Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 12:11:36 (22788): vboxwrapper version 26210
2026-01-08 12:11:36 (22788): BOINC client version: 8.2.8
2026-01-08 12:11:37 (22788): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2026-01-08 12:11:37 (22788): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 12:11:38 (22788): Create VM. (boinc_a5174413095feccb, slot#9)
2026-01-08 12:11:38 (22788): Setting Memory Size for VM. (4300MB)
2026-01-08 12:11:39 (22788): Setting CPU Count for VM. (3)
2026-01-08 12:11:39 (22788): Setting Chipset Options for VM.
2026-01-08 12:11:39 (22788): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 12:11:39 (22788): Setting Boot Options for VM.
2026-01-08 12:11:40 (22788): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 12:11:40 (22788): Enabling VM Network Access.
2026-01-08 12:11:41 (22788): Disabling USB Support for VM.
2026-01-08 12:11:41 (22788): Disabling COM Port Support for VM.
2026-01-08 12:11:41 (22788): Disabling LPT Port Support for VM.
2026-01-08 12:11:41 (22788): Disabling Audio Support for VM.
2026-01-08 12:11:42 (22788): Disabling Clipboard Support for VM.
2026-01-08 12:11:42 (22788): Disabling Drag and Drop Support for VM.
2026-01-08 12:11:42 (22788): Adding storage controller(s) to VM.
2026-01-08 12:11:43 (22788): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 12:11:45 (22788): Adding VirtualBox Guest Additions to VM.
2026-01-08 12:11:45 (22788): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 12:11:45 (22788): forwarding host port 64502 to guest port 80
2026-01-08 12:11:46 (22788): Enabling remote desktop for VM.
2026-01-08 12:11:46 (22788): Enabling shared directory for VM.
2026-01-08 12:11:47 (22788): Starting VM using VBoxManage interface. (boinc_a5174413095feccb, slot#9)
2026-01-08 12:11:57 (22788): Successfully started VM. (PID = '15888')
2026-01-08 12:11:57 (22788): Reporting VM Process ID to BOINC.
2026-01-08 12:11:57 (22788): Guest Log: BIOS: VirtualBox 7.1.10
2026-01-08 12:11:57 (22788): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 12:11:57 (22788): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 12:11:57 (22788): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 12:11:57 (22788): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 12:11:57 (22788): Detected: Web Application Enabled (http://localhost:64502)
2026-01-08 12:11:57 (22788): Detected: Remote Desktop Enabled (localhost:64503)
2026-01-08 12:11:57 (22788): Preference change detected
2026-01-08 12:11:57 (22788): Setting CPU throttle for VM. (100%)
2026-01-08 12:11:57 (22788): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 12:11:59 (22788): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 12:11:59 (22788): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 12:12:02 (22788): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 12:12:02 (22788): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 12:12:02 (22788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 12:12:08 (22788): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 12:12:08 (22788): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 12:12:20 (22788): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.000197 main     Log opened 2026-01-08T12:12:18.899113000Z
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.000480 main     OS Product: Linux
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.000559 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.000637 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.000703 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.000705 main     Process ID: 1297
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.000706 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 12:12:20 (22788): Guest Log: 00:00:00.002129 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 12:12:20 (22788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 12:12:20 (22788): Guest Log: [INFO] Mounting shared directory
2026-01-08 12:12:20 (22788): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 12:12:29 (22788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 12:12:29 (22788): Guest Log: [INFO] Detected branch: prod
2026-01-08 12:12:29 (22788): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 12:12:29 (22788): Guest Log: Copying input files
2026-01-08 12:12:30 (22788): Guest Log: 00:00:10.013140 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 810 675 642 000ns (GuestNow=1 767 903 149 578 779 000 ns GuestLast=1 767 874 338 903 137 000 ns fSetTimeLastLoop=true )
2026-01-08 12:12:33 (22788): Guest Log: Copied input files into RunAtlas.
