Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:31:40 (27569): wrapper (7.7.26015): starting
02:31:40 (27569): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 02:31:40] Arguments: --nthreads 8
[2026-01-09 02:31:40] Threads: 8
[2026-01-09 02:31:40] Checking for CVMFS
[2026-01-09 02:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:31:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:31:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:31:41] 2.11.2.0 16377 34736 97600 154926 3 140 20781891 25165824 758 130560 0 15025750 99.827 8964798 2147 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 02:31:41] CVMFS is ok
[2026-01-09 02:31:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:31:41] Checking for apptainer binary...
[2026-01-09 02:31:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 02:31:41] Running /usr/bin/apptainer --version
[2026-01-09 02:31:41] apptainer version 1.3.2-1.el7
[2026-01-09 02:31:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:31:42] cg-vwn414.simple-grid.lan
[2026-01-09 02:31:42] apptainer works
[2026-01-09 02:31:42] Set ATHENA_PROC_NUMBER=8
[2026-01-09 02:31:42] Set ATHENA_CORE_NUMBER=8
[2026-01-09 02:31:42] Starting ATLAS job with PandaID=6963076609
[2026-01-09 02:31:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:46:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:46:32] 2026-01-09 05:45:46,073 | INFO     | maximum number of monitored processes: 10
[2026-01-09 06:46:32] 2026-01-09 05:45:47,533 | INFO     | time since job start (15227s) is within the limit (174528.0s)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,457 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:46:32] 2026-01-09 05:45:48,458 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 06:46:32] 2026-01-09 05:45:48,460 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963076609/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,461 | INFO     | extracted standard info from prmon json
[2026-01-09 06:46:32] 2026-01-09 05:45:48,461 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:46:32] 2026-01-09 05:45:48,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:46:32] 2026-01-09 05:45:48,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:46:32] 2026-01-09 05:45:48,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:46:32] 2026-01-09 05:45:48,467 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:46:32] 2026-01-09 05:45:48,468 | INFO     | sum of square deviations: 4787066500.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,470 | INFO     | sum of deviations: 90040232241.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,470 | INFO     | mean x: 1767929970.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,470 | INFO     | mean y: 2441432.682730924
[2026-01-09 06:46:32] 2026-01-09 05:45:48,471 | INFO     | intersect: -33250663591.996613
[2026-01-09 06:46:32] 2026-01-09 05:45:48,471 | INFO     | chi2: 7.7765182526996925
[2026-01-09 06:46:32] 2026-01-09 05:45:48,472 | INFO     | sum of square deviations: 4504437945.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,474 | INFO     | sum of deviations: 104519037941.5
[2026-01-09 06:46:32] 2026-01-09 05:45:48,474 | INFO     | mean x: 1767929817.5
[2026-01-09 06:46:32] 2026-01-09 05:45:48,474 | INFO     | mean y: 2449100.4959016396
[2026-01-09 06:46:32] 2026-01-09 05:45:48,475 | INFO     | intersect: -41019832908.8063
[2026-01-09 06:46:32] 2026-01-09 05:45:48,475 | INFO     | chi2: 7.079540302209987
[2026-01-09 06:46:32] 2026-01-09 05:45:48,475 | INFO     | current chi2=7.079540302209987 (change=8.962596471084506 %)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,475 | INFO     | right removable region: 243
[2026-01-09 06:46:32] 2026-01-09 05:45:48,476 | INFO     | sum of square deviations: 4504437945.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,478 | INFO     | sum of deviations: 4360480263.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,478 | INFO     | mean x: 1767930122.5
[2026-01-09 06:46:32] 2026-01-09 05:45:48,478 | INFO     | mean y: 2487630.950819672
[2026-01-09 06:46:32] 2026-01-09 05:45:48,478 | INFO     | intersect: -1708941075.5055685
[2026-01-09 06:46:32] 2026-01-09 05:45:48,479 | INFO     | chi2: 2.93463733197342
[2026-01-09 06:46:32] 2026-01-09 05:45:48,479 | INFO     | current chi2=2.93463733197342 (change=62.26283747286734 %)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,479 | INFO     | sum of square deviations: 4233158440.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,481 | INFO     | sum of deviations: -47994870272.00001
[2026-01-09 06:46:32] 2026-01-09 05:45:48,482 | INFO     | mean x: 1767930275.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,482 | INFO     | mean y: 2516942.246861925
[2026-01-09 06:46:32] 2026-01-09 05:45:48,482 | INFO     | intersect: 20047026355.545906
[2026-01-09 06:46:32] 2026-01-09 05:45:48,482 | INFO     | chi2: 1.0119567696803973
[2026-01-09 06:46:32] 2026-01-09 05:45:48,482 | INFO     | current chi2=1.0119567696803973 (change=65.51680309335195 %)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,483 | INFO     | sum of square deviations: 3972995422.5
