Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:57:21 (6787): wrapper (7.7.26015): starting
14:57:21 (6787): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 14:57:21] Arguments: --nthreads 8
[2026-01-08 14:57:21] Threads: 8
[2026-01-08 14:57:21] Checking for CVMFS
[2026-01-08 14:57:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 14:57:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 14:57:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 14:57:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 14:57:21] 2.11.2.0 2804 102458 85264 154918 3 82 13998103 20275200 1 130560 0 18972290 99.681 7544354 33817 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 14:57:21] CVMFS is ok
[2026-01-08 14:57:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:57:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:57:21] Further information can be found at the LHC@home message board.
[2026-01-08 14:57:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:57:21] Checking for apptainer binary...
[2026-01-08 14:57:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 14:57:21] Running /usr/bin/apptainer --version
[2026-01-08 14:57:21] apptainer version 1.3.2-1.el7
[2026-01-08 14:57:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:57:23] c-204-3.aglt2.org
[2026-01-08 14:57:23] apptainer works
[2026-01-08 14:57:23] Set ATHENA_PROC_NUMBER=8
[2026-01-08 14:57:23] Set ATHENA_CORE_NUMBER=8
[2026-01-08 14:57:23] Starting ATLAS job with PandaID=6963074669
[2026-01-08 14:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:54:06]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:54:06] 2026-01-08 22:53:14,538 | INFO     | executing command: lscpu
[2026-01-08 17:54:06] 2026-01-08 22:53:14,567 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 17:54:06] 2026-01-08 22:53:14,758 | INFO     | time since job start (10532s) is within the limit (174528.0s)
[2026-01-08 17:54:06] 2026-01-08 22:53:16,764 | INFO     | time since job start (10534s) is within the limit (174528.0s)
[2026-01-08 17:54:06] 2026-01-08 22:53:16,766 | INFO     | monitor loop #775: job 0:6963074669 is in state 'finished'
[2026-01-08 17:54:06] 2026-01-08 22:53:16,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:54:06] 2026-01-08 22:53:18,770 | INFO     | time since job start (10536s) is within the limit (174528.0s)
[2026-01-08 17:54:06] 2026-01-08 22:53:19,270 | INFO     | monitor loop #776: job 0:6963074669 is in state 'finished'
[2026-01-08 17:54:06] 2026-01-08 22:53:19,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:54:06] 2026-01-08 22:53:19,902 | INFO     | PID=10476 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 17:54:06] 2026-01-08 22:53:20,207 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 17:54:06] 2026-01-08 22:53:20,211 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2026-01-08 17:54:06] 2026-01-08 22:53:20,213 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963074669/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,213 | INFO     | extracted standard info from prmon json
[2026-01-08 17:54:06] 2026-01-08 22:53:20,214 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:54:06] 2026-01-08 22:53:20,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:54:06] 2026-01-08 22:53:20,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:54:06] 2026-01-08 22:53:20,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:54:06] 2026-01-08 22:53:20,218 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:54:06] 2026-01-08 22:53:20,218 | INFO     | sum of square deviations: 1577789583.0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,219 | INFO     | sum of deviations: 17084871338.000002
[2026-01-08 17:54:06] 2026-01-08 22:53:20,219 | INFO     | mean x: 1767907509.5
[2026-01-08 17:54:06] 2026-01-08 22:53:20,219 | INFO     | mean y: 2504653.465116279
[2026-01-08 17:54:06] 2026-01-08 22:53:20,219 | INFO     | intersect: -19141031761.486305
