Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:30:39 (26198): wrapper (7.7.26015): starting
02:30:39 (26198): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 02:30:39] Arguments: --nthreads 8
[2026-01-09 02:30:39] Threads: 8
[2026-01-09 02:30:39] Checking for CVMFS
[2026-01-09 02:30:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:30:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:30:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:30:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:30:39] 2.11.2.0 18344 34740 96088 154926 3 61 14511688 25165824 94 130560 0 13190709 99.777 13853360 3554 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 02:30:39] CVMFS is ok
[2026-01-09 02:30:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:30:39] Checking for apptainer binary...
[2026-01-09 02:30:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 02:30:39] Running /usr/bin/apptainer --version
[2026-01-09 02:30:39] apptainer version 1.3.2-1.el7
[2026-01-09 02:30:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:30:41] cg-vwn430.simple-grid.lan
[2026-01-09 02:30:41] apptainer works
[2026-01-09 02:30:41] Set ATHENA_PROC_NUMBER=8
[2026-01-09 02:30:41] Set ATHENA_CORE_NUMBER=8
[2026-01-09 02:30:41] Starting ATLAS job with PandaID=6963078412
[2026-01-09 02:30:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:49:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:49:32] 2026-01-09 05:48:46,873 | INFO     | time since job start (15467s) is within the limit (174528.0s)
[2026-01-09 06:49:32] 2026-01-09 05:48:48,589 | INFO     | monitor loop #1048: job 0:6963078412 is in state 'finished'
[2026-01-09 06:49:32] 2026-01-09 05:48:48,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:49:32] 2026-01-09 05:48:48,878 | INFO     | time since job start (15469s) is within the limit (174528.0s)
[2026-01-09 06:49:32] 2026-01-09 05:48:50,883 | INFO     | time since job start (15471s) is within the limit (174528.0s)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,092 | INFO     | monitor loop #1049: job 0:6963078412 is in state 'finished'
[2026-01-09 06:49:32] 2026-01-09 05:48:51,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,305 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:49:32] 2026-01-09 05:48:51,307 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 06:49:32] 2026-01-09 05:48:51,308 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963078412/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,309 | INFO     | extracted standard info from prmon json
[2026-01-09 06:49:32] 2026-01-09 05:48:51,310 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:49:32] 2026-01-09 05:48:51,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:49:32] 2026-01-09 05:48:51,310 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:49:32] 2026-01-09 05:48:51,310 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:49:32] 2026-01-09 05:48:51,316 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:49:32] 2026-01-09 05:48:51,316 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,318 | INFO     | sum of deviations: -15934814608.999998
[2026-01-09 06:49:32] 2026-01-09 05:48:51,319 | INFO     | mean x: 1767929981.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,319 | INFO     | mean y: 2530689.4940711465
[2026-01-09 06:49:32] 2026-01-09 05:48:51,319 | INFO     | intersect: 5612737529.071967
[2026-01-09 06:49:32] 2026-01-09 05:48:51,320 | INFO     | chi2: 1.7565799340543073
[2026-01-09 06:49:32] 2026-01-09 05:48:51,320 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,322 | INFO     | sum of deviations: -15503642453.000006
[2026-01-09 06:49:32] 2026-01-09 05:48:51,323 | INFO     | mean x: 1767929828.5
[2026-01-09 06:49:32] 2026-01-09 05:48:51,323 | INFO     | mean y: 2530914.806451613
[2026-01-09 06:49:32] 2026-01-09 05:48:51,323 | INFO     | intersect: 5797783404.337933
[2026-01-09 06:49:32] 2026-01-09 05:48:51,323 | INFO     | chi2: 1.7557611022055446
[2026-01-09 06:49:32] 2026-01-09 05:48:51,324 | INFO     | current chi2=1.7557611022055446 (change=0.04661512026229438 %)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,324 | INFO     | right removable region: 247
[2026-01-09 06:49:32] 2026-01-09 05:48:51,324 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,326 | INFO     | sum of deviations: -55580773084.5
[2026-01-09 06:49:32] 2026-01-09 05:48:51,327 | INFO     | mean x: 1767930133.5
[2026-01-09 06:49:32] 2026-01-09 05:48:51,327 | INFO     | mean y: 2551220.931451613
[2026-01-09 06:49:32] 2026-01-09 05:48:51,327 | INFO     | intersect: 20778615306.09098
[2026-01-09 06:49:32] 2026-01-09 05:48:51,327 | INFO     | chi2: 0.2542189329070568
[2026-01-09 06:49:32] 2026-01-09 05:48:51,327 | INFO     | current chi2=0.2542189329070568 (change=85.52761943942386 %)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,328 | INFO     | sum of square deviations: 4449281562.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,330 | INFO     | sum of deviations: -58373705023.99999
[2026-01-09 06:49:32] 2026-01-09 05:48:51,330 | INFO     | mean x: 1767930286.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,330 | INFO     | mean y: 2552720.744855967
