Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:43:48 (2893): wrapper (7.7.26015): starting
14:43:48 (2893): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 14:43:48] Arguments: --nthreads 8
[2026-01-08 14:43:48] Threads: 8
[2026-01-08 14:43:48] Checking for CVMFS
[2026-01-08 14:43:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 14:43:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 14:43:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 14:43:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 14:43:48] 2.11.2.0 2866 135654 113420 154918 3 58 14205134 20275200 1 130560 0 36668336 99.822 9256529 24630 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 14:43:48] CVMFS is ok
[2026-01-08 14:43:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:43:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:43:48] Further information can be found at the LHC@home message board.
[2026-01-08 14:43:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:43:48] Checking for apptainer binary...
[2026-01-08 14:43:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 14:43:48] Running /usr/bin/apptainer --version
[2026-01-08 14:43:48] apptainer version 1.3.2-1.el7
[2026-01-08 14:43:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:43:50] c-204-35.aglt2.org
[2026-01-08 14:43:50] apptainer works
[2026-01-08 14:43:50] Set ATHENA_PROC_NUMBER=8
[2026-01-08 14:43:50] Set ATHENA_CORE_NUMBER=8
[2026-01-08 14:43:50] Starting ATLAS job with PandaID=6963074082
[2026-01-08 14:43:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:39:30]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:39:30] 2026-01-08 22:38:43,330 | INFO     | 10479s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-08 17:39:30] 2026-01-08 22:38:43,393 | INFO     | monitor loop #771: job 0:6963074082 is in state 'finished'
[2026-01-08 17:39:30] 2026-01-08 22:38:43,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,094 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 17:39:30] 2026-01-08 22:38:45,098 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-08 17:39:30] 2026-01-08 22:38:45,100 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963074082/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,101 | INFO     | extracted standard info from prmon json
[2026-01-08 17:39:30] 2026-01-08 22:38:45,101 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:39:30] 2026-01-08 22:38:45,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:39:30] 2026-01-08 22:38:45,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:39:30] 2026-01-08 22:38:45,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:39:30] 2026-01-08 22:38:45,105 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:39:30] 2026-01-08 22:38:45,106 | INFO     | sum of square deviations: 1577789583.0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,107 | INFO     | sum of deviations: -13547294250.999994
[2026-01-08 17:39:30] 2026-01-08 22:38:45,107 | INFO     | mean x: 1767906693.5
[2026-01-08 17:39:30] 2026-01-08 22:38:45,107 | INFO     | mean y: 2502503.38372093
[2026-01-08 17:39:30] 2026-01-08 22:38:45,107 | INFO     | intersect: 15182189606.918716
[2026-01-08 17:39:30] 2026-01-08 22:38:45,107 | INFO     | chi2: 2.3172379432372514
[2026-01-08 17:39:30] 2026-01-08 22:38:45,108 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,108 | INFO     | sum of deviations: -1868140860.0000052
[2026-01-08 17:39:30] 2026-01-08 22:38:45,109 | INFO     | mean x: 1767906541.0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,109 | INFO     | mean y: 2515526.137724551
[2026-01-08 17:39:30] 2026-01-08 22:38:45,109 | INFO     | intersect: 2289465460.5495005
[2026-01-08 17:39:30] 2026-01-08 22:38:45,109 | INFO     | chi2: 1.5550134342817314
[2026-01-08 17:39:30] 2026-01-08 22:38:45,109 | INFO     | current chi2=1.5550134342817314 (change=32.89366597763669 %)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,110 | INFO     | sum of square deviations: 1318277740.5
