Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:35 (948242): wrapper (7.7.26015): starting
01:43:35 (948242): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 01:43:35] Arguments: --nthreads 4
[2026-01-11 01:43:35] Threads: 4
[2026-01-11 01:43:35] Checking for CVMFS
[2026-01-11 01:43:35] No cvmfs_config command found, will try listing directly
[2026-01-11 01:43:35] CVMFS is ok
[2026-01-11 01:43:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 01:43:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 01:43:35] Further information can be found at the LHC@home message board.
[2026-01-11 01:43:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 01:43:35] Checking for apptainer binary...
[2026-01-11 01:43:35] which: no apptainer in ((null))
[2026-01-11 01:43:35] apptainer is not installed, using version from CVMFS
[2026-01-11 01:43:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 01:43:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-11 01:43:35] apptainer works
[2026-01-11 01:43:35] Set ATHENA_PROC_NUMBER=4
[2026-01-11 01:43:35] Set ATHENA_CORE_NUMBER=4
[2026-01-11 01:43:35] Starting ATLAS job with PandaID=6963077939
[2026-01-11 01:43:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 05:20:04]  *** The last 200 lines of the pilot log: ***
[2026-01-11 05:20:04] 2026-01-11 04:18:22,216 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2735.909960937499
[2026-01-11 05:20:04] 2026-01-11 04:18:22,241 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6963077939/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,242 | INFO     | extracted standard info from prmon json
[2026-01-11 05:20:04] 2026-01-11 04:18:22,242 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 05:20:04] 2026-01-11 04:18:22,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 05:20:04] 2026-01-11 04:18:22,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 05:20:04] 2026-01-11 04:18:22,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 05:20:04] 2026-01-11 04:18:22,247 | INFO     | fitting pss+swap vs Time
[2026-01-11 05:20:04] 2026-01-11 04:18:22,247 | INFO     | sum of square deviations: 2912836010.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,248 | INFO     | sum of deviations: -2914969302.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,249 | INFO     | mean x: 1768098669.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,249 | INFO     | mean y: 2329634.1184834125
[2026-01-11 05:20:04] 2026-01-11 04:18:22,249 | INFO     | intersect: 1771723216.6435971
[2026-01-11 05:20:04] 2026-01-11 04:18:22,249 | INFO     | chi2: 2.0692423847615276
[2026-01-11 05:20:04] 2026-01-11 04:18:22,250 | INFO     | sum of square deviations: 2710627567.5
[2026-01-11 05:20:04] 2026-01-11 04:18:22,251 | INFO     | sum of deviations: 10039961696.000004
[2026-01-11 05:20:04] 2026-01-11 04:18:22,251 | INFO     | mean x: 1768098516.5
[2026-01-11 05:20:04] 2026-01-11 04:18:22,251 | INFO     | mean y: 2339217.0873786407
[2026-01-11 05:20:04] 2026-01-11 04:18:22,251 | INFO     | intersect: -6546565395.723998
[2026-01-11 05:20:04] 2026-01-11 04:18:22,251 | INFO     | chi2: 1.3123437642677849
[2026-01-11 05:20:04] 2026-01-11 04:18:22,251 | INFO     | current chi2=1.3123437642677849 (change=36.57853840940787 %)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,252 | INFO     | sum of square deviations: 2518000700.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,253 | INFO     | sum of deviations: 9846078564.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,253 | INFO     | mean x: 1768098364.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,253 | INFO     | mean y: 2339063.542288557
[2026-01-11 05:20:04] 2026-01-11 04:18:22,253 | INFO     | intersect: -6911414137.886078
[2026-01-11 05:20:04] 2026-01-11 04:18:22,254 | INFO     | chi2: 1.3129920207694976
[2026-01-11 05:20:04] 2026-01-11 04:18:22,254 | INFO     | current chi2=1.3129920207694976 (change=-0.04939685159965932 %)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,254 | INFO     | right removable region: 200
[2026-01-11 05:20:04] 2026-01-11 04:18:22,254 | INFO     | sum of square deviations: 2710627567.5
