Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:36:22 (2859316): wrapper (7.7.26015): starting
04:36:22 (2859316): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 04:36:22] Arguments: --nthreads 12
[2026-01-09 04:36:22] Threads: 12
[2026-01-09 04:36:22] Checking for CVMFS
[2026-01-09 04:36:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:36:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:36:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:43:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:43:29] 2.13.3.0 2972176 16738 291852 154929 0 59 28706383 46080001 8678 130560 0 77814090 99.815 39332245 24907 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-09 04:43:29] CVMFS is ok
[2026-01-09 04:43:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:43:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:43:29] Further information can be found at the LHC@home message board.
[2026-01-09 04:43:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:43:29] Checking for apptainer binary...
[2026-01-09 04:43:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:43:29] Running /usr/bin/apptainer --version
[2026-01-09 04:43:29] apptainer version 1.4.5-2.el9
[2026-01-09 04:43:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:43:30] mff2104.farm.particle.cz
[2026-01-09 04:43:30] apptainer works
[2026-01-09 04:43:30] Set ATHENA_PROC_NUMBER=12
[2026-01-09 04:43:30] Set ATHENA_CORE_NUMBER=12
[2026-01-09 04:43:30] Starting ATLAS job with PandaID=6963074084
[2026-01-09 04:43:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:08:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:08:42] 2026-01-09 06:03:45,337 | INFO     | fitting pss+swap vs Time
[2026-01-09 07:08:42] 2026-01-09 06:03:45,337 | INFO     | sum of square deviations: 729472405.9699264
[2026-01-09 07:08:42] 2026-01-09 06:03:45,338 | INFO     | sum of deviations: 47270697330.21053
[2026-01-09 07:08:42] 2026-01-09 06:03:45,338 | INFO     | mean x: 1767934486.0150375
[2026-01-09 07:08:42] 2026-01-09 06:03:45,338 | INFO     | mean y: 2606229.8947368423
[2026-01-09 07:08:42] 2026-01-09 06:03:45,338 | INFO     | intersect: -114561694357.92427
[2026-01-09 07:08:42] 2026-01-09 06:03:45,338 | INFO     | chi2: 2.693382729315491
[2026-01-09 07:08:42] 2026-01-09 06:03:45,339 | INFO     | sum of square deviations: 650252925.96875
[2026-01-09 07:08:42] 2026-01-09 06:03:45,339 | INFO     | sum of deviations: 45001923315.953125
[2026-01-09 07:08:42] 2026-01-09 06:03:45,339 | INFO     | mean x: 1767934333.515625
[2026-01-09 07:08:42] 2026-01-09 06:03:45,344 | INFO     | mean y: 2601872.2734375
[2026-01-09 07:08:42] 2026-01-09 06:03:45,344 | INFO     | intersect: -122350473565.22853
[2026-01-09 07:08:42] 2026-01-09 06:03:45,344 | INFO     | chi2: 2.6942738020345534
[2026-01-09 07:08:42] 2026-01-09 06:03:45,344 | INFO     | current chi2=2.6942738020345534 (change=-0.03308377637399442 %)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,344 | INFO     | right removable region: 127
[2026-01-09 07:08:42] 2026-01-09 06:03:45,344 | INFO     | sum of square deviations: 650251705.96875
[2026-01-09 07:08:42] 2026-01-09 06:03:45,345 | INFO     | sum of deviations: 14028598464.03125
[2026-01-09 07:08:42] 2026-01-09 06:03:45,345 | INFO     | mean x: 1767934638.515625
[2026-01-09 07:08:42] 2026-01-09 06:03:45,345 | INFO     | mean y: 2669621.984375
[2026-01-09 07:08:42] 2026-01-09 06:03:45,345 | INFO     | intersect: -38138937584.47156
[2026-01-09 07:08:42] 2026-01-09 06:03:45,346 | INFO     | chi2: 0.18676900421140402
[2026-01-09 07:08:42] 2026-01-09 06:03:45,346 | INFO     | current chi2=0.18676900421140402 (change=93.06563444628345 %)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,346 | INFO     | sum of square deviations: 576984605.9674811
