Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:16 (3494578): wrapper (7.7.26015): starting
10:30:16 (3494578): wrapper: running run_atlas (--nthreads 2)
[2026-01-09 10:30:16] Arguments: --nthreads 2
[2026-01-09 10:30:16] Threads: 2
[2026-01-09 10:30:16] Checking for CVMFS
[2026-01-09 10:30:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:30:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:30:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:30:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:30:17] 2.9.2.0 3288549 907 55176 154938 3 56 19721131 36864001 0 130560 0 430847 99.987 31383 2464 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 10:30:17] CVMFS is ok
[2026-01-09 10:30:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 10:30:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 10:30:17] Further information can be found at the LHC@home message board.
[2026-01-09 10:30:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:30:17] Checking for apptainer binary...
[2026-01-09 10:30:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:30:17] Running /usr/bin/apptainer --version
[2026-01-09 10:30:17] apptainer version 1.4.1-1.1
[2026-01-09 10:30:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:30:17] thA369
[2026-01-09 10:30:17] apptainer works
[2026-01-09 10:30:17] Set ATHENA_PROC_NUMBER=2
[2026-01-09 10:30:17] Set ATHENA_CORE_NUMBER=2
[2026-01-09 10:30:17] Starting ATLAS job with PandaID=6963146859
[2026-01-09 10:30:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:34:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:34:51] 2026-01-09 12:33:55,248 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:34:51] 2026-01-09 12:33:55,248 | INFO     | ***************************************
[2026-01-09 13:34:51] 2026-01-09 12:33:55,248 | INFO     | 
[2026-01-09 13:34:51] 2026-01-09 12:33:55,248 | INFO     | architecture information:
[2026-01-09 13:34:51] 2026-01-09 12:33:55,249 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:34:51] 2026-01-09 12:33:55,257 | INFO     | cat /etc/os-release:
[2026-01-09 13:34:51] NAME="CentOS Linux"
[2026-01-09 13:34:51] VERSION="7 (Core)"
[2026-01-09 13:34:51] ID="centos"
[2026-01-09 13:34:51] ID_LIKE="rhel fedora"
[2026-01-09 13:34:51] VERSION_ID="7"
[2026-01-09 13:34:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:34:51] ANSI_COLOR="0;31"
[2026-01-09 13:34:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:34:51] HOME_URL="https://www.centos.org/"
[2026-01-09 13:34:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:34:51] 
[2026-01-09 13:34:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:34:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:34:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:34:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:34:51] 
[2026-01-09 13:34:51] 2026-01-09 12:33:55,257 | INFO     | ***************************************
[2026-01-09 13:34:51] 2026-01-09 12:33:55,760 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 13:34:51] 2026-01-09 12:33:55,771 | INFO     | sufficient remaining disk space (340883668992 B)
[2026-01-09 13:34:51] 2026-01-09 12:33:55,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | INFO     | update_server=False
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:34:51] 2026-01-09 12:33:55,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:34:51] 2026-01-09 12:33:55,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:34:51] 2026-01-09 12:33:56,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:34:51] 2026-01-09 12:33:56,116 | INFO     | aborting loop
[2026-01-09 13:34:51] 2026-01-09 12:33:56,738 | INFO     | all data control threads have been joined
[2026-01-09 13:34:51] 2026-01-09 12:33:56,777 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:56,777 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:56,783 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:56,796 | INFO     | all job control threads have been joined
[2026-01-09 13:34:51] 2026-01-09 12:33:57,121 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,145 | INFO     | all payload control threads have been joined
[2026-01-09 13:34:51] 2026-01-09 12:33:57,265 | INFO     | [job] validate thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,427 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,429 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,518 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,642 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,682 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,743 | INFO     | [data] control thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,778 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,801 | INFO     | [job] control thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:57,846 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:58,151 | INFO     | [payload] control thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:33:59,995 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:34:51] 2026-01-09 12:34:45,919 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:34:51] 2026-01-09 12:34:46,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947022796608)>', '<ExcThread(monitor, started 139946392278784)>']
[2026-01-09 13:34:51] 2026-01-09 12:34:47,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:34:51] 2026-01-09 12:34:47,025 | INFO     | [monitor] control thread has ended