[2026-01-11 05:20:04] 2026-01-11 04:18:22,256 | INFO     | sum of deviations: -27833782201.5
[2026-01-11 05:20:04] 2026-01-11 04:18:22,256 | INFO     | mean x: 1768098821.5
[2026-01-11 05:20:04] 2026-01-11 04:18:22,256 | INFO     | mean y: 2348175.8883495145
[2026-01-11 05:20:04] 2026-01-11 04:18:22,256 | INFO     | intersect: 18157877212.195114
[2026-01-11 05:20:04] 2026-01-11 04:18:22,256 | INFO     | chi2: 0.8139771787781604
[2026-01-11 05:20:04] 2026-01-11 04:18:22,256 | INFO     | current chi2=0.8139771787781604 (change=60.66303373773352 %)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,257 | INFO     | sum of square deviations: 2518000700.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,258 | INFO     | sum of deviations: -25532170919.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,258 | INFO     | mean x: 1768098974.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,258 | INFO     | mean y: 2346349.800995025
[2026-01-11 05:20:04] 2026-01-11 04:18:22,258 | INFO     | intersect: 17930619843.083397
[2026-01-11 05:20:04] 2026-01-11 04:18:22,259 | INFO     | chi2: 0.8134109279219289
[2026-01-11 05:20:04] 2026-01-11 04:18:22,259 | INFO     | current chi2=0.8134109279219289 (change=0.0695659375956344 %)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,259 | INFO     | left removable region: 20
[2026-01-11 05:20:04] 2026-01-11 04:18:22,259 | INFO     | sum of square deviations: 1808350185.0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,260 | INFO     | sum of deviations: -7101504557.5
[2026-01-11 05:20:04] 2026-01-11 04:18:22,260 | INFO     | mean x: 1768098943.5
[2026-01-11 05:20:04] 2026-01-11 04:18:22,260 | INFO     | mean y: 2352253.0166666666
[2026-01-11 05:20:04] 2026-01-11 04:18:22,260 | INFO     | intersect: 6945787661.450119
[2026-01-11 05:20:04] 2026-01-11 04:18:22,261 | INFO     | chi2: 0.029981863619587927
[2026-01-11 05:20:04] 2026-01-11 04:18:22,261 | INFO     | current memory leak: -3.93 B/s (using 180 data points, chi2=0.03)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,261 | INFO     | could have reported an average CPU frequency of 2736 MHz (11 samples)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | ..............................
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . Timing measurements:
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . get job = 0 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . initial setup = 1 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . payload setup = 8 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . stage-in = 0 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . payload execution = 12831 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . stage-out = 1 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | . log creation = 0 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,262 | INFO     | ..............................
[2026-01-11 05:20:04] 2026-01-11 04:18:22,359 | INFO     | 
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | job summary report
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | --------------------------------------------------
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | PanDA job id: 6963077939
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | task id: 47898826
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | errors: (none)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | pilot state: finished 
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | transexitcode: 0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | exeerrorcode: 0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | exeerrordiag: 
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | exitcode: 0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,360 | INFO     | exitmsg: OK
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | cpuconsumptiontime: 50215 s
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | nevents: 400
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | neventsw: 0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | pid: 972444
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | pgrp: 972444
