Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:07 (2204198): wrapper (7.7.26015): starting
12:29:07 (2204198): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 12:29:07] Arguments: --nthreads 4
[2026-01-11 12:29:07] Threads: 4
[2026-01-11 12:29:07] Checking for CVMFS
[2026-01-11 12:29:07] No cvmfs_config command found, will try listing directly
[2026-01-11 12:29:07] CVMFS is ok
[2026-01-11 12:29:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 12:29:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 12:29:07] Further information can be found at the LHC@home message board.
[2026-01-11 12:29:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 12:29:07] Checking for apptainer binary...
[2026-01-11 12:29:07] which: no apptainer in ((null))
[2026-01-11 12:29:07] apptainer is not installed, using version from CVMFS
[2026-01-11 12:29:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 12:29:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-11 12:29:07] apptainer works
[2026-01-11 12:29:07] Set ATHENA_PROC_NUMBER=4
[2026-01-11 12:29:07] Set ATHENA_CORE_NUMBER=4
[2026-01-11 12:29:07] Starting ATLAS job with PandaID=6963074087
[2026-01-11 12:29:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 16:19:31]  *** The last 200 lines of the pilot log: ***
[2026-01-11 16:19:31] 2026-01-11 15:17:38,138 | INFO     | time since job start (13696s) is within the limit (174528.0s)
[2026-01-11 16:19:31] 2026-01-11 15:17:38,966 | WARNING  | process 2229362 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 16:19:31] 2026-01-11 15:17:38,967 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6963074087/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 16:19:31] 2026-01-11 15:17:39,642 | INFO     | number of running child processes to parent process 2229362: 1
[2026-01-11 16:19:31] 2026-01-11 15:17:39,642 | INFO     | maximum number of monitored processes: 6
[2026-01-11 16:19:31] 2026-01-11 15:17:40,144 | INFO     | time since job start (13698s) is within the limit (174528.0s)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,146 | INFO     | monitor loop #932: job 0:6963074087 is in state 'finished'
[2026-01-11 16:19:31] 2026-01-11 15:17:42,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,149 | INFO     | time since job start (13700s) is within the limit (174528.0s)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,824 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 16:19:31] 2026-01-11 15:17:42,846 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2750.325078125001
[2026-01-11 16:19:31] 2026-01-11 15:17:42,871 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6963074087/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,871 | INFO     | extracted standard info from prmon json
[2026-01-11 16:19:31] 2026-01-11 15:17:42,872 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 16:19:31] 2026-01-11 15:17:42,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 16:19:31] 2026-01-11 15:17:42,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 16:19:31] 2026-01-11 15:17:42,872 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 16:19:31] 2026-01-11 15:17:42,876 | INFO     | fitting pss+swap vs Time
[2026-01-11 16:19:31] 2026-01-11 15:17:42,877 | INFO     | sum of square deviations: 3485088600.0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,878 | INFO     | sum of deviations: -1763635751.5
[2026-01-11 16:19:31] 2026-01-11 15:17:42,879 | INFO     | mean x: 1768137798.5
[2026-01-11 16:19:31] 2026-01-11 15:17:42,879 | INFO     | mean y: 2345002.1473214286
[2026-01-11 16:19:31] 2026-01-11 15:17:42,879 | INFO     | intersect: 897114516.7625606
[2026-01-11 16:19:31] 2026-01-11 15:17:42,879 | INFO     | chi2: 1.377340690183802