[2026-01-09 07:08:42] 2026-01-09 06:03:45,347 | INFO     | sum of deviations: 5211126607.796747
[2026-01-09 07:08:42] 2026-01-09 06:03:45,347 | INFO     | mean x: 1767934791.0162601
[2026-01-09 07:08:42] 2026-01-09 06:03:45,347 | INFO     | mean y: 2687981.601626016
[2026-01-09 07:08:42] 2026-01-09 06:03:45,347 | INFO     | intersect: -15964691277.791744
[2026-01-09 07:08:42] 2026-01-09 06:03:45,347 | INFO     | chi2: 0.06449854330821149
[2026-01-09 07:08:42] 2026-01-09 06:03:45,347 | INFO     | current chi2=0.06449854330821149 (change=65.4661416756254 %)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,348 | INFO     | sum of square deviations: 509438543.46610177
[2026-01-09 07:08:42] 2026-01-09 06:03:45,348 | INFO     | sum of deviations: 1024891835.9576274
[2026-01-09 07:08:42] 2026-01-09 06:03:45,348 | INFO     | mean x: 1767934943.5169492
[2026-01-09 07:08:42] 2026-01-09 06:03:45,348 | INFO     | mean y: 2697254.7711864407
[2026-01-09 07:08:42] 2026-01-09 06:03:45,349 | INFO     | intersect: -3554045974.32706
[2026-01-09 07:08:42] 2026-01-09 06:03:45,349 | INFO     | chi2: 0.005916457007096612
[2026-01-09 07:08:42] 2026-01-09 06:03:45,349 | INFO     | current chi2=0.005916457007096612 (change=90.82699127199764 %)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,349 | INFO     | sum of square deviations: 447380955.96460223
[2026-01-09 07:08:42] 2026-01-09 06:03:45,350 | INFO     | sum of deviations: 1221512750.6106193
[2026-01-09 07:08:42] 2026-01-09 06:03:45,350 | INFO     | mean x: 1767935096.017699
[2026-01-09 07:08:42] 2026-01-09 06:03:45,350 | INFO     | mean y: 2696761.1946902657
[2026-01-09 07:08:42] 2026-01-09 06:03:45,350 | INFO     | intersect: -4824409161.0531435
[2026-01-09 07:08:42] 2026-01-09 06:03:45,350 | INFO     | chi2: 0.0055879313123851975
[2026-01-09 07:08:42] 2026-01-09 06:03:45,350 | INFO     | current chi2=0.0055879313123851975 (change=5.552743716676351 %)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,350 | INFO     | left removable region: 40
[2026-01-09 07:08:42] 2026-01-09 06:03:45,351 | INFO     | sum of square deviations: 204167244.9885056
[2026-01-09 07:08:42] 2026-01-09 06:03:45,351 | INFO     | sum of deviations: 1115117373.5977008
[2026-01-09 07:08:42] 2026-01-09 06:03:45,351 | INFO     | mean x: 1767935523.0114942
[2026-01-09 07:08:42] 2026-01-09 06:03:45,351 | INFO     | mean y: 2695409.4022988505
[2026-01-09 07:08:42] 2026-01-09 06:03:45,351 | INFO     | intersect: -9653386383.84346
[2026-01-09 07:08:42] 2026-01-09 06:03:45,352 | INFO     | chi2: 0.0002917583838853486
[2026-01-09 07:08:42] 2026-01-09 06:03:45,352 | INFO     | current memory leak: 5.46 B/s (using 87 data points, chi2=0.00)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,352 | INFO     | could have reported an average CPU frequency of 2764 MHz (8 samples)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,352 | INFO     | ..............................
[2026-01-09 07:08:42] 2026-01-09 06:03:45,352 | INFO     | . Timing measurements:
[2026-01-09 07:08:42] 2026-01-09 06:03:45,352 | INFO     | . get job = 0 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,353 | INFO     | . initial setup = 2 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,353 | INFO     | . payload setup = 51 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,353 | INFO     | . stage-in = 0 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,353 | INFO     | . payload execution = 8151 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,353 | INFO     | . stage-out = 2 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,353 | INFO     | . log creation = 0 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,353 | INFO     | ..............................