[2026-01-09 13:34:51] 2026-01-09 12:34:51,259 | INFO     | all workflow threads have been joined
[2026-01-09 13:34:51] 2026-01-09 12:34:51,259 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:34:51] 2026-01-09 12:34:51,260 | INFO     | traces error code: 0
[2026-01-09 13:34:51] 2026-01-09 12:34:51,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:34:51] 2026-01-09 12:34:51,305 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:34:51] 2026-01-09 12:34:51,307 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:34:51] 2026-01-09 12:34:51,309 [wrapper] pilotpid: 3498304
[2026-01-09 13:34:51] 2026-01-09 12:34:51,312 [wrapper] Pilot exit status: 0
[2026-01-09 13:34:51] 2026-01-09 12:34:51,318 [wrapper] pandaids: 6963146859
[2026-01-09 13:34:51] 2026-01-09 12:34:51,336 [wrapper] cleanup supervisor_pilot 3544717 3498305
[2026-01-09 13:34:51] 2026-01-09 12:34:51,338 [wrapper] Test setup, not cleaning
[2026-01-09 13:34:51] 2026-01-09 12:34:51,340 [wrapper] apfmon messages muted
[2026-01-09 13:34:51] 2026-01-09 12:34:51,342 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:34:51] 2026-01-09 12:34:51,344 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:34:51]  *** Error codes and diagnostics ***
[2026-01-09 13:34:51]     "exeErrorCode": 0,
[2026-01-09 13:34:51]     "exeErrorDiag": "",
[2026-01-09 13:34:51]     "pilotErrorCode": 0,
[2026-01-09 13:34:51]     "pilotErrorDiag": "",
[2026-01-09 13:34:51]  *** Listing of results directory ***
[2026-01-09 13:34:51] total 441732
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 13:34:51] -rwx------ 1 boinc boinc     36322 Jan  8 16:06 runpilot2-wrapper.sh
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc       100 Jan  9 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:34:51] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 10:30 run_atlas
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc       105 Jan  9 10:30 job.xml
[2026-01-09 13:34:51] -rw-r--r-- 2 boinc boinc 227614291 Jan  9 10:30 EVNT.47898824._001071.pool.root.1
[2026-01-09 13:34:51] drwxrwx--x 2 boinc boinc      4096 Jan  9 10:30 shared
[2026-01-09 13:34:51] -rw-r--r-- 2 boinc boinc    592397 Jan  9 10:30 input.tar.gz
[2026-01-09 13:34:51] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:30 start_atlas.sh
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:30 boinc_setup_complete
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc      6205 Jan  9 10:30 init_data.xml
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc         0 Jan  9 10:30 boinc_lockfile
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc      2519 Jan  9 10:30 pandaJob.out
[2026-01-09 13:34:51] -rw------- 1 boinc boinc    989751 Jan  9 10:30 agis_schedconf.cvmfs.json
[2026-01-09 13:34:51] drwx------ 5 boinc boinc      4096 Jan  9 10:30 pilot3
[2026-01-09 13:34:51] -rw------- 1 boinc boinc 217045296 Jan  9 13:33 HITS.47898826._027162.pool.root.1
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc       530 Jan  9 13:33 boinc_task_state.xml
[2026-01-09 13:34:51] -rw------- 1 boinc boinc      1030 Jan  9 13:33 memory_monitor_summary.json
[2026-01-09 13:34:51] -rw------- 1 boinc boinc        95 Jan  9 13:33 pilot_heartbeat.json
[2026-01-09 13:34:51] -rw------- 1 boinc boinc   1516240 Jan  9 13:33 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:34:51] -rw------- 1 boinc boinc    328449 Jan  9 13:33 log.47898826._027162.job.log.tgz.1
[2026-01-09 13:34:51] -rw------- 1 boinc boinc      7757 Jan  9 13:33 heartbeat.json
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc      8192 Jan  9 13:34 boinc_mmap_file
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc        28 Jan  9 13:34 wrapper_checkpoint.txt
[2026-01-09 13:34:51] -rw------- 1 boinc boinc      4556 Jan  9 13:34 pilotlog.txt
[2026-01-09 13:34:51] -rw------- 1 boinc boinc   1557342 Jan  9 13:34 log.47898826._027162.job.log.1
[2026-01-09 13:34:51] -rw------- 1 boinc boinc       357 Jan  9 13:34 output.list
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc       620 Jan  9 13:34 runtime_log
[2026-01-09 13:34:51] -rw------- 1 boinc boinc   1904640 Jan  9 13:34 result.tar.gz
[2026-01-09 13:34:51] -rw------- 1 boinc boinc       661 Jan  9 13:34 ttVKDmZl6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwafKDmxfVnfm.diag
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc      8898 Jan  9 13:34 runtime_log.err
[2026-01-09 13:34:51] -rw-r--r-- 1 boinc boinc      9147 Jan  9 13:34 stderr.txt
[2026-01-09 13:34:51] HITS file was successfully produced:
[2026-01-09 13:34:51] -rw------- 1 boinc boinc 217045296 Jan  9 13:33 shared/HITS.pool.root.1
[2026-01-09 13:34:51]  *** Contents of shared directory: ***
[2026-01-09 13:34:51] total 436704
[2026-01-09 13:34:51] -rw-r--r-- 2 boinc boinc 227614291 Jan  9 10:30 ATLAS.root_0
[2026-01-09 13:34:51] -rw-r--r-- 2 boinc boinc    592397 Jan  9 10:30 input.tar.gz
[2026-01-09 13:34:51] -rw-r--r-- 2 boinc boinc     15847 Jan  9 10:30 start_atlas.sh
[2026-01-09 13:34:51] -rw------- 1 boinc boinc 217045296 Jan  9 13:33 HITS.pool.root.1
[2026-01-09 13:34:51] -rw------- 1 boinc boinc   1904640 Jan  9 13:34 result.tar.gz
13:34:52 (3494578): run_atlas exited; CPU time 21695.251930
13:34:52 (3494578): called boinc_finish(0)

</stderr_txt>
]]>

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