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | corecount: 4
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | event service: False
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | sizes: {0: 2283980, 7: 2284242, 11: 2284270, 12844: 2314958, 12846: 2323978, 12848: 2324034, 12855: 2324356}
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | --------------------------------------------------
[2026-01-11 05:20:04] 2026-01-11 04:18:22,361 | INFO     | 
[2026-01-11 05:20:04] 2026-01-11 04:18:22,362 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-11 05:20:04] 2026-01-11 04:18:22,397 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,399 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,399 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 05:20:04] 2026-01-11 04:18:22,399 | INFO     | job 6963077939 has completed (purged errors)
[2026-01-11 05:20:04] 2026-01-11 04:18:22,399 | INFO     | overall cleanup function is called
[2026-01-11 05:20:04] 2026-01-11 04:18:23,409 | INFO     | --- collectZombieJob: --- 10, [972444]
[2026-01-11 05:20:04] 2026-01-11 04:18:23,409 | INFO     | zombie collector waiting for pid 972444
[2026-01-11 05:20:04] 2026-01-11 04:18:23,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 05:20:04] 2026-01-11 04:18:23,410 | INFO     | collected zombie processes
[2026-01-11 05:20:04] 2026-01-11 04:18:23,410 | INFO     | will attempt to kill all subprocesses of pid=972444
[2026-01-11 05:20:04] 2026-01-11 04:18:24,081 | INFO     | process IDs to be killed: [972444] (in reverse order)
[2026-01-11 05:20:04] 2026-01-11 04:18:24,315 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 05:20:04] 2026-01-11 04:18:24,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 05:20:04] 2026-01-11 04:18:24,344 | INFO     | did not find any defunct processes belonging to 972444
[2026-01-11 05:20:04] 2026-01-11 04:18:24,373 | INFO     | did not find any defunct processes belonging to 972444
[2026-01-11 05:20:04] 2026-01-11 04:18:24,374 | INFO     | ready for new job
[2026-01-11 05:20:04] 2026-01-11 04:18:24,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 05:20:04] 2026-01-11 04:18:24,376 | INFO     | ***************************************
[2026-01-11 05:20:04] 2026-01-11 04:18:24,376 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 05:20:04] 2026-01-11 04:18:24,376 | INFO     | ***************************************
[2026-01-11 05:20:04] 2026-01-11 04:18:24,377 | INFO     | 
[2026-01-11 05:20:04] 2026-01-11 04:18:24,384 | INFO     | architecture information:
[2026-01-11 05:20:04] 2026-01-11 04:18:24,385 | INFO     | executing command: cat /etc/os-release
[2026-01-11 05:20:04] 2026-01-11 04:18:24,408 | INFO     | cat /etc/os-release:
[2026-01-11 05:20:04] NAME="CentOS Linux"
[2026-01-11 05:20:04] VERSION="7 (Core)"
[2026-01-11 05:20:04] ID="centos"
[2026-01-11 05:20:04] ID_LIKE="rhel fedora"
[2026-01-11 05:20:04] VERSION_ID="7"
[2026-01-11 05:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 05:20:04] ANSI_COLOR="0;31"
[2026-01-11 05:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 05:20:04] HOME_URL="https://www.centos.org/"
[2026-01-11 05:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 05:20:04] 
[2026-01-11 05:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 05:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 05:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 05:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 05:20:04] 
[2026-01-11 05:20:04] 2026-01-11 04:18:24,409 | INFO     | ***************************************
[2026-01-11 05:20:04] 2026-01-11 04:18:24,912 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-11 05:20:04] 2026-01-11 04:18:24,939 | INFO     | sufficient remaining disk space (3340254576640 B)
[2026-01-11 05:20:04] 2026-01-11 04:18:24,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 05:20:04] 2026-01-11 04:18:24,940 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 05:20:04] 2026-01-11 04:18:24,940 | INFO     | update_server=False
[2026-01-11 05:20:04] 2026-01-11 04:18:24,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 05:20:04] 2026-01-11 04:18:24,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 05:20:04] 2026-01-11 04:18:24,956 | INFO     | all payload control threads have been joined