[2026-01-09 06:46:32] 2026-01-09 05:45:48,485 | INFO     | sum of deviations: -50154029383.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,485 | INFO     | mean x: 1767930427.5
[2026-01-09 06:46:32] 2026-01-09 05:45:48,485 | INFO     | mean y: 2518161.435897436
[2026-01-09 06:46:32] 2026-01-09 05:45:48,485 | INFO     | intersect: 22320398042.641514
[2026-01-09 06:46:32] 2026-01-09 05:45:48,486 | INFO     | chi2: 0.9730133174486362
[2026-01-09 06:46:32] 2026-01-09 05:45:48,486 | INFO     | current chi2=0.9730133174486362 (change=3.8483316084797248 %)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,486 | INFO     | left removable region: 30
[2026-01-09 06:46:32] 2026-01-09 05:45:48,487 | INFO     | sum of square deviations: 2996454322.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,488 | INFO     | sum of deviations: -11413001118.999994
[2026-01-09 06:46:32] 2026-01-09 05:45:48,489 | INFO     | mean x: 1767930702.0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,489 | INFO     | mean y: 2513009.591549296
[2026-01-09 06:46:32] 2026-01-09 05:45:48,489 | INFO     | intersect: 6736269947.615865
[2026-01-09 06:46:32] 2026-01-09 05:45:48,489 | INFO     | chi2: 0.1189173237240332
[2026-01-09 06:46:32] 2026-01-09 05:45:48,489 | INFO     | current memory leak: -3.81 B/s (using 213 data points, chi2=0.12)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,490 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,490 | INFO     | ..............................
[2026-01-09 06:46:32] 2026-01-09 05:45:48,490 | INFO     | . Timing measurements:
[2026-01-09 06:46:32] 2026-01-09 05:45:48,490 | INFO     | . get job = 0 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,491 | INFO     | . initial setup = 2 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,491 | INFO     | . payload setup = 9 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,491 | INFO     | . stage-in = 0 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,491 | INFO     | . payload execution = 15189 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,491 | INFO     | . stage-out = 1 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,491 | INFO     | . log creation = 0 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,491 | INFO     | ..............................
[2026-01-09 06:46:32] 2026-01-09 05:45:48,606 | INFO     | 
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | job summary report
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | --------------------------------------------------
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | PanDA job id: 6963076609
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | task id: 47898826
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | errors: (none)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | pilot state: finished 
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | transexitcode: 0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | exeerrorcode: 0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,607 | INFO     | exeerrordiag: 
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | exitcode: 0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | exitmsg: OK
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | cpuconsumptiontime: 74636 s
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | nevents: 400
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | neventsw: 0
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | pid: 5336
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | pgrp: 5336
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | corecount: 8
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | event service: False
[2026-01-09 06:46:32] 2026-01-09 05:45:48,608 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 15202: 2314976, 15204: 2324158, 15210: 2324296}
[2026-01-09 06:46:32] 2026-01-09 05:45:48,609 | INFO     | --------------------------------------------------
[2026-01-09 06:46:32] 2026-01-09 05:45:48,609 | INFO     | 
[2026-01-09 06:46:32] 2026-01-09 05:45:48,609 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 06:46:32] 2026-01-09 05:45:48,638 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,638 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,638 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,638 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:46:32] 2026-01-09 05:45:48,641 | INFO     | job 6963076609 has completed (purged errors)
[2026-01-09 06:46:32] 2026-01-09 05:45:48,641 | INFO     | overall cleanup function is called
[2026-01-09 06:46:32] 2026-01-09 05:45:49,649 | INFO     | --- collectZombieJob: --- 10, [5336]
[2026-01-09 06:46:32] 2026-01-09 05:45:49,649 | INFO     | zombie collector waiting for pid 5336
[2026-01-09 06:46:32] 2026-01-09 05:45:49,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:46:32] 2026-01-09 05:45:49,650 | INFO     | collected zombie processes
[2026-01-09 06:46:32] 2026-01-09 05:45:49,650 | INFO     | will attempt to kill all subprocesses of pid=5336
[2026-01-09 06:46:32] 2026-01-09 05:45:49,712 | INFO     | process IDs to be killed: [5336] (in reverse order)