[2026-01-09 07:08:42] 2026-01-09 06:03:45,531 | INFO     | 
[2026-01-09 07:08:42] 2026-01-09 06:03:45,531 | INFO     | job summary report
[2026-01-09 07:08:42] 2026-01-09 06:03:45,531 | INFO     | --------------------------------------------------
[2026-01-09 07:08:42] 2026-01-09 06:03:45,531 | INFO     | PanDA job id: 6963074084
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | task id: 47898826
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | errors: (none)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | pilot state: finished 
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | transexitcode: 0
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | exeerrorcode: 0
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | exeerrordiag: 
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | exitcode: 0
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | exitmsg: OK
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | cpuconsumptiontime: 52297 s
[2026-01-09 07:08:42] 2026-01-09 06:03:45,532 | INFO     | nevents: 400
[2026-01-09 07:08:42] 2026-01-09 06:03:45,533 | INFO     | neventsw: 0
[2026-01-09 07:08:42] 2026-01-09 06:03:45,533 | INFO     | pid: 2954199
[2026-01-09 07:08:42] 2026-01-09 06:03:45,533 | INFO     | pgrp: 2954199
[2026-01-09 07:08:42] 2026-01-09 06:03:45,533 | INFO     | corecount: 12
[2026-01-09 07:08:42] 2026-01-09 06:03:45,537 | INFO     | event service: False
[2026-01-09 07:08:42] 2026-01-09 06:03:45,537 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 34: 2284344, 44: 2284344, 8206: 2312402, 8207: 2312401, 8210: 2321457, 8212: 2321513, 8264: 2321707}
[2026-01-09 07:08:42] 2026-01-09 06:03:45,537 | INFO     | --------------------------------------------------
[2026-01-09 07:08:42] 2026-01-09 06:03:45,537 | INFO     | 
[2026-01-09 07:08:42] 2026-01-09 06:03:45,537 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2026-01-09 07:08:42] 2026-01-09 06:03:45,756 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 07:08:42] 2026-01-09 06:03:45,758 | INFO     | job 6963074084 has completed (purged errors)
[2026-01-09 07:08:42] 2026-01-09 06:03:45,759 | INFO     | overall cleanup function is called
[2026-01-09 07:08:42] 2026-01-09 06:03:45,972 | INFO     | PID=2922999 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:08:42] 2026-01-09 06:03:45,972 | INFO     | .. there are 12 such processes running
[2026-01-09 07:08:42] 2026-01-09 06:03:46,781 | INFO     | --- collectZombieJob: --- 10, [2954199]
[2026-01-09 07:08:42] 2026-01-09 06:03:46,781 | INFO     | zombie collector waiting for pid 2954199
[2026-01-09 07:08:42] 2026-01-09 06:03:46,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 07:08:42] 2026-01-09 06:03:46,781 | INFO     | collected zombie processes
[2026-01-09 07:08:42] 2026-01-09 06:03:46,781 | INFO     | will attempt to kill all subprocesses of pid=2954199
[2026-01-09 07:08:42] 2026-01-09 06:03:47,467 | INFO     | process IDs to be killed: [2954199] (in reverse order)
[2026-01-09 07:08:42] 2026-01-09 06:03:48,018 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 07:08:42] 2026-01-09 06:03:48,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 07:08:42] 2026-01-09 06:03:48,117 | INFO     | did not find any defunct processes belonging to 2954199
[2026-01-09 07:08:42] 2026-01-09 06:03:48,138 | INFO     | did not find any defunct processes belonging to 2954199
[2026-01-09 07:08:42] 2026-01-09 06:03:48,138 | INFO     | ready for new job
[2026-01-09 07:08:42] 2026-01-09 06:03:48,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 07:08:42] 2026-01-09 06:03:48,141 | INFO     | ***************************************
[2026-01-09 07:08:42] 2026-01-09 06:03:48,141 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 07:08:42] 2026-01-09 06:03:48,141 | INFO     | ***************************************
[2026-01-09 07:08:42] 2026-01-09 06:03:48,141 | INFO     | 
[2026-01-09 07:08:42] 2026-01-09 06:03:48,147 | INFO     | architecture information:
[2026-01-09 07:08:42] 2026-01-09 06:03:48,159 | INFO     | executing command: cat /etc/os-release
[2026-01-09 07:08:42] 2026-01-09 06:03:48,390 | INFO     | cat /etc/os-release:
[2026-01-09 07:08:42] NAME="CentOS Linux"
[2026-01-09 07:08:42] VERSION="7 (Core)"
[2026-01-09 07:08:42] ID="centos"
[2026-01-09 07:08:42] ID_LIKE="rhel fedora"
[2026-01-09 07:08:42] VERSION_ID="7"
[2026-01-09 07:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 07:08:42] ANSI_COLOR="0;31"
[2026-01-09 07:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 07:08:42] HOME_URL="https://www.centos.org/"
