Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:40:44 (3752): wrapper (7.7.26015): starting
14:40:44 (3752): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 14:40:44] Arguments: --nthreads 8
[2026-01-08 14:40:44] Threads: 8
[2026-01-08 14:40:44] Checking for CVMFS
[2026-01-08 14:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 14:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 14:40:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 14:40:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 14:40:45] 2.11.2.0 2878 119849 82864 154918 3 82 18088879 20275200 1 130560 0 25836146 99.789 7448163 33548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 14:40:45] CVMFS is ok
[2026-01-08 14:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 14:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 14:40:45] Further information can be found at the LHC@home message board.
[2026-01-08 14:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 14:40:45] Checking for apptainer binary...
[2026-01-08 14:40:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 14:40:45] Running /usr/bin/apptainer --version
[2026-01-08 14:40:45] apptainer version 1.3.2-1.el7
[2026-01-08 14:40:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 14:40:47] c-204-27.aglt2.org
[2026-01-08 14:40:47] apptainer works
[2026-01-08 14:40:47] Set ATHENA_PROC_NUMBER=8
[2026-01-08 14:40:47] Set ATHENA_CORE_NUMBER=8
[2026-01-08 14:40:47] Starting ATLAS job with PandaID=6963147266
[2026-01-08 14:40:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:40:28]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:40:28] 2026-01-08 22:39:35,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:40:28] 2026-01-08 22:39:36,869 | INFO     | time since job start (10711s) is within the limit (349056.0s)
[2026-01-08 17:40:28] 2026-01-08 22:39:37,620 | INFO     | monitor loop #789: job 0:6963147266 is in state 'finished'
[2026-01-08 17:40:28] 2026-01-08 22:39:37,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:40:28] 2026-01-08 22:39:38,874 | INFO     | time since job start (10713s) is within the limit (349056.0s)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,122 | INFO     | monitor loop #790: job 0:6963147266 is in state 'finished'
[2026-01-08 17:40:28] 2026-01-08 22:39:40,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,414 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 17:40:28] 2026-01-08 22:39:40,417 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-08 17:40:28] 2026-01-08 22:39:40,419 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963147266/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,420 | INFO     | extracted standard info from prmon json
[2026-01-08 17:40:28] 2026-01-08 22:39:40,420 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:40:28] 2026-01-08 22:39:40,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:40:28] 2026-01-08 22:39:40,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:40:28] 2026-01-08 22:39:40,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:40:28] 2026-01-08 22:39:40,425 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:40:28] 2026-01-08 22:39:40,426 | INFO     | sum of square deviations: 1661798600.0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,427 | INFO     | sum of deviations: -3302904718.999996
[2026-01-08 17:40:28] 2026-01-08 22:39:40,427 | INFO     | mean x: 1767906604.0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,427 | INFO     | mean y: 2533883.0457142857
[2026-01-08 17:40:28] 2026-01-08 22:39:40,427 | INFO     | intersect: 3516333368.1956344
[2026-01-08 17:40:28] 2026-01-08 22:39:40,427 | INFO     | chi2: 1.688675485704541
[2026-01-08 17:40:28] 2026-01-08 22:39:40,428 | INFO     | sum of square deviations: 1523386702.5
[2026-01-08 17:40:28] 2026-01-08 22:39:40,429 | INFO     | sum of deviations: -3039065048.500003
[2026-01-08 17:40:28] 2026-01-08 22:39:40,429 | INFO     | mean x: 1767906451.5
[2026-01-08 17:40:28] 2026-01-08 22:39:40,429 | INFO     | mean y: 2534173.6764705884
[2026-01-08 17:40:28] 2026-01-08 22:39:40,429 | INFO     | intersect: 3529401447.070775
[2026-01-08 17:40:28] 2026-01-08 22:39:40,429 | INFO     | chi2: 1.6886435076408524
[2026-01-08 17:40:28] 2026-01-08 22:39:40,429 | INFO     | current chi2=1.6886435076408524 (change=0.001893677261220872 %)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,429 | INFO     | right removable region: 169
[2026-01-08 17:40:28] 2026-01-08 22:39:40,430 | INFO     | sum of square deviations: 1523386702.5
[2026-01-08 17:40:28] 2026-01-08 22:39:40,431 | INFO     | sum of deviations: -30486554471.5
[2026-01-08 17:40:28] 2026-01-08 22:39:40,431 | INFO     | mean x: 1767906756.5
[2026-01-08 17:40:28] 2026-01-08 22:39:40,431 | INFO     | mean y: 2563442.0411764705
[2026-01-08 17:40:28] 2026-01-08 22:39:40,431 | INFO     | intersect: 35382539874.89319
[2026-01-08 17:40:28] 2026-01-08 22:39:40,431 | INFO     | chi2: 0.17011758432698748
[2026-01-08 17:40:28] 2026-01-08 22:39:40,432 | INFO     | current chi2=0.17011758432698748 (change=89.92597537140111 %)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,432 | INFO     | sum of square deviations: 1392881930.0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,433 | INFO     | sum of deviations: -27817957428.999996