[2026-01-09 06:46:32] 2026-01-09 05:45:49,763 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:46:32] 2026-01-09 05:45:49,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:46:32] 2026-01-09 05:45:49,765 | INFO     | did not find any defunct processes belonging to 5336
[2026-01-09 06:46:32] 2026-01-09 05:45:49,767 | INFO     | did not find any defunct processes belonging to 5336
[2026-01-09 06:46:32] 2026-01-09 05:45:49,767 | INFO     | ready for new job
[2026-01-09 06:46:32] 2026-01-09 05:45:49,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:46:32] 2026-01-09 05:45:49,769 | INFO     | ***************************************
[2026-01-09 06:46:32] 2026-01-09 05:45:49,769 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:46:32] 2026-01-09 05:45:49,769 | INFO     | ***************************************
[2026-01-09 06:46:32] 2026-01-09 05:45:49,769 | INFO     | 
[2026-01-09 06:46:32] 2026-01-09 05:45:49,770 | INFO     | pilot is running in a VM
[2026-01-09 06:46:32] 2026-01-09 05:45:49,770 | INFO     | architecture information:
[2026-01-09 06:46:32] 2026-01-09 05:45:49,770 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:46:32] 2026-01-09 05:45:49,789 | INFO     | cat /etc/os-release:
[2026-01-09 06:46:32] NAME="CentOS Linux"
[2026-01-09 06:46:32] VERSION="7 (Core)"
[2026-01-09 06:46:32] ID="centos"
[2026-01-09 06:46:32] ID_LIKE="rhel fedora"
[2026-01-09 06:46:32] VERSION_ID="7"
[2026-01-09 06:46:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:46:32] ANSI_COLOR="0;31"
[2026-01-09 06:46:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:46:32] HOME_URL="https://www.centos.org/"
[2026-01-09 06:46:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:46:32] 
[2026-01-09 06:46:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:46:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:46:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:46:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:46:32] 
[2026-01-09 06:46:32] 2026-01-09 05:45:49,789 | INFO     | ***************************************
[2026-01-09 06:46:32] 2026-01-09 05:45:50,292 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 06:46:32] 2026-01-09 05:45:50,316 | INFO     | sufficient remaining disk space (498112397312 B)
[2026-01-09 06:46:32] 2026-01-09 05:45:50,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:46:32] 2026-01-09 05:45:50,317 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:46:32] 2026-01-09 05:45:50,317 | INFO     | update_server=False
[2026-01-09 06:46:32] 2026-01-09 05:45:50,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:46:32] 2026-01-09 05:45:50,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:46:32] 2026-01-09 05:45:50,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:46:32] 2026-01-09 05:45:50,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:46:32] 2026-01-09 05:45:50,318 | INFO     | aborting loop
[2026-01-09 06:46:32] 2026-01-09 05:45:50,378 | INFO     | all payload control threads have been joined
[2026-01-09 06:46:32] 2026-01-09 05:45:50,559 | INFO     | all job control threads have been joined
[2026-01-09 06:46:32] 2026-01-09 05:45:51,201 | INFO     | all data control threads have been joined
[2026-01-09 06:46:32] 2026-01-09 05:45:51,323 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,323 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,325 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,355 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,384 | INFO     | [payload] control thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,385 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,565 | INFO     | [job] control thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,663 | INFO     | [job] validate thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:51,671 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:52,206 | INFO     | [data] control thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:52,224 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:52,325 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:52,631 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:52,789 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:52,798 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:45:52,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:46:32] 2026-01-09 05:45:56,960 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:46:32] 2026-01-09 05:46:20,639 | INFO     | PID=31299 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:46:32] 2026-01-09 05:46:20,639 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:46:32] 2026-01-09 05:46:20,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:46:32] 2026-01-09 05:46:20,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:46:32] 2026-01-09 05:46:25,808 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:46:32] 2026-01-09 05:46:26,850 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140582210631488)>', '<ExcThread(monitor, started 140581762217728)>']
[2026-01-09 06:46:32] 2026-01-09 05:46:27,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:46:32] 2026-01-09 05:46:27,678 | INFO     | [monitor] control thread has ended
[2026-01-09 06:46:32] 2026-01-09 05:46:31,876 | INFO     | all workflow threads have been joined