[2026-01-08 17:54:06] 2026-01-08 22:53:20,220 | INFO     | chi2: 1.4795702941232003
[2026-01-08 17:54:06] 2026-01-08 22:53:20,220 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,221 | INFO     | sum of deviations: 16446339564.0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,221 | INFO     | mean x: 1767907357.0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,221 | INFO     | mean y: 2503924.622754491
[2026-01-08 17:54:06] 2026-01-08 22:53:20,221 | INFO     | intersect: -20130866825.313686
[2026-01-08 17:54:06] 2026-01-08 22:53:20,221 | INFO     | chi2: 1.4808874257537665
[2026-01-08 17:54:06] 2026-01-08 22:53:20,222 | INFO     | current chi2=1.4808874257537665 (change=-0.08902122702772802 %)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,222 | INFO     | right removable region: 166
[2026-01-08 17:54:06] 2026-01-08 22:53:20,222 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,223 | INFO     | sum of deviations: -7755669198.000001
[2026-01-08 17:54:06] 2026-01-08 22:53:20,223 | INFO     | mean x: 1767907662.0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,223 | INFO     | mean y: 2532600.4790419163
[2026-01-08 17:54:06] 2026-01-08 22:53:20,223 | INFO     | intersect: 9496912167.933739
[2026-01-08 17:54:06] 2026-01-08 22:53:20,224 | INFO     | chi2: 0.09566769774506649
[2026-01-08 17:54:06] 2026-01-08 22:53:20,224 | INFO     | current chi2=0.09566769774506649 (change=93.53408904429514 %)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,224 | INFO     | sum of square deviations: 1318277740.5
[2026-01-08 17:54:06] 2026-01-08 22:53:20,225 | INFO     | sum of deviations: -6577198973.999999
[2026-01-08 17:54:06] 2026-01-08 22:53:20,225 | INFO     | mean x: 1767907814.5
[2026-01-08 17:54:06] 2026-01-08 22:53:20,225 | INFO     | mean y: 2531107.061728395
[2026-01-08 17:54:06] 2026-01-08 22:53:20,225 | INFO     | intersect: 8823040705.6276
[2026-01-08 17:54:06] 2026-01-08 22:53:20,225 | INFO     | chi2: 0.08218655855425082
[2026-01-08 17:54:06] 2026-01-08 22:53:20,226 | INFO     | current chi2=0.08218655855425082 (change=14.09163124918085 %)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,226 | INFO     | left removable region: 20
[2026-01-08 17:54:06] 2026-01-08 22:53:20,226 | INFO     | sum of square deviations: 964976232.5
[2026-01-08 17:54:06] 2026-01-08 22:53:20,227 | INFO     | sum of deviations: 3634938790.5000005
[2026-01-08 17:54:06] 2026-01-08 22:53:20,227 | INFO     | mean x: 1767907936.5
[2026-01-08 17:54:06] 2026-01-08 22:53:20,227 | INFO     | mean y: 2516649.5821917807
[2026-01-08 17:54:06] 2026-01-08 22:53:20,227 | INFO     | intersect: -6656960464.965977
[2026-01-08 17:54:06] 2026-01-08 22:53:20,227 | INFO     | chi2: 0.00014445338881638177
[2026-01-08 17:54:06] 2026-01-08 22:53:20,228 | INFO     | current memory leak: 3.77 B/s (using 146 data points, chi2=0.00)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,228 | INFO     | could have reported an average CPU frequency of 2012 MHz (9 samples)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,228 | INFO     | ..............................
[2026-01-08 17:54:06] 2026-01-08 22:53:20,228 | INFO     | . Timing measurements:
[2026-01-08 17:54:06] 2026-01-08 22:53:20,228 | INFO     | . get job = 0 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,229 | INFO     | . initial setup = 2 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,229 | INFO     | . payload setup = 8 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,229 | INFO     | . stage-in = 0 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,229 | INFO     | . payload execution = 10496 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,229 | INFO     | . stage-out = 0 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,229 | INFO     | . log creation = 0 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,229 | INFO     | ..............................