[2026-01-11 16:19:31] 2026-01-11 15:17:42,880 | INFO     | sum of square deviations: 3256879670.0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,881 | INFO     | sum of deviations: -1731802321.999999
[2026-01-11 16:19:31] 2026-01-11 15:17:42,881 | INFO     | mean x: 1768137646.0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,881 | INFO     | mean y: 2345023.378995434
[2026-01-11 16:19:31] 2026-01-11 15:17:42,881 | INFO     | intersect: 942528631.9918406
[2026-01-11 16:19:31] 2026-01-11 15:17:42,882 | INFO     | chi2: 1.377205032919812
[2026-01-11 16:19:31] 2026-01-11 15:17:42,882 | INFO     | current chi2=1.377205032919812 (change=0.009849216316392548 %)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,882 | INFO     | right removable region: 218
[2026-01-11 16:19:31] 2026-01-11 15:17:42,882 | INFO     | sum of square deviations: 3256879670.0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,884 | INFO     | sum of deviations: -27389919575.000004
[2026-01-11 16:19:31] 2026-01-11 15:17:42,884 | INFO     | mean x: 1768137951.0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,884 | INFO     | mean y: 2361896.9452054794
[2026-01-11 16:19:31] 2026-01-11 15:17:42,884 | INFO     | intersect: 14872164033.477716
[2026-01-11 16:19:31] 2026-01-11 15:17:42,884 | INFO     | chi2: 0.11069595020718846
[2026-01-11 16:19:31] 2026-01-11 15:17:42,885 | INFO     | current chi2=0.11069595020718846 (change=91.96306687255304 %)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,885 | INFO     | sum of square deviations: 3038856977.5
[2026-01-11 16:19:31] 2026-01-11 15:17:42,886 | INFO     | sum of deviations: -23332257311.5
[2026-01-11 16:19:31] 2026-01-11 15:17:42,887 | INFO     | mean x: 1768138103.5
[2026-01-11 16:19:31] 2026-01-11 15:17:42,887 | INFO     | mean y: 2359055.3971962617
[2026-01-11 16:19:31] 2026-01-11 15:17:42,887 | INFO     | intersect: 13578073048.712177
[2026-01-11 16:19:31] 2026-01-11 15:17:42,887 | INFO     | chi2: 0.10665159626227533
[2026-01-11 16:19:31] 2026-01-11 15:17:42,887 | INFO     | current chi2=0.10665159626227533 (change=3.653569924955122 %)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,887 | INFO     | left removable region: 20
[2026-01-11 16:19:31] 2026-01-11 15:17:42,888 | INFO     | sum of square deviations: 2406926989.5
[2026-01-11 16:19:31] 2026-01-11 15:17:42,889 | INFO     | sum of deviations: -13012489561.0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,889 | INFO     | mean x: 1768138225.5
[2026-01-11 16:19:31] 2026-01-11 15:17:42,889 | INFO     | mean y: 2351715.4343434344
[2026-01-11 16:19:31] 2026-01-11 15:17:42,889 | INFO     | intersect: 9561378766.148218
[2026-01-11 16:19:31] 2026-01-11 15:17:42,889 | INFO     | chi2: 0.08273152656451929
[2026-01-11 16:19:31] 2026-01-11 15:17:42,890 | INFO     | current memory leak: -5.41 B/s (using 198 data points, chi2=0.08)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,890 | INFO     | could have reported an average CPU frequency of 2708 MHz (11 samples)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,890 | INFO     | ..............................
[2026-01-11 16:19:31] 2026-01-11 15:17:42,890 | INFO     | . Timing measurements:
[2026-01-11 16:19:31] 2026-01-11 15:17:42,890 | INFO     | . get job = 0 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,890 | INFO     | . initial setup = 1 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,891 | INFO     | . payload setup = 8 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,891 | INFO     | . stage-in = 0 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,891 | INFO     | . payload execution = 13661 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,891 | INFO     | . stage-out = 1 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,891 | INFO     | . log creation = 0 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,891 | INFO     | ..............................