[2026-01-08 17:39:30] 2026-01-08 22:38:45,110 | INFO     | sum of deviations: -1732287851.4999979
[2026-01-08 17:39:30] 2026-01-08 22:38:45,111 | INFO     | mean x: 1767906388.5
[2026-01-08 17:39:30] 2026-01-08 22:38:45,111 | INFO     | mean y: 2515690.8209876544
[2026-01-08 17:39:30] 2026-01-08 22:38:45,111 | INFO     | intersect: 2325639768.0175147
[2026-01-08 17:39:30] 2026-01-08 22:38:45,111 | INFO     | chi2: 1.5549335000606725
[2026-01-08 17:39:30] 2026-01-08 22:38:45,111 | INFO     | current chi2=1.5549335000606725 (change=0.005140419966584993 %)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,112 | INFO     | right removable region: 161
[2026-01-08 17:39:30] 2026-01-08 22:38:45,112 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,113 | INFO     | sum of deviations: -38248270020.00002
[2026-01-08 17:39:30] 2026-01-08 22:38:45,113 | INFO     | mean x: 1767906846.0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,113 | INFO     | mean y: 2530295.51497006
[2026-01-08 17:39:30] 2026-01-08 22:38:45,113 | INFO     | intersect: 46825495082.16867
[2026-01-08 17:39:30] 2026-01-08 22:38:45,113 | INFO     | chi2: 0.9317063261349486
[2026-01-08 17:39:30] 2026-01-08 22:38:45,114 | INFO     | current chi2=0.9317063261349486 (change=59.79237570944801 %)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,114 | INFO     | sum of square deviations: 1318277740.5
[2026-01-08 17:39:30] 2026-01-08 22:38:45,115 | INFO     | sum of deviations: -33756863779.500008
[2026-01-08 17:39:30] 2026-01-08 22:38:45,115 | INFO     | mean x: 1767906998.5
[2026-01-08 17:39:30] 2026-01-08 22:38:45,115 | INFO     | mean y: 2524837.7716049384
[2026-01-08 17:39:30] 2026-01-08 22:38:45,115 | INFO     | intersect: 45272951463.16089
[2026-01-08 17:39:30] 2026-01-08 22:38:45,115 | INFO     | chi2: 0.9276653625042963
[2026-01-08 17:39:30] 2026-01-08 22:38:45,115 | INFO     | current chi2=0.9276653625042963 (change=0.4337164530604488 %)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,116 | INFO     | left removable region: 20
[2026-01-08 17:39:30] 2026-01-08 22:38:45,116 | INFO     | sum of square deviations: 869188390.0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,117 | INFO     | sum of deviations: -10789155095.000002
[2026-01-08 17:39:30] 2026-01-08 22:38:45,117 | INFO     | mean x: 1767906968.0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,117 | INFO     | mean y: 2524265.3475177307
[2026-01-08 17:39:30] 2026-01-08 22:38:45,117 | INFO     | intersect: 21947389947.783985
[2026-01-08 17:39:30] 2026-01-08 22:38:45,117 | INFO     | chi2: 0.0947391451645901
[2026-01-08 17:39:30] 2026-01-08 22:38:45,117 | INFO     | current memory leak: -12.41 B/s (using 141 data points, chi2=0.09)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,118 | INFO     | could have reported an average CPU frequency of 2026 MHz (9 samples)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,118 | INFO     | ..............................
[2026-01-08 17:39:30] 2026-01-08 22:38:45,118 | INFO     | . Timing measurements:
[2026-01-08 17:39:30] 2026-01-08 22:38:45,118 | INFO     | . get job = 0 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,118 | INFO     | . initial setup = 2 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,118 | INFO     | . payload setup = 8 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,118 | INFO     | . stage-in = 0 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,119 | INFO     | . payload execution = 10438 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,119 | INFO     | . stage-out = 0 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,119 | INFO     | . log creation = 0 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,119 | INFO     | ..............................