[2026-01-08 17:40:28] 2026-01-08 22:39:40,433 | INFO     | mean x: 1767906909.0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,433 | INFO     | mean y: 2560272.2606060607
[2026-01-08 17:40:28] 2026-01-08 22:39:40,433 | INFO     | intersect: 35310333367.57025
[2026-01-08 17:40:28] 2026-01-08 22:39:40,433 | INFO     | chi2: 0.15883449960036772
[2026-01-08 17:40:28] 2026-01-08 22:39:40,434 | INFO     | current chi2=0.15883449960036772 (change=6.63252113016856 %)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,434 | INFO     | left removable region: 20
[2026-01-08 17:40:28] 2026-01-08 22:39:40,434 | INFO     | sum of square deviations: 1025693650.0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,435 | INFO     | sum of deviations: -16236034195.0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,435 | INFO     | mean x: 1767907031.0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,435 | INFO     | mean y: 2547101.765100671
[2026-01-08 17:40:28] 2026-01-08 22:39:40,435 | INFO     | intersect: 27987315271.96575
[2026-01-08 17:40:28] 2026-01-08 22:39:40,435 | INFO     | chi2: 0.12965100155426626
[2026-01-08 17:40:28] 2026-01-08 22:39:40,436 | INFO     | current memory leak: -15.83 B/s (using 149 data points, chi2=0.13)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,436 | INFO     | could have reported an average CPU frequency of 2012 MHz (9 samples)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,436 | INFO     | ..............................
[2026-01-08 17:40:28] 2026-01-08 22:39:40,436 | INFO     | . Timing measurements:
[2026-01-08 17:40:28] 2026-01-08 22:39:40,436 | INFO     | . get job = 0 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,436 | INFO     | . initial setup = 2 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,437 | INFO     | . payload setup = 8 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,437 | INFO     | . stage-in = 0 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,437 | INFO     | . payload execution = 10673 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,437 | INFO     | . stage-out = 0 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,437 | INFO     | . log creation = 0 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,437 | INFO     | ..............................
[2026-01-08 17:40:28] 2026-01-08 22:39:40,525 | INFO     | 
[2026-01-08 17:40:28] 2026-01-08 22:39:40,525 | INFO     | job summary report
[2026-01-08 17:40:28] 2026-01-08 22:39:40,525 | INFO     | --------------------------------------------------
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | PanDA job id: 6963147266
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | task id: 47898826
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | errors: (none)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | pilot state: finished 
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | transexitcode: 0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | exeerrorcode: 0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | exeerrordiag: 
[2026-01-08 17:40:28] 2026-01-08 22:39:40,526 | INFO     | exitcode: 0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | exitmsg: OK
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | cpuconsumptiontime: 81053 s
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | nevents: 400
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | neventsw: 0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | pid: 13997
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | pgrp: 13997
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | corecount: 8
[2026-01-08 17:40:28] 2026-01-08 22:39:40,527 | INFO     | event service: False
[2026-01-08 17:40:28] 2026-01-08 22:39:40,528 | INFO     | sizes: {0: 2283970, 6: 2284232, 11: 2284260, 10685: 2313262, 10686: 2313261, 10688: 2322315, 10689: 2322499, 10698: 2322757}
[2026-01-08 17:40:28] 2026-01-08 22:39:40,528 | INFO     | --------------------------------------------------
[2026-01-08 17:40:28] 2026-01-08 22:39:40,528 | INFO     | 
[2026-01-08 17:40:28] 2026-01-08 22:39:40,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 17:40:28] 2026-01-08 22:39:40,556 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,557 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,557 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:40:28] 2026-01-08 22:39:40,562 | INFO     | job 6963147266 has completed (purged errors)
[2026-01-08 17:40:28] 2026-01-08 22:39:40,562 | INFO     | overall cleanup function is called
[2026-01-08 17:40:28] 2026-01-08 22:39:41,569 | INFO     | --- collectZombieJob: --- 10, [13997]
[2026-01-08 17:40:28] 2026-01-08 22:39:41,569 | INFO     | zombie collector waiting for pid 13997
[2026-01-08 17:40:28] 2026-01-08 22:39:41,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:40:28] 2026-01-08 22:39:41,570 | INFO     | collected zombie processes
[2026-01-08 17:40:28] 2026-01-08 22:39:41,570 | INFO     | will attempt to kill all subprocesses of pid=13997
[2026-01-08 17:40:28] 2026-01-08 22:39:41,660 | INFO     | process IDs to be killed: [13997] (in reverse order)
[2026-01-08 17:40:28] 2026-01-08 22:39:41,720 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:40:28] 2026-01-08 22:39:41,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:40:28] 2026-01-08 22:39:41,726 | INFO     | did not find any defunct processes belonging to 13997