[2026-01-11 16:19:31] 2026-01-11 15:17:42,986 | INFO     | 
[2026-01-11 16:19:31] 2026-01-11 15:17:42,986 | INFO     | job summary report
[2026-01-11 16:19:31] 2026-01-11 15:17:42,986 | INFO     | --------------------------------------------------
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | PanDA job id: 6963074087
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | task id: 47898826
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | errors: (none)
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | pilot state: finished 
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | transexitcode: 0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | exeerrorcode: 0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | exeerrordiag: 
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | exitcode: 0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | exitmsg: OK
[2026-01-11 16:19:31] 2026-01-11 15:17:42,987 | INFO     | cpuconsumptiontime: 53385 s
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | nevents: 400
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | neventsw: 0
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | pid: 2229362
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | pgrp: 2229362
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | corecount: 4
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | event service: False
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | sizes: {0: 2283980, 7: 2284242, 11: 2284270, 13673: 2315267, 13675: 2324343, 13682: 2324481}
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | --------------------------------------------------
[2026-01-11 16:19:31] 2026-01-11 15:17:42,988 | INFO     | 
[2026-01-11 16:19:31] 2026-01-11 15:17:42,989 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-11 16:19:31] 2026-01-11 15:17:43,016 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 16:19:31] 2026-01-11 15:17:43,018 | INFO     | job 6963074087 has completed (purged errors)
[2026-01-11 16:19:31] 2026-01-11 15:17:43,019 | INFO     | overall cleanup function is called
[2026-01-11 16:19:31] 2026-01-11 15:17:44,027 | INFO     | --- collectZombieJob: --- 10, [2229362]
[2026-01-11 16:19:31] 2026-01-11 15:17:44,028 | INFO     | zombie collector waiting for pid 2229362
[2026-01-11 16:19:31] 2026-01-11 15:17:44,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 16:19:31] 2026-01-11 15:17:44,028 | INFO     | collected zombie processes
[2026-01-11 16:19:31] 2026-01-11 15:17:44,028 | INFO     | will attempt to kill all subprocesses of pid=2229362
[2026-01-11 16:19:31] 2026-01-11 15:17:44,711 | INFO     | process IDs to be killed: [2229362] (in reverse order)
[2026-01-11 16:19:31] 2026-01-11 15:17:44,950 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 16:19:31] 2026-01-11 15:17:44,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 16:19:31] 2026-01-11 15:17:44,982 | INFO     | did not find any defunct processes belonging to 2229362
[2026-01-11 16:19:31] 2026-01-11 15:17:45,012 | INFO     | did not find any defunct processes belonging to 2229362
[2026-01-11 16:19:31] 2026-01-11 15:17:45,012 | INFO     | ready for new job
[2026-01-11 16:19:31] 2026-01-11 15:17:45,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 16:19:31] 2026-01-11 15:17:45,015 | INFO     | ***************************************
[2026-01-11 16:19:31] 2026-01-11 15:17:45,015 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 16:19:31] 2026-01-11 15:17:45,015 | INFO     | ***************************************
[2026-01-11 16:19:31] 2026-01-11 15:17:45,015 | INFO     | 
[2026-01-11 16:19:31] 2026-01-11 15:17:45,023 | INFO     | architecture information:
[2026-01-11 16:19:31] 2026-01-11 15:17:45,023 | INFO     | executing command: cat /etc/os-release
[2026-01-11 16:19:31] 2026-01-11 15:17:45,045 | INFO     | cat /etc/os-release:
[2026-01-11 16:19:31] NAME="CentOS Linux"
[2026-01-11 16:19:31] VERSION="7 (Core)"
[2026-01-11 16:19:31] ID="centos"
[2026-01-11 16:19:31] ID_LIKE="rhel fedora"
[2026-01-11 16:19:31] VERSION_ID="7"
[2026-01-11 16:19:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 16:19:31] ANSI_COLOR="0;31"
[2026-01-11 16:19:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 16:19:31] HOME_URL="https://www.centos.org/"
[2026-01-11 16:19:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 16:19:31] 
[2026-01-11 16:19:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 16:19:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 16:19:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 16:19:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 16:19:31] 