[2026-01-08 17:54:06] 2026-01-08 22:53:20,318 | INFO     | 
[2026-01-08 17:54:06] 2026-01-08 22:53:20,318 | INFO     | job summary report
[2026-01-08 17:54:06] 2026-01-08 22:53:20,319 | INFO     | --------------------------------------------------
[2026-01-08 17:54:06] 2026-01-08 22:53:20,319 | INFO     | PanDA job id: 6963074669
[2026-01-08 17:54:06] 2026-01-08 22:53:20,319 | INFO     | task id: 47898826
[2026-01-08 17:54:06] 2026-01-08 22:53:20,319 | INFO     | errors: (none)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,319 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:54:06] 2026-01-08 22:53:20,320 | INFO     | pilot state: finished 
[2026-01-08 17:54:06] 2026-01-08 22:53:20,320 | INFO     | transexitcode: 0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,320 | INFO     | exeerrorcode: 0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,320 | INFO     | exeerrordiag: 
[2026-01-08 17:54:06] 2026-01-08 22:53:20,320 | INFO     | exitcode: 0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,320 | INFO     | exitmsg: OK
[2026-01-08 17:54:06] 2026-01-08 22:53:20,321 | INFO     | cpuconsumptiontime: 78869 s
[2026-01-08 17:54:06] 2026-01-08 22:53:20,321 | INFO     | nevents: 400
[2026-01-08 17:54:06] 2026-01-08 22:53:20,321 | INFO     | neventsw: 0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,321 | INFO     | pid: 16978
[2026-01-08 17:54:06] 2026-01-08 22:53:20,321 | INFO     | pgrp: 16978
[2026-01-08 17:54:06] 2026-01-08 22:53:20,322 | INFO     | corecount: 8
[2026-01-08 17:54:06] 2026-01-08 22:53:20,322 | INFO     | event service: False
[2026-01-08 17:54:06] 2026-01-08 22:53:20,322 | INFO     | sizes: {0: 2283969, 6: 2284231, 11: 2284259, 10508: 2313147, 10509: 2313146, 10511: 2322200, 10513: 2322384, 10520: 2322642}
[2026-01-08 17:54:06] 2026-01-08 22:53:20,322 | INFO     | --------------------------------------------------
[2026-01-08 17:54:06] 2026-01-08 22:53:20,324 | INFO     | 
[2026-01-08 17:54:06] 2026-01-08 22:53:20,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 17:54:06] 2026-01-08 22:53:20,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,353 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:54:06] 2026-01-08 22:53:20,357 | INFO     | job 6963074669 has completed (purged errors)
[2026-01-08 17:54:06] 2026-01-08 22:53:20,357 | INFO     | overall cleanup function is called
[2026-01-08 17:54:06] 2026-01-08 22:53:21,366 | INFO     | --- collectZombieJob: --- 10, [16978]
[2026-01-08 17:54:06] 2026-01-08 22:53:21,366 | INFO     | zombie collector waiting for pid 16978
[2026-01-08 17:54:06] 2026-01-08 22:53:21,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:54:06] 2026-01-08 22:53:21,372 | INFO     | collected zombie processes
[2026-01-08 17:54:06] 2026-01-08 22:53:21,372 | INFO     | will attempt to kill all subprocesses of pid=16978
[2026-01-08 17:54:06] 2026-01-08 22:53:21,463 | INFO     | process IDs to be killed: [16978] (in reverse order)
[2026-01-08 17:54:06] 2026-01-08 22:53:21,520 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:54:06] 2026-01-08 22:53:21,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:54:06] 2026-01-08 22:53:21,526 | INFO     | did not find any defunct processes belonging to 16978
[2026-01-08 17:54:06] 2026-01-08 22:53:21,529 | INFO     | did not find any defunct processes belonging to 16978
[2026-01-08 17:54:06] 2026-01-08 22:53:21,529 | INFO     | ready for new job
[2026-01-08 17:54:06] 2026-01-08 22:53:21,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:54:06] 2026-01-08 22:53:21,532 | INFO     | ***************************************
[2026-01-08 17:54:06] 2026-01-08 22:53:21,532 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:54:06] 2026-01-08 22:53:21,532 | INFO     | ***************************************
[2026-01-08 17:54:06] 2026-01-08 22:53:21,532 | INFO     | 
[2026-01-08 17:54:06] 2026-01-08 22:53:21,533 | INFO     | architecture information:
[2026-01-08 17:54:06] 2026-01-08 22:53:21,533 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:54:06] 2026-01-08 22:53:21,552 | INFO     | cat /etc/os-release:
[2026-01-08 17:54:06] NAME="CentOS Linux"
[2026-01-08 17:54:06] VERSION="7 (Core)"
[2026-01-08 17:54:06] ID="centos"
[2026-01-08 17:54:06] ID_LIKE="rhel fedora"
[2026-01-08 17:54:06] VERSION_ID="7"
[2026-01-08 17:54:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:54:06] ANSI_COLOR="0;31"
[2026-01-08 17:54:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:54:06] HOME_URL="https://www.centos.org/"