[2026-01-08 17:39:30] 2026-01-08 22:38:45,210 | INFO     | 
[2026-01-08 17:39:30] 2026-01-08 22:38:45,211 | INFO     | job summary report
[2026-01-08 17:39:30] 2026-01-08 22:38:45,211 | INFO     | --------------------------------------------------
[2026-01-08 17:39:30] 2026-01-08 22:38:45,211 | INFO     | PanDA job id: 6963074082
[2026-01-08 17:39:30] 2026-01-08 22:38:45,214 | INFO     | task id: 47898826
[2026-01-08 17:39:30] 2026-01-08 22:38:45,214 | INFO     | errors: (none)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,214 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:39:30] 2026-01-08 22:38:45,215 | INFO     | pilot state: finished 
[2026-01-08 17:39:30] 2026-01-08 22:38:45,215 | INFO     | transexitcode: 0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,215 | INFO     | exeerrorcode: 0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,215 | INFO     | exeerrordiag: 
[2026-01-08 17:39:30] 2026-01-08 22:38:45,215 | INFO     | exitcode: 0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,215 | INFO     | exitmsg: OK
[2026-01-08 17:39:30] 2026-01-08 22:38:45,216 | INFO     | cpuconsumptiontime: 79595 s
[2026-01-08 17:39:30] 2026-01-08 22:38:45,216 | INFO     | nevents: 400
[2026-01-08 17:39:30] 2026-01-08 22:38:45,216 | INFO     | neventsw: 0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,216 | INFO     | pid: 13127
[2026-01-08 17:39:30] 2026-01-08 22:38:45,216 | INFO     | pgrp: 13127
[2026-01-08 17:39:30] 2026-01-08 22:38:45,217 | INFO     | corecount: 8
[2026-01-08 17:39:30] 2026-01-08 22:38:45,217 | INFO     | event service: False
[2026-01-08 17:39:30] 2026-01-08 22:38:45,217 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 10450: 2312987, 10453: 2321985, 10455: 2322169, 10461: 2322427}
[2026-01-08 17:39:30] 2026-01-08 22:38:45,217 | INFO     | --------------------------------------------------
[2026-01-08 17:39:30] 2026-01-08 22:38:45,217 | INFO     | 
[2026-01-08 17:39:30] 2026-01-08 22:38:45,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 17:39:30] 2026-01-08 22:38:45,246 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,247 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,247 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,247 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,250 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,250 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:39:30] 2026-01-08 22:38:45,251 | INFO     | job 6963074082 has completed (purged errors)
[2026-01-08 17:39:30] 2026-01-08 22:38:45,251 | INFO     | overall cleanup function is called
[2026-01-08 17:39:30] 2026-01-08 22:38:46,255 | INFO     | --- collectZombieJob: --- 10, [13127]
[2026-01-08 17:39:30] 2026-01-08 22:38:46,255 | INFO     | zombie collector waiting for pid 13127
[2026-01-08 17:39:30] 2026-01-08 22:38:46,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:39:30] 2026-01-08 22:38:46,255 | INFO     | collected zombie processes
[2026-01-08 17:39:30] 2026-01-08 22:38:46,256 | INFO     | will attempt to kill all subprocesses of pid=13127
[2026-01-08 17:39:30] 2026-01-08 22:38:46,353 | INFO     | process IDs to be killed: [13127] (in reverse order)
[2026-01-08 17:39:30] 2026-01-08 22:38:46,415 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:39:30] 2026-01-08 22:38:46,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:39:30] 2026-01-08 22:38:46,420 | INFO     | did not find any defunct processes belonging to 13127
[2026-01-08 17:39:30] 2026-01-08 22:38:46,423 | INFO     | did not find any defunct processes belonging to 13127
[2026-01-08 17:39:30] 2026-01-08 22:38:46,424 | INFO     | ready for new job
[2026-01-08 17:39:30] 2026-01-08 22:38:46,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:39:30] 2026-01-08 22:38:46,426 | INFO     | ***************************************
[2026-01-08 17:39:30] 2026-01-08 22:38:46,427 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:39:30] 2026-01-08 22:38:46,427 | INFO     | ***************************************
[2026-01-08 17:39:30] 2026-01-08 22:38:46,427 | INFO     | 
[2026-01-08 17:39:30] 2026-01-08 22:38:46,427 | INFO     | architecture information:
[2026-01-08 17:39:30] 2026-01-08 22:38:46,428 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:39:30] 2026-01-08 22:38:46,445 | INFO     | cat /etc/os-release:
[2026-01-08 17:39:30] NAME="CentOS Linux"
[2026-01-08 17:39:30] VERSION="7 (Core)"
[2026-01-08 17:39:30] ID="centos"
[2026-01-08 17:39:30] ID_LIKE="rhel fedora"
[2026-01-08 17:39:30] VERSION_ID="7"
[2026-01-08 17:39:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:39:30] ANSI_COLOR="0;31"