[2026-01-08 17:40:28] 2026-01-08 22:39:41,729 | INFO     | did not find any defunct processes belonging to 13997
[2026-01-08 17:40:28] 2026-01-08 22:39:41,730 | INFO     | ready for new job
[2026-01-08 17:40:28] 2026-01-08 22:39:41,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:40:28] 2026-01-08 22:39:41,732 | INFO     | ***************************************
[2026-01-08 17:40:28] 2026-01-08 22:39:41,732 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:40:28] 2026-01-08 22:39:41,732 | INFO     | ***************************************
[2026-01-08 17:40:28] 2026-01-08 22:39:41,732 | INFO     | 
[2026-01-08 17:40:28] 2026-01-08 22:39:41,733 | INFO     | architecture information:
[2026-01-08 17:40:28] 2026-01-08 22:39:41,734 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:40:28] 2026-01-08 22:39:41,751 | INFO     | cat /etc/os-release:
[2026-01-08 17:40:28] NAME="CentOS Linux"
[2026-01-08 17:40:28] VERSION="7 (Core)"
[2026-01-08 17:40:28] ID="centos"
[2026-01-08 17:40:28] ID_LIKE="rhel fedora"
[2026-01-08 17:40:28] VERSION_ID="7"
[2026-01-08 17:40:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:40:28] ANSI_COLOR="0;31"
[2026-01-08 17:40:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:40:28] HOME_URL="https://www.centos.org/"
[2026-01-08 17:40:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:40:28] 
[2026-01-08 17:40:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:40:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:40:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:40:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:40:28] 
[2026-01-08 17:40:28] 2026-01-08 22:39:41,751 | INFO     | ***************************************
[2026-01-08 17:40:28] 2026-01-08 22:39:42,255 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 17:40:28] 2026-01-08 22:39:42,275 | INFO     | sufficient remaining disk space (18498977792 B)
[2026-01-08 17:40:28] 2026-01-08 22:39:42,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:40:28] 2026-01-08 22:39:42,276 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:40:28] 2026-01-08 22:39:42,276 | INFO     | update_server=False
[2026-01-08 17:40:28] 2026-01-08 22:39:42,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:40:28] 2026-01-08 22:39:42,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:40:28] 2026-01-08 22:39:42,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:40:28] 2026-01-08 22:39:42,598 | INFO     | all payload control threads have been joined
[2026-01-08 17:40:28] 2026-01-08 22:39:42,626 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 17:40:28] 2026-01-08 22:39:42,626 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 17:40:28] 2026-01-08 22:39:42,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:40:28] 2026-01-08 22:39:42,626 | INFO     | will abort loop
[2026-01-08 17:40:28] 2026-01-08 22:39:43,250 | INFO     | all job control threads have been joined
[2026-01-08 17:40:28] 2026-01-08 22:39:43,282 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:43,282 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:43,315 | INFO     | all data control threads have been joined
[2026-01-08 17:40:28] 2026-01-08 22:39:43,599 | INFO     | [payload] control thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:43,631 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:43,671 | INFO     | [job] validate thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:43,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:40:28] 2026-01-08 22:39:43,704 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:43,996 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:44,255 | INFO     | [job] control thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:44,320 | INFO     | [data] control thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:44,406 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:44,454 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:44,456 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:44,456 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:45,692 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:46,444 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:39:52,922 | INFO     | job.realtimelogging is not enabled
[2026-01-08 17:40:28] 2026-01-08 22:39:53,927 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:40:28] 2026-01-08 22:40:12,080 | INFO     | PID=7590 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 17:40:28] 2026-01-08 22:40:12,080 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:40:28] 2026-01-08 22:40:12,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:40:28] 2026-01-08 22:40:12,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:40:28] 2026-01-08 22:40:22,674 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:40:28] 2026-01-08 22:40:23,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528631424832)>', '<ExcThread(monitor, started 140527840261888)>']
[2026-01-08 17:40:28] 2026-01-08 22:40:24,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:40:28] 2026-01-08 22:40:24,138 | INFO     | [monitor] control thread has ended
[2026-01-08 17:40:28] 2026-01-08 22:40:28,485 | INFO     | all workflow threads have been joined
