528 Jan 10 07:03 boinc_task_state.xml
[2026-01-10 07:06:03] -rw------- 1 boinc boinc        95 Jan 10 07:03 pilot_heartbeat.json
[2026-01-10 07:06:03] -rw------- 1 boinc boinc      1042 Jan 10 07:03 memory_monitor_summary.json
[2026-01-10 07:06:03] -rw------- 1 boinc boinc   1516240 Jan 10 07:03 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:06:03] -rw------- 1 boinc boinc    422035 Jan 10 07:03 log.47898826._023915.job.log.tgz.1
[2026-01-10 07:06:03] -rw------- 1 boinc boinc      7848 Jan 10 07:03 heartbeat.json
[2026-01-10 07:06:03] -rw------- 1 boinc boinc      4758 Jan 10 07:04 pilotlog.txt
[2026-01-10 07:06:03] -rw------- 1 boinc boinc   2121538 Jan 10 07:04 log.47898826._023915.job.log.1
[2026-01-10 07:06:03] -rw------- 1 boinc boinc       357 Jan 10 07:04 output.list
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc       620 Jan 10 07:04 runtime_log
[2026-01-10 07:06:03] -rw------- 1 boinc boinc   2560000 Jan 10 07:04 result.tar.gz
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc      9206 Jan 10 07:04 runtime_log.err
[2026-01-10 07:06:03] -rw------- 1 boinc boinc       669 Jan 10 07:04 9YmLDmV52x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlAfKDmdtNOJo.diag
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc        26 Jan 10 07:05 wrapper_checkpoint.txt
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc      8192 Jan 10 07:06 boinc_mmap_file
[2026-01-10 07:06:03] -rw-r--r-- 1 boinc boinc     21125 Jan 10 07:06 stderr.txt
[2026-01-10 07:06:03] HITS file was successfully produced:
[2026-01-10 07:06:03] -rw------- 1 boinc boinc 223660214 Jan 10 07:02 shared/HITS.pool.root.1
[2026-01-10 07:06:03]  *** Contents of shared directory: ***
[2026-01-10 07:06:03] total 442780
[2026-01-10 07:06:03] -rw-r--r-- 2 boinc boinc 226564910 Jan 10 02:48 ATLAS.root_0
[2026-01-10 07:06:03] -rw-r--r-- 2 boinc boinc     15847 Jan 10 02:48 start_atlas.sh
[2026-01-10 07:06:03] -rw-r--r-- 2 boinc boinc    592398 Jan 10 02:48 input.tar.gz
[2026-01-10 07:06:03] -rw------- 1 boinc boinc 223660214 Jan 10 07:02 HITS.pool.root.1
[2026-01-10 07:06:03] -rw------- 1 boinc boinc   2560000 Jan 10 07:04 result.tar.gz
07:06:05 (2656071): run_atlas exited; CPU time 59781.057701
07:06:05 (2656071): called boinc_finish(0)

</stderr_txt>
]]>

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