[2026-01-09 06:49:32] 2026-01-09 05:48:51,330 | INFO     | intersect: 23197452746.70998
[2026-01-09 06:49:32] 2026-01-09 05:48:51,331 | INFO     | chi2: 0.22369258558138713
[2026-01-09 06:49:32] 2026-01-09 05:48:51,331 | INFO     | current chi2=0.22369258558138713 (change=12.007896885016905 %)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,331 | INFO     | left removable region: 20
[2026-01-09 06:49:32] 2026-01-09 05:48:51,332 | INFO     | sum of square deviations: 3627000098.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,333 | INFO     | sum of deviations: -41735767265.99999
[2026-01-09 06:49:32] 2026-01-09 05:48:51,334 | INFO     | mean x: 1767930408.0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,334 | INFO     | mean y: 2544308.374449339
[2026-01-09 06:49:32] 2026-01-09 05:48:51,334 | INFO     | intersect: 20346059626.022068
[2026-01-09 06:49:32] 2026-01-09 05:48:51,334 | INFO     | chi2: 0.1981145346757334
[2026-01-09 06:49:32] 2026-01-09 05:48:51,335 | INFO     | current memory leak: -11.51 B/s (using 227 data points, chi2=0.20)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,335 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | ..............................
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | . Timing measurements:
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | . get job = 0 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | . initial setup = 2 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | . payload setup = 8 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | . stage-in = 0 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | . payload execution = 15431 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,336 | INFO     | . stage-out = 1 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,337 | INFO     | . log creation = 0 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,337 | INFO     | ..............................
[2026-01-09 06:49:32] 2026-01-09 05:48:51,452 | INFO     | 
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | job summary report
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | --------------------------------------------------
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | PanDA job id: 6963078412
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | task id: 47898826
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | errors: (none)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | pilot state: finished 
[2026-01-09 06:49:32] 2026-01-09 05:48:51,453 | INFO     | transexitcode: 0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | exeerrorcode: 0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | exeerrordiag: 
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | exitcode: 0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | exitmsg: OK
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | cpuconsumptiontime: 80798 s
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | nevents: 400
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | neventsw: 0
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | pid: 3992
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | pgrp: 3992
[2026-01-09 06:49:32] 2026-01-09 05:48:51,454 | INFO     | corecount: 8
[2026-01-09 06:49:32] 2026-01-09 05:48:51,455 | INFO     | event service: False
[2026-01-09 06:49:32] 2026-01-09 05:48:51,455 | INFO     | sizes: {0: 2283798, 1: 2283997, 2: 2283997, 7: 2284287, 12: 2284315, 15443: 2314997, 15444: 2315124, 15445: 2324178, 15446: 2324234, 15454: 2324428}
[2026-01-09 06:49:32] 2026-01-09 05:48:51,455 | INFO     | --------------------------------------------------
[2026-01-09 06:49:32] 2026-01-09 05:48:51,455 | INFO     | 
[2026-01-09 06:49:32] 2026-01-09 05:48:51,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 06:49:32] 2026-01-09 05:48:51,490 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,491 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,491 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,491 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,493 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,493 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,493 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:49:32] 2026-01-09 05:48:51,493 | INFO     | job 6963078412 has completed (purged errors)
[2026-01-09 06:49:32] 2026-01-09 05:48:51,493 | INFO     | overall cleanup function is called
[2026-01-09 06:49:32] 2026-01-09 05:48:52,502 | INFO     | --- collectZombieJob: --- 10, [3992]
[2026-01-09 06:49:32] 2026-01-09 05:48:52,502 | INFO     | zombie collector waiting for pid 3992
[2026-01-09 06:49:32] 2026-01-09 05:48:52,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:49:32] 2026-01-09 05:48:52,503 | INFO     | collected zombie processes
[2026-01-09 06:49:32] 2026-01-09 05:48:52,503 | INFO     | will attempt to kill all subprocesses of pid=3992
[2026-01-09 06:49:32] 2026-01-09 05:48:52,571 | INFO     | process IDs to be killed: [3992] (in reverse order)
[2026-01-09 06:49:32] 2026-01-09 05:48:52,645 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:49:32] 2026-01-09 05:48:52,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:49:32] 2026-01-09 05:48:52,647 | INFO     | did not find any defunct processes belonging to 3992