[2026-01-11 16:19:31] 2026-01-11 15:17:45,046 | INFO     | ***************************************
[2026-01-11 16:19:31] 2026-01-11 15:17:45,549 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-11 16:19:31] 2026-01-11 15:17:45,575 | INFO     | sufficient remaining disk space (3351587586048 B)
[2026-01-11 16:19:31] 2026-01-11 15:17:45,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 16:19:31] 2026-01-11 15:17:45,576 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 16:19:31] 2026-01-11 15:17:45,576 | INFO     | update_server=False
[2026-01-11 16:19:31] 2026-01-11 15:17:45,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 16:19:31] 2026-01-11 15:17:45,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:19:31] 2026-01-11 15:17:45,655 | INFO     | aborting loop
[2026-01-11 16:19:31] 2026-01-11 15:17:45,742 | INFO     | all job control threads have been joined
[2026-01-11 16:19:31] 2026-01-11 15:17:45,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 16:19:31] 2026-01-11 15:17:46,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 16:19:31] 2026-01-11 15:17:46,180 | INFO     | all data control threads have been joined
[2026-01-11 16:19:31] 2026-01-11 15:17:46,581 | INFO     | [job] retrieve thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:46,660 | INFO     | [job] job monitor thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:46,693 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:46,709 | INFO     | [payload] failed_post thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:46,744 | INFO     | [job] control thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:46,890 | INFO     | all payload control threads have been joined
[2026-01-11 16:19:31] 2026-01-11 15:17:47,182 | INFO     | [data] control thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:47,194 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:47,282 | INFO     | [data] copytool_in thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:47,295 | INFO     | [job] validate thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:47,797 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:47,895 | INFO     | [payload] control thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:47,951 | INFO     | [data] copytool_out thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:47,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:19:31] 2026-01-11 15:17:47,999 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:48,099 | INFO     | [payload] validate_post thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:49,003 | INFO     | [job] queue monitor thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:17:50,034 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 16:19:31] 2026-01-11 15:18:16,249 | INFO     | PID=2212635 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 16:19:31] 2026-01-11 15:18:16,250 | INFO     | .. there are 6 such processes running
[2026-01-11 16:19:31] 2026-01-11 15:18:16,250 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 16:19:31] 2026-01-11 15:18:16,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 16:19:31] 2026-01-11 15:18:16,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 16:19:31] 2026-01-11 15:18:44,019 | INFO     | [monitor] cgroup control has ended
[2026-01-11 16:19:31] 2026-01-11 15:18:45,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22684076459840)>', '<ExcThread(monitor, started 22683834083072)>']
[2026-01-11 16:19:31] 2026-01-11 15:18:45,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 16:19:31] 2026-01-11 15:18:45,396 | INFO     | [monitor] control thread has ended
[2026-01-11 16:19:31] 2026-01-11 15:18:50,378 | INFO     | all workflow threads have been joined
[2026-01-11 16:19:31] 2026-01-11 15:18:50,379 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 16:19:31] 2026-01-11 15:18:50,379 | INFO     | traces error code: 0
[2026-01-11 16:19:31] 2026-01-11 15:18:50,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 16:19:31] 2026-01-11 15:18:50,649 [wrapper] ==== pilot stdout END ====
[2026-01-11 16:19:31] 2026-01-11 15:18:50,654 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 16:19:31] 2026-01-11 15:18:50,659 [wrapper] pilotpid: 2212635
[2026-01-11 16:19:31] 2026-01-11 15:18:50,664 [wrapper] Pilot exit status: 0
[2026-01-11 16:19:31] 2026-01-11 15:18:50,682 [wrapper] pandaids: 6963074087