[2026-01-08 17:39:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:39:30] HOME_URL="https://www.centos.org/"
[2026-01-08 17:39:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:39:30] 
[2026-01-08 17:39:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:39:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:39:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:39:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:39:30] 
[2026-01-08 17:39:30] 2026-01-08 22:38:46,446 | INFO     | ***************************************
[2026-01-08 17:39:30] 2026-01-08 22:38:46,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 17:39:30] 2026-01-08 22:38:46,968 | INFO     | sufficient remaining disk space (18500026368 B)
[2026-01-08 17:39:30] 2026-01-08 22:38:46,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:39:30] 2026-01-08 22:38:46,969 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:39:30] 2026-01-08 22:38:46,969 | INFO     | update_server=False
[2026-01-08 17:39:30] 2026-01-08 22:38:46,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:39:30] 2026-01-08 22:38:46,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:39:30] 2026-01-08 22:38:46,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:39:30] 2026-01-08 22:38:46,970 | INFO     | aborting loop
[2026-01-08 17:39:30] 2026-01-08 22:38:47,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:39:30] 2026-01-08 22:38:47,325 | INFO     | all data control threads have been joined
[2026-01-08 17:39:30] 2026-01-08 22:38:47,667 | INFO     | all job control threads have been joined
[2026-01-08 17:39:30] 2026-01-08 22:38:47,975 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:47,976 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:47,976 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:48,025 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:48,086 | INFO     | all payload control threads have been joined
[2026-01-08 17:39:30] 2026-01-08 22:38:48,332 | INFO     | [data] control thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:48,492 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:48,673 | INFO     | [job] control thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:48,774 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:49,017 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:49,080 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:49,089 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:49,091 | INFO     | [payload] control thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:49,092 | INFO     | [job] validate thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:49,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:39:30] 2026-01-08 22:38:49,102 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:49,440 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:38:53,103 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:39:30] 2026-01-08 22:39:16,551 | INFO     | PID=6732 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 17:39:30] 2026-01-08 22:39:16,551 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:39:30] 2026-01-08 22:39:16,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:39:30] 2026-01-08 22:39:16,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:39:30] 2026-01-08 22:39:23,884 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:39:30] 2026-01-08 22:39:24,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958333531968)>', '<ExcThread(monitor, started 139957632997120)>']
[2026-01-08 17:39:30] 2026-01-08 22:39:25,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:39:30] 2026-01-08 22:39:25,593 | INFO     | [monitor] control thread has ended
[2026-01-08 17:39:30] 2026-01-08 22:39:29,641 | INFO     | all workflow threads have been joined
[2026-01-08 17:39:30] 2026-01-08 22:39:29,642 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:39:30] 2026-01-08 22:39:29,643 | INFO     | traces error code: 0
[2026-01-08 17:39:30] 2026-01-08 22:39:29,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:39:30] 2026-01-08 22:39:29,784 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:39:30] 2026-01-08 22:39:29,790 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:39:30] 2026-01-08 22:39:29,794 [wrapper] pilotpid: 6732
[2026-01-08 17:39:30] 2026-01-08 22:39:29,799 [wrapper] Pilot exit status: 0
[2026-01-08 17:39:30] 2026-01-08 22:39:29,816 [wrapper] pandaids: 6963074082
[2026-01-08 17:39:30] 2026-01-08 22:39:29,870 [wrapper] cleanup supervisor_pilot 25498 6733
[2026-01-08 17:39:30] 2026-01-08 22:39:29,875 [wrapper] Test setup, not cleaning