[2026-01-09 06:46:32] 2026-01-09 05:46:31,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:46:32] 2026-01-09 05:46:31,877 | INFO     | traces error code: 0
[2026-01-09 06:46:32] 2026-01-09 05:46:31,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:46:32] 2026-01-09 05:46:32,019 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:46:32] 2026-01-09 05:46:32,023 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:46:32] 2026-01-09 05:46:32,030 [wrapper] pilotpid: 31299
[2026-01-09 06:46:32] 2026-01-09 05:46:32,034 [wrapper] Pilot exit status: 0
[2026-01-09 06:46:32] 2026-01-09 05:46:32,054 [wrapper] pandaids: 6963076609
[2026-01-09 06:46:32] 2026-01-09 05:46:32,094 [wrapper] cleanup supervisor_pilot 29926 31300
[2026-01-09 06:46:32] 2026-01-09 05:46:32,101 [wrapper] Test setup, not cleaning
[2026-01-09 06:46:32] 2026-01-09 05:46:32,107 [wrapper] apfmon messages muted
[2026-01-09 06:46:32] 2026-01-09 05:46:32,114 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:46:32] 2026-01-09 05:46:32,118 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:46:32]  *** Error codes and diagnostics ***
[2026-01-09 06:46:32]     "exeErrorCode": 0,
[2026-01-09 06:46:32]     "exeErrorDiag": "",
[2026-01-09 06:46:32]     "pilotErrorCode": 0,
[2026-01-09 06:46:32]     "pilotErrorDiag": "",
[2026-01-09 06:46:32]  *** Listing of results directory ***
[2026-01-09 06:46:32] total 445272
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 06:46:32] -rwx------. 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:14 queuedata.json
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc       100 Jan  9 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:46:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 02:31 run_atlas
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc       105 Jan  9 02:31 job.xml
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc      6390 Jan  9 02:31 init_data.xml
[2026-01-09 06:46:32] -rw-r--r--. 2 boinc boinc 226564910 Jan  9 02:31 EVNT.47898824._000952.pool.root.1
[2026-01-09 06:46:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:31 start_atlas.sh
[2026-01-09 06:46:32] drwxrwx--x. 2 boinc boinc        68 Jan  9 02:31 shared
[2026-01-09 06:46:32] -rw-r--r--. 2 boinc boinc    592404 Jan  9 02:31 input.tar.gz
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc         0 Jan  9 02:31 boinc_lockfile
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc      2519 Jan  9 02:31 pandaJob.out
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc    989821 Jan  9 02:31 agis_schedconf.cvmfs.json
[2026-01-09 06:46:32] drwx------. 5 boinc boinc      4096 Jan  9 02:32 pilot3
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc 220499743 Jan  9 06:45 HITS.47898826._023905.pool.root.1
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc       531 Jan  9 06:45 boinc_task_state.xml
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc        95 Jan  9 06:45 pilot_heartbeat.json
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc      1017 Jan  9 06:45 memory_monitor_summary.json
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc   1516240 Jan  9 06:45 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc    458489 Jan  9 06:45 log.47898826._023905.job.log.tgz.1
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc      7776 Jan  9 06:45 heartbeat.json
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc      8192 Jan  9 06:46 boinc_mmap_file
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc        28 Jan  9 06:46 wrapper_checkpoint.txt
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc      4809 Jan  9 06:46 pilotlog.txt
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc   2040332 Jan  9 06:46 log.47898826._023905.job.log.1
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc       357 Jan  9 06:46 output.list
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc       620 Jan  9 06:46 runtime_log
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc   2519040 Jan  9 06:46 result.tar.gz
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc      8817 Jan  9 06:46 runtime_log.err
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc       657 Jan  9 06:46 iXgLDmV52x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhAfKDmp872qn.diag
[2026-01-09 06:46:32] -rw-r--r--. 1 boinc boinc     20694 Jan  9 06:46 stderr.txt
[2026-01-09 06:46:32] HITS file was successfully produced:
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc 220499743 Jan  9 06:45 shared/HITS.pool.root.1
[2026-01-09 06:46:32]  *** Contents of shared directory: ***
[2026-01-09 06:46:32] total 439644
[2026-01-09 06:46:32] -rw-r--r--. 2 boinc boinc 226564910 Jan  9 02:31 ATLAS.root_0
[2026-01-09 06:46:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:31 start_atlas.sh
[2026-01-09 06:46:32] -rw-r--r--. 2 boinc boinc    592404 Jan  9 02:31 input.tar.gz
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc 220499743 Jan  9 06:45 HITS.pool.root.1
[2026-01-09 06:46:32] -rw-------. 1 boinc boinc   2519040 Jan  9 06:46 result.tar.gz
06:46:34 (27569): run_atlas exited; CPU time 74773.231949
06:46:34 (27569): called boinc_finish(0)

</stderr_txt>
]]>

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