[2026-01-09 07:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 07:08:42] 
[2026-01-09 07:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 07:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 07:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 07:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 07:08:42] 
[2026-01-09 07:08:42] 2026-01-09 06:03:48,391 | INFO     | ***************************************
[2026-01-09 07:08:42] 2026-01-09 06:03:48,894 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2026-01-09 07:08:42] 2026-01-09 06:03:49,014 | INFO     | sufficient remaining disk space (1586401116160 B)
[2026-01-09 07:08:42] 2026-01-09 06:03:49,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 07:08:42] 2026-01-09 06:03:49,014 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 07:08:42] 2026-01-09 06:03:49,014 | INFO     | update_server=False
[2026-01-09 07:08:42] 2026-01-09 06:03:49,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 07:08:42] 2026-01-09 06:03:49,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:08:42] 2026-01-09 06:03:49,017 | INFO     | aborting loop
[2026-01-09 07:08:42] 2026-01-09 06:03:49,100 | INFO     | all data control threads have been joined
[2026-01-09 07:08:42] 2026-01-09 06:03:49,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 07:08:42] 2026-01-09 06:03:49,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:08:42] 2026-01-09 06:03:49,935 | INFO     | all payload control threads have been joined
[2026-01-09 07:08:42] 2026-01-09 06:03:50,020 | INFO     | [job] retrieve thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,023 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,106 | INFO     | [data] control thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,192 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,264 | INFO     | all job control threads have been joined
[2026-01-09 07:08:42] 2026-01-09 06:03:50,308 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:08:42] 2026-01-09 06:03:50,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 07:08:42] 2026-01-09 06:03:50,664 | INFO     | [job] validate thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,666 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,893 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,942 | INFO     | [payload] control thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:50,988 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:51,040 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:51,270 | INFO     | [job] control thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:51,420 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:51,517 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:51,540 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:51,600 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:53,681 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:08:42] 2026-01-09 06:03:54,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970314377024)>', '<ExcThread(monitor, started 139969922311936)>']
[2026-01-09 07:08:42] 2026-01-09 06:03:59,243 | INFO     | all workflow threads have been joined
[2026-01-09 07:08:42] 2026-01-09 06:03:59,243 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:08:42] 2026-01-09 06:03:59,243 | INFO     | traces error code: 0
[2026-01-09 07:08:42] 2026-01-09 06:03:59,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:08:42] 2026-01-09 06:04:17,049 | INFO     | 8352s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 07:08:42] 2026-01-09 06:04:18,625 | INFO     | PID=2922999 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:08:42] 2026-01-09 06:04:18,625 | INFO     | .. there are 12 such processes running
[2026-01-09 07:08:42] 2026-01-09 06:04:18,626 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:08:42] 2026-01-09 06:04:18,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:08:42] 2026-01-09 06:04:18,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:08:42] 2026-01-09 06:04:18,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:08:42] 2026-01-09 06:04:18,626 | INFO     | [monitor] control thread has ended
[2026-01-09 07:08:42] 2026-01-09 06:04:18,963 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:08:42] 2026-01-09 06:04:19,007 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:08:42] 2026-01-09 06:04:19,048 [wrapper] pilotpid: 2922999
[2026-01-09 07:08:42] 2026-01-09 06:04:19,078 [wrapper] Pilot exit status: 0
[2026-01-09 07:08:42] 2026-01-09 06:04:19,263 [wrapper] pandaids: 6963074084