[2026-01-08 17:40:28] 2026-01-08 22:40:28,485 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:40:28] 2026-01-08 22:40:28,490 | INFO     | traces error code: 0
[2026-01-08 17:40:28] 2026-01-08 22:40:28,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:40:28] 2026-01-08 22:40:28,602 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:40:28] 2026-01-08 22:40:28,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:40:28] 2026-01-08 22:40:28,613 [wrapper] pilotpid: 7590
[2026-01-08 17:40:28] 2026-01-08 22:40:28,617 [wrapper] Pilot exit status: 0
[2026-01-08 17:40:28] 2026-01-08 22:40:28,640 [wrapper] pandaids: 6963147266
[2026-01-08 17:40:28] 2026-01-08 22:40:28,690 [wrapper] cleanup supervisor_pilot 27086 7591
[2026-01-08 17:40:28] 2026-01-08 22:40:28,695 [wrapper] Test setup, not cleaning
[2026-01-08 17:40:28] 2026-01-08 22:40:28,700 [wrapper] apfmon messages muted
[2026-01-08 17:40:28] 2026-01-08 22:40:28,705 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:40:28] 2026-01-08 22:40:28,709 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:40:28]  *** Error codes and diagnostics ***
[2026-01-08 17:40:28]     "exeErrorCode": 0,
[2026-01-08 17:40:28]     "exeErrorDiag": "",
[2026-01-08 17:40:28]     "pilotErrorCode": 0,
[2026-01-08 17:40:28]     "pilotErrorDiag": "",
[2026-01-08 17:40:28]  *** Listing of results directory ***
[2026-01-08 17:40:28] total 442764
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-08 17:40:28] -rwx------ 1 boincer umatlas     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas       100 Jan  8 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:40:28] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 14:40 run_atlas
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas       105 Jan  8 14:40 job.xml
[2026-01-08 17:40:28] -rw-r--r-- 2 boincer umatlas 225356025 Jan  8 14:40 EVNT.47898824._001087.pool.root.1
[2026-01-08 17:40:28] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 14:40 start_atlas.sh
[2026-01-08 17:40:28] drwxrwx--x 2 boincer umatlas      4096 Jan  8 14:40 shared
[2026-01-08 17:40:28] -rw-r--r-- 2 boincer umatlas    592396 Jan  8 14:40 input.tar.gz
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas         0 Jan  8 14:40 boinc_lockfile
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 14:40 pandaJob.out
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas        57 Jan  8 14:40 setup.sh.local
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas    989845 Jan  8 14:41 agis_schedconf.cvmfs.json
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas   1516240 Jan  8 14:41 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:40:28] drwx------ 5 boincer umatlas      4096 Jan  8 14:41 pilot3
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas      5911 Jan  8 17:36 init_data.xml
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas 220321263 Jan  8 17:38 HITS.47898826._027461.pool.root.1
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas       531 Jan  8 17:39 boinc_task_state.xml
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas      1050 Jan  8 17:39 memory_monitor_summary.json
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas    414183 Jan  8 17:39 log.47898826._027461.job.log.tgz.1
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas        95 Jan  8 17:39 pilot_heartbeat.json
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas      7846 Jan  8 17:39 heartbeat.json
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 17:40 boinc_mmap_file
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas        28 Jan  8 17:40 wrapper_checkpoint.txt
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas      5003 Jan  8 17:40 pilotlog.txt
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas   1484791 Jan  8 17:40 log.47898826._027461.job.log.1
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas       357 Jan  8 17:40 output.list
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas       620 Jan  8 17:40 runtime_log
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas   1914880 Jan  8 17:40 result.tar.gz
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas      9343 Jan  8 17:40 runtime_log.err
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas       663 Jan  8 17:40 hIrKDmDm6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVokKDm6jycbn.diag
[2026-01-08 17:40:28] -rw-r--r-- 1 boincer umatlas     21291 Jan  8 17:40 stderr.txt
[2026-01-08 17:40:28] HITS file was successfully produced:
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas 220321263 Jan  8 17:38 shared/HITS.pool.root.1
[2026-01-08 17:40:28]  *** Contents of shared directory: ***
[2026-01-08 17:40:28] total 437708
[2026-01-08 17:40:28] -rw-r--r-- 2 boincer umatlas 225356025 Jan  8 14:40 ATLAS.root_0
[2026-01-08 17:40:28] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 14:40 start_atlas.sh
[2026-01-08 17:40:28] -rw-r--r-- 2 boincer umatlas    592396 Jan  8 14:40 input.tar.gz
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas 220321263 Jan  8 17:38 HITS.pool.root.1
[2026-01-08 17:40:28] -rw------- 1 boincer umatlas   1914880 Jan  8 17:40 result.tar.gz
17:40:30 (3752): run_atlas exited; CPU time 81011.002349
17:40:30 (3752): called boinc_finish(0)

</stderr_txt>
]]>

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