[2026-01-09 06:49:32] 2026-01-09 05:48:52,649 | INFO     | did not find any defunct processes belonging to 3992
[2026-01-09 06:49:32] 2026-01-09 05:48:52,649 | INFO     | ready for new job
[2026-01-09 06:49:32] 2026-01-09 05:48:52,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:49:32] 2026-01-09 05:48:52,651 | INFO     | ***************************************
[2026-01-09 06:49:32] 2026-01-09 05:48:52,652 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:49:32] 2026-01-09 05:48:52,652 | INFO     | ***************************************
[2026-01-09 06:49:32] 2026-01-09 05:48:52,652 | INFO     | 
[2026-01-09 06:49:32] 2026-01-09 05:48:52,653 | INFO     | pilot is running in a VM
[2026-01-09 06:49:32] 2026-01-09 05:48:52,653 | INFO     | architecture information:
[2026-01-09 06:49:32] 2026-01-09 05:48:52,653 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:49:32] 2026-01-09 05:48:52,680 | INFO     | cat /etc/os-release:
[2026-01-09 06:49:32] NAME="CentOS Linux"
[2026-01-09 06:49:32] VERSION="7 (Core)"
[2026-01-09 06:49:32] ID="centos"
[2026-01-09 06:49:32] ID_LIKE="rhel fedora"
[2026-01-09 06:49:32] VERSION_ID="7"
[2026-01-09 06:49:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:49:32] ANSI_COLOR="0;31"
[2026-01-09 06:49:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:49:32] HOME_URL="https://www.centos.org/"
[2026-01-09 06:49:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:49:32] 
[2026-01-09 06:49:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:49:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:49:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:49:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:49:32] 
[2026-01-09 06:49:32] 2026-01-09 05:48:52,681 | INFO     | ***************************************
[2026-01-09 06:49:32] 2026-01-09 05:48:53,184 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 06:49:32] 2026-01-09 05:48:53,267 | INFO     | sufficient remaining disk space (498141757440 B)
[2026-01-09 06:49:32] 2026-01-09 05:48:53,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:49:32] 2026-01-09 05:48:53,268 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:49:32] 2026-01-09 05:48:53,268 | INFO     | update_server=False
[2026-01-09 06:49:32] 2026-01-09 05:48:53,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:49:32] 2026-01-09 05:48:53,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:49:32] 2026-01-09 05:48:53,316 | INFO     | all data control threads have been joined
[2026-01-09 06:49:32] 2026-01-09 05:48:53,596 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 06:49:32] 2026-01-09 05:48:53,596 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 06:49:32] 2026-01-09 05:48:53,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:49:32] 2026-01-09 05:48:53,597 | INFO     | will abort loop
[2026-01-09 06:49:32] 2026-01-09 05:48:53,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:49:32] 2026-01-09 05:48:53,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:49:32] 2026-01-09 05:48:54,117 | INFO     | all payload control threads have been joined
[2026-01-09 06:49:32] 2026-01-09 05:48:54,274 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:54,275 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:54,322 | INFO     | [data] control thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:54,552 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:54,557 | INFO     | all job control threads have been joined
[2026-01-09 06:49:32] 2026-01-09 05:48:54,602 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:54,650 | INFO     | [job] validate thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,058 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,123 | INFO     | [payload] control thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,141 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,253 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,334 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,452 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,519 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,563 | INFO     | [job] control thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:55,617 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:48:57,727 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:49:32] 2026-01-09 05:49:24,005 | INFO     | PID=29937 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:49:32] 2026-01-09 05:49:24,005 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:49:32] 2026-01-09 05:49:24,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:49:32] 2026-01-09 05:49:24,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:49:32] 2026-01-09 05:49:25,651 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:49:32] 2026-01-09 05:49:27,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622024648512)>', '<ExcThread(monitor, started 140621440341760)>']
[2026-01-09 06:49:32] 2026-01-09 05:49:28,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:49:32] 2026-01-09 05:49:28,025 | INFO     | [monitor] control thread has ended
[2026-01-09 06:49:32] 2026-01-09 05:49:32,199 | INFO     | all workflow threads have been joined