2026-01-08 12:12:33 (22788): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-08 12:12:33 (22788): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-08 12:12:33 (22788): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-08 12:12:33 (22788): Guest Log: Further information can be found at the LHC@home message board.
2026-01-08 12:12:42 (22788): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 12:12:43 (22788): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 12:12:43 (22788): Guest Log: 2.6.3.0 1578 0 30140 154918 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-08 12:12:47 (22788): Guest Log: copied the webapp to /var/www
2026-01-08 12:12:47 (22788): Guest Log: ATHENA_PROC_NUMBER=3
2026-01-08 12:12:47 (22788): Guest Log: ATHENA_CORE_NUMBER=3
2026-01-08 12:12:47 (22788): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 12:12:47 (22788): Guest Log:  *** Starting ATLAS job. (PandaID=6963078063 taskID=47898826) ***
2026-01-08 14:07:03 (22788): Status Report: Elapsed Time: '6000.595045'
2026-01-08 14:07:04 (22788): Status Report: CPU Time: '18209.531250'
2026-01-08 16:04:29 (22788): Status Report: Elapsed Time: '12001.119844'
2026-01-08 16:04:30 (22788): Status Report: CPU Time: '38981.015625'
2026-01-08 17:47:52 (22788): Status Report: Elapsed Time: '18001.581350'
2026-01-08 17:47:52 (22788): Status Report: CPU Time: '57302.671875'
2026-01-08 19:28:29 (22788): Status Report: Elapsed Time: '24001.766109'
2026-01-08 19:28:29 (22788): Status Report: CPU Time: '75229.015625'
2026-01-08 21:08:34 (22788): Status Report: Elapsed Time: '30001.766109'
2026-01-08 21:08:34 (22788): Status Report: CPU Time: '93114.234375'
2026-01-08 22:48:37 (22788): Status Report: Elapsed Time: '36001.766109'
2026-01-08 22:48:37 (22788): Status Report: CPU Time: '111003.734375'
2026-01-09 00:22:13 (22788): Guest Log:  *** Job finished ***
2026-01-09 00:22:13 (22788): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:00,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:00,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:06,187 | INFO     | [monitor] cgroup control has ended
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:07,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496987359040)>', '<ExcThread(monitor, started 140496533960448)>']
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:07,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:07,184 | INFO     | [monitor] control thread has ended
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,099 | INFO     | all workflow threads have been joined
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,099 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,099 | INFO     | traces error code: 0
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,213 [wrapper] ==== pilot stdout END ====
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,219 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,226 [wrapper] pilotpid: 5971
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,233 [wrapper] Pilot exit status: 0
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,369 [wrapper] pandaids: 6963078063
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,420 [wrapper] cleanup supervisor_pilot 28803 5972
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,432 [wrapper] Test setup, not cleaning
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,438 [wrapper] apfmon messages muted
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,443 [wrapper] ==== wrapper stdout END ====
2026-01-09 00:22:13 (22788): Guest Log: 2026-01-09 08:22:12,449 [wrapper] ==== wrapper stderr END ====
2026-01-09 00:22:13 (22788): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 00:22:13 (22788): Guest Log:     "exeErrorCode": 0,
2026-01-09 00:22:13 (22788): Guest Log:     "exeErrorDiag": "",
2026-01-09 00:22:13 (22788): Guest Log:     "pilotErrorCode": 0,
2026-01-09 00:22:13 (22788): Guest Log:     "pilotErrorDiag": "",
2026-01-09 00:22:13 (22788): Guest Log:  *** Listing of results directory ***
2026-01-09 00:22:13 (22788): Guest Log: total 233292
2026-01-09 00:22:13 (22788): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 11:07 runpilot2-wrapper.sh