[2026-01-09 07:08:42] 2026-01-09 06:04:19,737 [wrapper] cleanup supervisor_pilot 3163880 2923000
[2026-01-09 07:08:42] 2026-01-09 06:04:19,777 [wrapper] Test setup, not cleaning
[2026-01-09 07:08:42] 2026-01-09 06:04:19,818 [wrapper] apfmon messages muted
[2026-01-09 07:08:42] 2026-01-09 06:04:19,857 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:08:42] 2026-01-09 06:04:19,900 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:08:42]  *** Error codes and diagnostics ***
[2026-01-09 07:08:42]     "exeErrorCode": 0,
[2026-01-09 07:08:42]     "exeErrorDiag": "",
[2026-01-09 07:08:42]     "pilotErrorCode": 0,
[2026-01-09 07:08:42]     "pilotErrorDiag": "",
[2026-01-09 07:08:42]  *** Listing of results directory ***
[2026-01-09 07:08:42] total 443364
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 07:08:42] -rwx------ 1 boinc boinc     36322 Jan  8 12:09 runpilot2-wrapper.sh
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:12 queuedata.json
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc       100 Jan  9 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:08:42] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 04:36 run_atlas
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc       105 Jan  9 04:36 job.xml
[2026-01-09 07:08:42] -rw-r--r-- 2 boinc boinc 223907940 Jan  9 04:36 EVNT.47898824._000908.pool.root.1
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc      6673 Jan  9 04:36 init_data.xml
[2026-01-09 07:08:42] -rw-r--r-- 2 boinc boinc     15847 Jan  9 04:36 start_atlas.sh
[2026-01-09 07:08:42] drwxrwx--x 2 boinc boinc      4096 Jan  9 04:36 shared
[2026-01-09 07:08:42] -rw-r--r-- 2 boinc boinc    592398 Jan  9 04:36 input.tar.gz
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc         0 Jan  9 04:36 boinc_lockfile
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc      2519 Jan  9 04:43 pandaJob.out
[2026-01-09 07:08:42] -rw------- 1 boinc boinc    989771 Jan  9 04:44 agis_schedconf.cvmfs.json
[2026-01-09 07:08:42] -rw------- 1 boinc boinc   1516240 Jan  9 04:44 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:08:42] drwx------ 5 boinc boinc      4096 Jan  9 04:44 pilot3
[2026-01-09 07:08:42] -rw------- 1 boinc boinc 223027568 Jan  9 07:01 HITS.47898826._022781.pool.root.1
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc       528 Jan  9 07:01 boinc_task_state.xml
[2026-01-09 07:08:42] -rw------- 1 boinc boinc      1019 Jan  9 07:02 memory_monitor_summary.json
[2026-01-09 07:08:42] -rw------- 1 boinc boinc    426374 Jan  9 07:02 log.47898826._022781.job.log.tgz.1
[2026-01-09 07:08:42] -rw------- 1 boinc boinc      7770 Jan  9 07:03 heartbeat.json
[2026-01-09 07:08:42] -rw------- 1 boinc boinc        95 Jan  9 07:04 pilot_heartbeat.json
[2026-01-09 07:08:42] -rw------- 1 boinc boinc       938 Jan  9 07:04 pilotlog.txt
[2026-01-09 07:08:42] -rw------- 1 boinc boinc   1149161 Jan  9 07:04 log.47898826._022781.job.log.1
[2026-01-09 07:08:42] -rw------- 1 boinc boinc       357 Jan  9 07:04 output.list
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc       620 Jan  9 07:04 runtime_log
[2026-01-09 07:08:42] -rw------- 1 boinc boinc   1597440 Jan  9 07:04 result.tar.gz
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc      8880 Jan  9 07:04 runtime_log.err
[2026-01-09 07:08:42] -rw------- 1 boinc boinc       664 Jan  9 07:04 LgoMDmy42x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuJkKDmIoHpqm.diag
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc        25 Jan  9 07:08 wrapper_checkpoint.txt
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc      8192 Jan  9 07:08 boinc_mmap_file
[2026-01-09 07:08:42] -rw-r--r-- 1 boinc boinc     21225 Jan  9 07:08 stderr.txt
[2026-01-09 07:08:42] HITS file was successfully produced:
[2026-01-09 07:08:42] -rw------- 1 boinc boinc 223027568 Jan  9 07:01 shared/HITS.pool.root.1
[2026-01-09 07:08:42]  *** Contents of shared directory: ***
[2026-01-09 07:08:42] total 438632
[2026-01-09 07:08:42] -rw-r--r-- 2 boinc boinc 223907940 Jan  9 04:36 ATLAS.root_0
[2026-01-09 07:08:42] -rw-r--r-- 2 boinc boinc     15847 Jan  9 04:36 start_atlas.sh
[2026-01-09 07:08:42] -rw-r--r-- 2 boinc boinc    592398 Jan  9 04:36 input.tar.gz
[2026-01-09 07:08:42] -rw------- 1 boinc boinc 223027568 Jan  9 07:01 HITS.pool.root.1
[2026-01-09 07:08:42] -rw------- 1 boinc boinc   1597440 Jan  9 07:04 result.tar.gz
07:08:43 (2859316): run_atlas exited; CPU time 52570.060935
07:08:43 (2859316): called boinc_finish(0)

</stderr_txt>
]]>

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