[2026-01-11 05:20:04] 2026-01-11 04:18:25,436 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 05:20:04] 2026-01-11 04:18:25,436 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 05:20:04] 2026-01-11 04:18:25,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:20:04] 2026-01-11 04:18:25,436 | INFO     | will abort loop
[2026-01-11 05:20:04] 2026-01-11 04:18:25,623 | INFO     | all data control threads have been joined
[2026-01-11 05:20:04] 2026-01-11 04:18:25,881 | INFO     | all job control threads have been joined
[2026-01-11 05:20:04] 2026-01-11 04:18:25,945 | INFO     | [job] retrieve thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:25,959 | INFO     | [payload] control thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:25,964 | INFO     | [payload] validate_post thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,078 | INFO     | [data] copytool_in thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,082 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,124 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 05:20:04] 2026-01-11 04:18:26,244 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,297 | INFO     | [payload] failed_post thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,442 | INFO     | [job] job monitor thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,629 | INFO     | [data] control thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,886 | INFO     | [job] control thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:26,943 | INFO     | [data] copytool_out thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:27,317 | INFO     | [job] validate thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:27,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:20:04] 2026-01-11 04:18:28,375 | INFO     | [job] queue monitor thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:30,168 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:35,718 | INFO     | job.realtimelogging is not enabled
[2026-01-11 05:20:04] 2026-01-11 04:18:36,720 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 05:20:04] 2026-01-11 04:18:55,533 | INFO     | PID=955143 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 05:20:04] 2026-01-11 04:18:55,533 | INFO     | .. there are 6 such processes running
[2026-01-11 05:20:04] 2026-01-11 04:18:55,533 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 05:20:04] 2026-01-11 04:18:55,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 05:20:04] 2026-01-11 04:18:55,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 05:20:04] 2026-01-11 04:19:09,484 | INFO     | [monitor] cgroup control has ended
[2026-01-11 05:20:04] 2026-01-11 04:19:11,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23295748065088)>', '<ExcThread(monitor, started 23294895978240)>']
[2026-01-11 05:20:04] 2026-01-11 04:19:11,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 05:20:04] 2026-01-11 04:19:11,614 | INFO     | [monitor] control thread has ended
[2026-01-11 05:20:04] 2026-01-11 04:19:16,547 | INFO     | all workflow threads have been joined
[2026-01-11 05:20:04] 2026-01-11 04:19:16,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 05:20:04] 2026-01-11 04:19:16,547 | INFO     | traces error code: 0
[2026-01-11 05:20:04] 2026-01-11 04:19:16,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 05:20:04] 2026-01-11 04:19:16,709 [wrapper] ==== pilot stdout END ====
[2026-01-11 05:20:04] 2026-01-11 04:19:16,714 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 05:20:04] 2026-01-11 04:19:16,719 [wrapper] pilotpid: 955143
[2026-01-11 05:20:04] 2026-01-11 04:19:16,722 [wrapper] Pilot exit status: 0
[2026-01-11 05:20:04] 2026-01-11 04:19:16,739 [wrapper] pandaids: 6963077939
[2026-01-11 05:20:04] 2026-01-11 04:19:16,905 [wrapper] cleanup supervisor_pilot 1320718 955144
[2026-01-11 05:20:04] 2026-01-11 04:19:16,909 [wrapper] Test setup, not cleaning
[2026-01-11 05:20:04] 2026-01-11 04:19:16,913 [wrapper] apfmon messages muted
[2026-01-11 05:20:04] 2026-01-11 04:19:16,918 [wrapper] ==== wrapper stdout END ====