2026-01-09 00:22:13 (22788): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 11:09 queuedata.json
2026-01-09 00:22:13 (22788): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 11:09 pilot3.tar.gz
2026-01-09 00:22:13 (22788): Guest Log: -rwxr-xr-x. 1 atlas atlas      8641 Jan  8 20:12 init_data.xml
2026-01-09 00:22:13 (22788): Guest Log: -rwxr-xr-x. 1 atlas atlas    592403 Jan  8 20:12 input.tar.gz
2026-01-09 00:22:13 (22788): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  8 20:12 start_atlas.sh
2026-01-09 00:22:13 (22788): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 20:12 EVNT.47898824._000998.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 00:22:13 (22788): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan  8 20:12 pandaJob.out
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas    989845 Jan  8 20:14 agis_schedconf.cvmfs.json
2026-01-09 00:22:13 (22788): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 20:14 pilot3
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas 221979021 Jan  9 08:20 HITS.47898826._024440.pool.root.1
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas      1031 Jan  9 08:21 memory_monitor_summary.json
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  9 08:21 agis_ddmendpoints.agis.ALL.json
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas    774669 Jan  9 08:21 log.47898826._024440.job.log.tgz.1
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas      7792 Jan  9 08:21 heartbeat.json
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas        95 Jan  9 08:22 pilot_heartbeat.json
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas      4805 Jan  9 08:22 pilotlog.txt
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas   5757330 Jan  9 08:22 log.47898826._024440.job.log.1
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas       357 Jan  9 08:22 output.list
2026-01-09 00:22:13 (22788): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  9 08:22 runtime_log
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas   6553600 Jan  9 08:22 result.tar.gz
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas       658 Jan  9 08:22 wIzMDmy22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmp4eKDmuRLURm.diag
2026-01-09 00:22:13 (22788): Guest Log: -rw-r--r--. 1 atlas atlas      8731 Jan  9 08:22 runtime_log.err
2026-01-09 00:22:13 (22788): Guest Log: Looking for outputfile HITS.47898826._024440.pool.root.1
2026-01-09 00:22:13 (22788): Guest Log: HITS file was successfully produced
2026-01-09 00:22:13 (22788): Guest Log: -rw-------. 1 atlas atlas 221979021 Jan  9 08:20 /home/atlas/RunAtlas/HITS.47898826._024440.pool.root.1
2026-01-09 00:22:15 (22788): Guest Log: Successfully finished the ATLAS job!
2026-01-09 00:22:15 (22788): Guest Log: Copying the results back to the shared directory!
2026-01-09 00:22:15 (22788): Guest Log:  *** Contents of shared directory: ***
2026-01-09 00:22:15 (22788): Guest Log: total 444952
2026-01-09 00:22:15 (22788): Guest Log: -rwxrwxrwx. 1 root root 226468320 Jan  8 20:11 ATLAS.root_0
2026-01-09 00:22:15 (22788): Guest Log: -rwxrwxrwx. 1 root root 221979021 Jan  9 08:22 HITS.pool.root.1
2026-01-09 00:22:15 (22788): Guest Log: -rwxrwxrwx. 1 root root      8641 Jan  8 20:11 init_data.xml
2026-01-09 00:22:15 (22788): Guest Log: -rwxrwxrwx. 1 root root    592403 Jan  8 19:41 input.tar.gz
2026-01-09 00:22:15 (22788): Guest Log: -rwxrwxrwx. 1 root root   6553600 Jan  9 08:22 result.tar.gz
2026-01-09 00:22:15 (22788): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 19:41 start_atlas.sh
2026-01-09 00:22:15 (22788): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 00:22:15 (22788): VM Completion File Detected.
2026-01-09 00:22:15 (22788): Powering off VM.
2026-01-09 00:22:17 (22788): Successfully stopped VM.
2026-01-09 00:22:17 (22788): Deregistering VM. (boinc_a5174413095feccb, slot#9)
2026-01-09 00:22:17 (22788): Removing network bandwidth throttle group from VM.
2026-01-09 00:22:18 (22788): Removing VM from VirtualBox.
2026-01-09 00:22:23 (22788): called boinc_finish(0)

</stderr_txt>
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