[2026-01-09 06:49:32] 2026-01-09 05:49:32,199 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:49:32] 2026-01-09 05:49:32,199 | INFO     | traces error code: 0
[2026-01-09 06:49:32] 2026-01-09 05:49:32,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:49:32] 2026-01-09 05:49:32,373 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:49:32] 2026-01-09 05:49:32,381 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:49:32] 2026-01-09 05:49:32,385 [wrapper] pilotpid: 29937
[2026-01-09 06:49:32] 2026-01-09 05:49:32,394 [wrapper] Pilot exit status: 0
[2026-01-09 06:49:32] 2026-01-09 05:49:32,436 [wrapper] pandaids: 6963078412
[2026-01-09 06:49:32] 2026-01-09 05:49:32,484 [wrapper] cleanup supervisor_pilot 11625 29938
[2026-01-09 06:49:32] 2026-01-09 05:49:32,496 [wrapper] Test setup, not cleaning
[2026-01-09 06:49:32] 2026-01-09 05:49:32,507 [wrapper] apfmon messages muted
[2026-01-09 06:49:32] 2026-01-09 05:49:32,511 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:49:32] 2026-01-09 05:49:32,520 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:49:32]  *** Error codes and diagnostics ***
[2026-01-09 06:49:32]     "exeErrorCode": 0,
[2026-01-09 06:49:32]     "exeErrorDiag": "",
[2026-01-09 06:49:32]     "pilotErrorCode": 0,
[2026-01-09 06:49:32]     "pilotErrorDiag": "",
[2026-01-09 06:49:32]  *** Listing of results directory ***
[2026-01-09 06:49:32] total 441688
[2026-01-09 06:49:32] -rwx------. 1 boinc boinc     36322 Jan  8 12:07 runpilot2-wrapper.sh
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:09 queuedata.json
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc       100 Jan  9 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:49:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 02:30 run_atlas
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc       105 Jan  9 02:30 job.xml
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc      6389 Jan  9 02:30 init_data.xml
[2026-01-09 06:49:32] -rw-r--r--. 2 boinc boinc 223844686 Jan  9 02:30 EVNT.47898824._000967.pool.root.1
[2026-01-09 06:49:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:30 start_atlas.sh
[2026-01-09 06:49:32] drwxrwx--x. 2 boinc boinc        68 Jan  9 02:30 shared
[2026-01-09 06:49:32] -rw-r--r--. 2 boinc boinc    592394 Jan  9 02:30 input.tar.gz
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc         0 Jan  9 02:30 boinc_lockfile
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc      2519 Jan  9 02:30 pandaJob.out
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc    989821 Jan  9 02:30 agis_schedconf.cvmfs.json
[2026-01-09 06:49:32] drwx------. 5 boinc boinc      4096 Jan  9 02:30 pilot3
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc 219439472 Jan  9 06:47 HITS.47898826._024571.pool.root.1
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc       531 Jan  9 06:48 boinc_task_state.xml
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc        95 Jan  9 06:48 pilot_heartbeat.json
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc      1031 Jan  9 06:48 memory_monitor_summary.json
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc   1516240 Jan  9 06:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc    480499 Jan  9 06:48 log.47898826._024571.job.log.tgz.1
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc      7778 Jan  9 06:48 heartbeat.json
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc      8192 Jan  9 06:49 boinc_mmap_file
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc        28 Jan  9 06:49 wrapper_checkpoint.txt
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc      4995 Jan  9 06:49 pilotlog.txt
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc   2070515 Jan  9 06:49 log.47898826._024571.job.log.1
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc       357 Jan  9 06:49 output.list
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc       620 Jan  9 06:49 runtime_log
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc   2570240 Jan  9 06:49 result.tar.gz
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc      8817 Jan  9 06:49 runtime_log.err
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc       657 Jan  9 06:49 kJ3LDm722x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrHkKDm4C657m.diag
[2026-01-09 06:49:32] -rw-r--r--. 1 boinc boinc     20994 Jan  9 06:49 stderr.txt
[2026-01-09 06:49:32] HITS file was successfully produced:
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc 219439472 Jan  9 06:47 shared/HITS.pool.root.1
[2026-01-09 06:49:32]  *** Contents of shared directory: ***
[2026-01-09 06:49:32] total 436008
[2026-01-09 06:49:32] -rw-r--r--. 2 boinc boinc 223844686 Jan  9 02:30 ATLAS.root_0
[2026-01-09 06:49:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:30 start_atlas.sh
[2026-01-09 06:49:32] -rw-r--r--. 2 boinc boinc    592394 Jan  9 02:30 input.tar.gz
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc 219439472 Jan  9 06:47 HITS.pool.root.1
[2026-01-09 06:49:32] -rw-------. 1 boinc boinc   2570240 Jan  9 06:49 result.tar.gz
06:49:33 (26198): run_atlas exited; CPU time 80926.267092
06:49:33 (26198): called boinc_finish(0)

</stderr_txt>
]]>

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