[2026-01-11 05:20:04] 2026-01-11 04:19:16,923 [wrapper] ==== wrapper stderr END ====
[2026-01-11 05:20:04]  *** Error codes and diagnostics ***
[2026-01-11 05:20:04]     "exeErrorCode": 0,
[2026-01-11 05:20:04]     "exeErrorDiag": "",
[2026-01-11 05:20:04]     "pilotErrorCode": 0,
[2026-01-11 05:20:04]     "pilotErrorDiag": "",
[2026-01-11 05:20:04]  *** Listing of results directory ***
[2026-01-11 05:20:04] total 444248
[2026-01-11 05:20:04] -rwx------ 1 boinc boinc     36322 Jan  8 12:07 runpilot2-wrapper.sh
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:09 queuedata.json
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc       100 Jan 11 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 05:20:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 01:43 run_atlas
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc       105 Jan 11 01:43 job.xml
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc      6688 Jan 11 01:43 init_data.xml
[2026-01-11 05:20:04] -rw-r--r-- 2 boinc boinc 223727659 Jan 11 01:43 EVNT.47898824._000993.pool.root.1
[2026-01-11 05:20:04] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:43 start_atlas.sh
[2026-01-11 05:20:04] drwxrwx--x 2 boinc boinc      4096 Jan 11 01:43 shared
[2026-01-11 05:20:04] -rw-r--r-- 2 boinc boinc    592398 Jan 11 01:43 input.tar.gz
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc         0 Jan 11 01:43 boinc_lockfile
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc      2519 Jan 11 01:43 pandaJob.out
[2026-01-11 05:20:04] -rw------- 1 boinc boinc    989540 Jan 11 01:43 agis_schedconf.cvmfs.json
[2026-01-11 05:20:04] drwx------ 5 boinc boinc      4096 Jan 11 01:43 pilot3
[2026-01-11 05:20:04] -rw------- 1 boinc boinc 222912597 Jan 11 05:17 HITS.47898826._024316.pool.root.1
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc       528 Jan 11 05:17 boinc_task_state.xml
[2026-01-11 05:20:04] -rw------- 1 boinc boinc        95 Jan 11 05:18 pilot_heartbeat.json
[2026-01-11 05:20:04] -rw------- 1 boinc boinc      1031 Jan 11 05:18 memory_monitor_summary.json
[2026-01-11 05:20:04] -rw------- 1 boinc boinc   1516240 Jan 11 05:18 agis_ddmendpoints.agis.ALL.json
[2026-01-11 05:20:04] -rw------- 1 boinc boinc    389317 Jan 11 05:18 log.47898826._024316.job.log.tgz.1
[2026-01-11 05:20:04] -rw------- 1 boinc boinc      7787 Jan 11 05:18 heartbeat.json
[2026-01-11 05:20:04] -rw------- 1 boinc boinc      5091 Jan 11 05:19 pilotlog.txt
[2026-01-11 05:20:04] -rw------- 1 boinc boinc   1787785 Jan 11 05:19 log.47898826._024316.job.log.1
[2026-01-11 05:20:04] -rw------- 1 boinc boinc       357 Jan 11 05:19 output.list
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc       620 Jan 11 05:19 runtime_log
[2026-01-11 05:20:04] -rw------- 1 boinc boinc   2191360 Jan 11 05:19 result.tar.gz
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc      9206 Jan 11 05:19 runtime_log.err
[2026-01-11 05:20:04] -rw------- 1 boinc boinc       666 Jan 11 05:19 g34KDmw22x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfHkKDmlK3Zqn.diag
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc        26 Jan 11 05:19 wrapper_checkpoint.txt
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc      8192 Jan 11 05:20 boinc_mmap_file
[2026-01-11 05:20:04] -rw-r--r-- 1 boinc boinc     20846 Jan 11 05:20 stderr.txt
[2026-01-11 05:20:04] HITS file was successfully produced:
[2026-01-11 05:20:04] -rw------- 1 boinc boinc 222912597 Jan 11 05:17 shared/HITS.pool.root.1
[2026-01-11 05:20:04]  *** Contents of shared directory: ***
[2026-01-11 05:20:04] total 438924
[2026-01-11 05:20:04] -rw-r--r-- 2 boinc boinc 223727659 Jan 11 01:43 ATLAS.root_0
[2026-01-11 05:20:04] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:43 start_atlas.sh
[2026-01-11 05:20:04] -rw-r--r-- 2 boinc boinc    592398 Jan 11 01:43 input.tar.gz
[2026-01-11 05:20:04] -rw------- 1 boinc boinc 222912597 Jan 11 05:17 HITS.pool.root.1
[2026-01-11 05:20:04] -rw------- 1 boinc boinc   2191360 Jan 11 05:19 result.tar.gz
05:20:05 (948242): run_atlas exited; CPU time 51117.104588
05:20:05 (948242): called boinc_finish(0)

</stderr_txt>
]]>

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