[2026-01-11 16:19:31] 2026-01-11 15:18:50,875 [wrapper] cleanup supervisor_pilot 2599821 2212636
[2026-01-11 16:19:31] 2026-01-11 15:18:50,881 [wrapper] Test setup, not cleaning
[2026-01-11 16:19:31] 2026-01-11 15:18:50,886 [wrapper] apfmon messages muted
[2026-01-11 16:19:31] 2026-01-11 15:18:50,891 [wrapper] ==== wrapper stdout END ====
[2026-01-11 16:19:31] 2026-01-11 15:18:50,895 [wrapper] ==== wrapper stderr END ====
[2026-01-11 16:19:31]  *** Error codes and diagnostics ***
[2026-01-11 16:19:31]     "exeErrorCode": 0,
[2026-01-11 16:19:31]     "exeErrorDiag": "",
[2026-01-11 16:19:31]     "pilotErrorCode": 0,
[2026-01-11 16:19:31]     "pilotErrorDiag": "",
[2026-01-11 16:19:31]  *** Listing of results directory ***
[2026-01-11 16:19:31] total 444148
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-11 16:19:31] -rwx------ 1 boinc boinc     36322 Jan  8 12:09 runpilot2-wrapper.sh
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:12 queuedata.json
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc       100 Jan 11 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 16:19:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 12:29 run_atlas
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc       105 Jan 11 12:29 job.xml
[2026-01-11 16:19:31] -rw-r--r-- 2 boinc boinc 223907940 Jan 11 12:29 EVNT.47898824._000908.pool.root.1
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc      6689 Jan 11 12:29 init_data.xml
[2026-01-11 16:19:31] -rw-r--r-- 2 boinc boinc     15847 Jan 11 12:29 start_atlas.sh
[2026-01-11 16:19:31] drwxrwx--x 2 boinc boinc      4096 Jan 11 12:29 shared
[2026-01-11 16:19:31] -rw-r--r-- 2 boinc boinc    592403 Jan 11 12:29 input.tar.gz
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc         0 Jan 11 12:29 boinc_lockfile
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc      2519 Jan 11 12:29 pandaJob.out
[2026-01-11 16:19:31] -rw------- 1 boinc boinc    989548 Jan 11 12:29 agis_schedconf.cvmfs.json
[2026-01-11 16:19:31] drwx------ 5 boinc boinc      4096 Jan 11 12:29 pilot3
[2026-01-11 16:19:31] -rw------- 1 boinc boinc 222411604 Jan 11 16:16 HITS.47898826._022784.pool.root.1
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc       529 Jan 11 16:17 boinc_task_state.xml
[2026-01-11 16:19:31] -rw------- 1 boinc boinc      1025 Jan 11 16:17 memory_monitor_summary.json
[2026-01-11 16:19:31] -rw------- 1 boinc boinc   1516240 Jan 11 16:17 agis_ddmendpoints.agis.ALL.json
[2026-01-11 16:19:31] -rw------- 1 boinc boinc    388547 Jan 11 16:17 log.47898826._022784.job.log.tgz.1
[2026-01-11 16:19:31] -rw------- 1 boinc boinc        95 Jan 11 16:17 pilot_heartbeat.json
[2026-01-11 16:19:31] -rw------- 1 boinc boinc      7786 Jan 11 16:17 heartbeat.json
[2026-01-11 16:19:31] -rw------- 1 boinc boinc      4835 Jan 11 16:18 pilotlog.txt
[2026-01-11 16:19:31] -rw------- 1 boinc boinc   1896868 Jan 11 16:18 log.47898826._022784.job.log.1
[2026-01-11 16:19:31] -rw------- 1 boinc boinc       357 Jan 11 16:18 output.list
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc       620 Jan 11 16:18 runtime_log
[2026-01-11 16:19:31] -rw------- 1 boinc boinc   2304000 Jan 11 16:18 result.tar.gz
[2026-01-11 16:19:31] -rw------- 1 boinc boinc       666 Jan 11 16:18 w5rMDmy42x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxJkKDm5bK0un.diag
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc      9206 Jan 11 16:18 runtime_log.err
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc        26 Jan 11 16:19 wrapper_checkpoint.txt
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc      8192 Jan 11 16:19 boinc_mmap_file
[2026-01-11 16:19:31] -rw-r--r-- 1 boinc boinc     21120 Jan 11 16:19 stderr.txt
[2026-01-11 16:19:31] HITS file was successfully produced:
[2026-01-11 16:19:31] -rw------- 1 boinc boinc 222411604 Jan 11 16:16 shared/HITS.pool.root.1
[2026-01-11 16:19:31]  *** Contents of shared directory: ***
[2026-01-11 16:19:31] total 438720
[2026-01-11 16:19:31] -rw-r--r-- 2 boinc boinc 223907940 Jan 11 12:29 ATLAS.root_0
[2026-01-11 16:19:31] -rw-r--r-- 2 boinc boinc     15847 Jan 11 12:29 start_atlas.sh
[2026-01-11 16:19:31] -rw-r--r-- 2 boinc boinc    592403 Jan 11 12:29 input.tar.gz
[2026-01-11 16:19:31] -rw------- 1 boinc boinc 222411604 Jan 11 16:16 HITS.pool.root.1
[2026-01-11 16:19:31] -rw------- 1 boinc boinc   2304000 Jan 11 16:18 result.tar.gz
16:19:32 (2204198): run_atlas exited; CPU time 54327.031908
16:19:32 (2204198): called boinc_finish(0)

</stderr_txt>
]]>

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