[2026-01-08 17:54:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:54:06] 
[2026-01-08 17:54:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:54:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:54:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:54:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:54:06] 
[2026-01-08 17:54:06] 2026-01-08 22:53:21,553 | INFO     | ***************************************
[2026-01-08 17:54:06] 2026-01-08 22:53:22,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 17:54:06] 2026-01-08 22:53:22,078 | INFO     | sufficient remaining disk space (18531483648 B)
[2026-01-08 17:54:06] 2026-01-08 22:53:22,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:54:06] 2026-01-08 22:53:22,079 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:54:06] 2026-01-08 22:53:22,080 | INFO     | update_server=False
[2026-01-08 17:54:06] 2026-01-08 22:53:22,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:54:06] 2026-01-08 22:53:22,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:54:06] 2026-01-08 22:53:22,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:54:06] 2026-01-08 22:53:22,494 | INFO     | all payload control threads have been joined
[2026-01-08 17:54:06] 2026-01-08 22:53:22,501 | INFO     | all data control threads have been joined
[2026-01-08 17:54:06] 2026-01-08 22:53:22,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:54:06] 2026-01-08 22:53:22,781 | INFO     | aborting loop
[2026-01-08 17:54:06] 2026-01-08 22:53:23,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:54:06] 2026-01-08 22:53:23,086 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:23,087 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:23,187 | INFO     | all job control threads have been joined
[2026-01-08 17:54:06] 2026-01-08 22:53:23,236 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:23,499 | INFO     | [payload] control thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:23,508 | INFO     | [data] control thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:23,615 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:23,779 | INFO     | [job] validate thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:23,787 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:24,030 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:24,087 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:24,150 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:24,176 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:24,188 | INFO     | [job] control thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:24,332 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:24,407 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:27,030 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:54:06] 2026-01-08 22:53:52,026 | INFO     | PID=10476 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 17:54:06] 2026-01-08 22:53:52,026 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:54:06] 2026-01-08 22:53:52,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:54:06] 2026-01-08 22:53:52,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:54:06] 2026-01-08 22:53:59,153 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:54:06] 2026-01-08 22:54:01,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886105278272)>', '<ExcThread(monitor, started 139885507753728)>']
[2026-01-08 17:54:06] 2026-01-08 22:54:02,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:54:06] 2026-01-08 22:54:02,078 | INFO     | [monitor] control thread has ended
[2026-01-08 17:54:06] 2026-01-08 22:54:06,171 | INFO     | all workflow threads have been joined
[2026-01-08 17:54:06] 2026-01-08 22:54:06,171 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:54:06] 2026-01-08 22:54:06,182 | INFO     | traces error code: 0
[2026-01-08 17:54:06] 2026-01-08 22:54:06,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:54:06] 2026-01-08 22:54:06,308 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:54:06] 2026-01-08 22:54:06,314 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:54:06] 2026-01-08 22:54:06,319 [wrapper] pilotpid: 10476
[2026-01-08 17:54:06] 2026-01-08 22:54:06,323 [wrapper] Pilot exit status: 0
[2026-01-08 17:54:06] 2026-01-08 22:54:06,342 [wrapper] pandaids: 6963074669
[2026-01-08 17:54:06] 2026-01-08 22:54:06,393 [wrapper] cleanup supervisor_pilot 24586 10477
[2026-01-08 17:54:06] 2026-01-08 22:54:06,398 [wrapper] Test setup, not cleaning
[2026-01-08 17:54:06] 2026-01-08 22:54:06,402 [wrapper] apfmon messages muted