[2026-01-08 17:39:30] 2026-01-08 22:39:29,880 [wrapper] apfmon messages muted
[2026-01-08 17:39:30] 2026-01-08 22:39:29,885 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:39:30] 2026-01-08 22:39:29,890 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:39:30]  *** Error codes and diagnostics ***
[2026-01-08 17:39:30]     "exeErrorCode": 0,
[2026-01-08 17:39:30]     "exeErrorDiag": "",
[2026-01-08 17:39:30]     "pilotErrorCode": 0,
[2026-01-08 17:39:30]     "pilotErrorDiag": "",
[2026-01-08 17:39:30]  *** Listing of results directory ***
[2026-01-08 17:39:30] total 440352
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 17:39:30] -rwx------ 1 boincer umatlas     36322 Jan  8 06:09 runpilot2-wrapper.sh
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 06:12 queuedata.json
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas       100 Jan  8 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:39:30] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 14:43 run_atlas
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas       105 Jan  8 14:43 job.xml
[2026-01-08 17:39:30] -rw-r--r-- 2 boincer umatlas 223907940 Jan  8 14:43 EVNT.47898824._000908.pool.root.1
[2026-01-08 17:39:30] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 14:43 start_atlas.sh
[2026-01-08 17:39:30] drwxrwx--x 2 boincer umatlas      4096 Jan  8 14:43 shared
[2026-01-08 17:39:30] -rw-r--r-- 2 boincer umatlas    592403 Jan  8 14:43 input.tar.gz
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas         0 Jan  8 14:43 boinc_lockfile
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 14:43 pandaJob.out
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas        57 Jan  8 14:43 setup.sh.local
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas    989845 Jan  8 14:44 agis_schedconf.cvmfs.json
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas   1516240 Jan  8 14:44 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:39:30] drwx------ 5 boincer umatlas      4096 Jan  8 14:44 pilot3
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas      5911 Jan  8 17:31 init_data.xml
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas 219404882 Jan  8 17:37 HITS.47898826._022779.pool.root.1
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas       530 Jan  8 17:38 boinc_task_state.xml
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas      1050 Jan  8 17:38 memory_monitor_summary.json
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas    396517 Jan  8 17:38 log.47898826._022779.job.log.tgz.1
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas        95 Jan  8 17:38 pilot_heartbeat.json
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas      7847 Jan  8 17:38 heartbeat.json
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 17:39 boinc_mmap_file
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas        28 Jan  8 17:39 wrapper_checkpoint.txt
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas      4745 Jan  8 17:39 pilotlog.txt
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas   1450894 Jan  8 17:39 log.47898826._022779.job.log.1
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas       357 Jan  8 17:39 output.list
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas       620 Jan  8 17:39 runtime_log
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas   1863680 Jan  8 17:39 result.tar.gz
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas      9343 Jan  8 17:39 runtime_log.err
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas       662 Jan  8 17:39 QEmMDmy42x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsJkKDmJLG4um.diag
[2026-01-08 17:39:30] -rw-r--r-- 1 boincer umatlas     21126 Jan  8 17:39 stderr.txt
[2026-01-08 17:39:30] HITS file was successfully produced:
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas 219404882 Jan  8 17:37 shared/HITS.pool.root.1
[2026-01-08 17:39:30]  *** Contents of shared directory: ***
[2026-01-08 17:39:30] total 435348
[2026-01-08 17:39:30] -rw-r--r-- 2 boincer umatlas 223907940 Jan  8 14:43 ATLAS.root_0
[2026-01-08 17:39:30] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 14:43 start_atlas.sh
[2026-01-08 17:39:30] -rw-r--r-- 2 boincer umatlas    592403 Jan  8 14:43 input.tar.gz
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas 219404882 Jan  8 17:37 HITS.pool.root.1
[2026-01-08 17:39:30] -rw------- 1 boincer umatlas   1863680 Jan  8 17:39 result.tar.gz
17:39:31 (2893): run_atlas exited; CPU time 79551.785824
17:39:31 (2893): called boinc_finish(0)

</stderr_txt>
]]>

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