[2026-01-08 17:54:06] 2026-01-08 22:54:06,407 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:54:06] 2026-01-08 22:54:06,411 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:54:06]  *** Error codes and diagnostics ***
[2026-01-08 17:54:06]     "exeErrorCode": 0,
[2026-01-08 17:54:06]     "exeErrorDiag": "",
[2026-01-08 17:54:06]     "pilotErrorCode": 0,
[2026-01-08 17:54:06]     "pilotErrorDiag": "",
[2026-01-08 17:54:06]  *** Listing of results directory ***
[2026-01-08 17:54:06] total 443576
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 17:54:06] -rwx------ 1 boincer umatlas     36322 Jan  8 06:10 runpilot2-wrapper.sh
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 06:12 queuedata.json
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas       100 Jan  8 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:54:06] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 14:57 run_atlas
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas       105 Jan  8 14:57 job.xml
[2026-01-08 17:54:06] -rw-r--r-- 2 boincer umatlas 225881046 Jan  8 14:57 EVNT.47898824._000918.pool.root.1
[2026-01-08 17:54:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 14:57 start_atlas.sh
[2026-01-08 17:54:06] drwxrwx--x 2 boincer umatlas      4096 Jan  8 14:57 shared
[2026-01-08 17:54:06] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 14:57 input.tar.gz
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas         0 Jan  8 14:57 boinc_lockfile
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 14:57 pandaJob.out
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas        57 Jan  8 14:57 setup.sh.local
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas    989845 Jan  8 14:57 agis_schedconf.cvmfs.json
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas   1516240 Jan  8 14:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:54:06] drwx------ 5 boincer umatlas      4096 Jan  8 14:57 pilot3
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas      5910 Jan  8 17:49 init_data.xml
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas 220690595 Jan  8 17:52 HITS.47898826._023035.pool.root.1
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas      1050 Jan  8 17:53 memory_monitor_summary.json
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas       530 Jan  8 17:53 boinc_task_state.xml
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas    405592 Jan  8 17:53 log.47898826._023035.job.log.tgz.1
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas        95 Jan  8 17:53 pilot_heartbeat.json
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas      7845 Jan  8 17:53 heartbeat.json
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas        28 Jan  8 17:54 wrapper_checkpoint.txt
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 17:54 boinc_mmap_file
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas      4746 Jan  8 17:54 pilotlog.txt
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas   1460404 Jan  8 17:54 log.47898826._023035.job.log.1
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas       357 Jan  8 17:54 output.list
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas       620 Jan  8 17:54 runtime_log
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas   1884160 Jan  8 17:54 result.tar.gz
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas      9338 Jan  8 17:54 runtime_log.err
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas       662 Jan  8 17:54 o4FKDmA52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmELkKDmWV2FBo.diag
[2026-01-08 17:54:06] -rw-r--r-- 1 boincer umatlas     21483 Jan  8 17:54 stderr.txt
[2026-01-08 17:54:06] HITS file was successfully produced:
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas 220690595 Jan  8 17:52 shared/HITS.pool.root.1
[2026-01-08 17:54:06]  *** Contents of shared directory: ***
[2026-01-08 17:54:06] total 438552
[2026-01-08 17:54:06] -rw-r--r-- 2 boincer umatlas 225881046 Jan  8 14:57 ATLAS.root_0
[2026-01-08 17:54:06] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 14:57 start_atlas.sh
[2026-01-08 17:54:06] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 14:57 input.tar.gz
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas 220690595 Jan  8 17:52 HITS.pool.root.1
[2026-01-08 17:54:06] -rw------- 1 boincer umatlas   1884160 Jan  8 17:54 result.tar.gz
17:54:08 (6787): run_atlas exited; CPU time 78809.154229
17:54:08 (6787): called boinc_finish(0)

</stderr_txt>
]]>

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