Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:27:30 (1924798): wrapper (7.7.26015): starting
03:27:30 (1924798): wrapper: running run_atlas (--nthreads 3)
[2026-01-11 03:27:30] Arguments: --nthreads 3
[2026-01-11 03:27:30] Threads: 3
[2026-01-11 03:27:30] Checking for CVMFS
[2026-01-11 03:27:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 03:27:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 03:27:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 03:27:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 03:27:30] 2.12.7.0 2907148 4968 53412 155000 1 57 3690222 6144000 2751 130560 1 7330133 99.995 184161 1336 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2026-01-11 03:27:30] CVMFS is ok
[2026-01-11 03:27:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 03:27:30] Checking for apptainer binary...
[2026-01-11 03:27:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 03:27:30] Running /usr/bin/apptainer --version
[2026-01-11 03:27:30] apptainer version 1.4.5
[2026-01-11 03:27:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 03:27:30] Ryzen3
[2026-01-11 03:27:30] apptainer works
[2026-01-11 03:27:31] Set ATHENA_PROC_NUMBER=3
[2026-01-11 03:27:31] Set ATHENA_CORE_NUMBER=3
[2026-01-11 03:27:31] Starting ATLAS job with PandaID=6963146559
[2026-01-11 03:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:12:06]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:12:06] 2026-01-11 06:11:14,798 | WARNING  | process 1935080 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 07:12:06] 2026-01-11 06:11:14,799 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6963146559/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:12:06] 2026-01-11 06:11:14,880 | INFO     | number of running child processes to parent process 1935080: 1
[2026-01-11 07:12:06] 2026-01-11 06:11:14,880 | INFO     | maximum number of monitored processes: 6
[2026-01-11 07:12:06] 2026-01-11 06:11:15,064 | INFO     | time since job start (13417s) is within the limit (349056.0s)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,067 | INFO     | time since job start (13419s) is within the limit (349056.0s)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,383 | INFO     | monitor loop #1005: job 0:6963146559 is in state 'finished'
[2026-01-11 07:12:06] 2026-01-11 06:11:17,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,563 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:12:06] 2026-01-11 06:11:17,564 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3961.8222499999997
[2026-01-11 07:12:06] 2026-01-11 06:11:17,566 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6963146559/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,567 | INFO     | extracted standard info from prmon json
[2026-01-11 07:12:06] 2026-01-11 06:11:17,567 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:12:06] 2026-01-11 06:11:17,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:12:06] 2026-01-11 06:11:17,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:12:06] 2026-01-11 06:11:17,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:12:06] 2026-01-11 06:11:17,569 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:12:06] 2026-01-11 06:11:17,570 | INFO     | sum of square deviations: 3301699115.0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,571 | INFO     | sum of deviations: -57209139353.49997
[2026-01-11 07:12:06] 2026-01-11 06:11:17,571 | INFO     | mean x: 1768105158.5
[2026-01-11 07:12:06] 2026-01-11 06:11:17,571 | INFO     | mean y: 2355638.55
[2026-01-11 07:12:06] 2026-01-11 06:11:17,571 | INFO     | intersect: 30638634379.00956
[2026-01-11 07:12:06] 2026-01-11 06:11:17,571 | INFO     | chi2: 1.5313549585233253
[2026-01-11 07:12:06] 2026-01-11 06:11:17,571 | INFO     | sum of square deviations: 3081657780.0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,572 | INFO     | sum of deviations: -55698157733.0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,572 | INFO     | mean x: 1768105006.0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,572 | INFO     | mean y: 2356685.930232558
[2026-01-11 07:12:06] 2026-01-11 06:11:17,572 | INFO     | intersect: 31959244355.882645
[2026-01-11 07:12:06] 2026-01-11 06:11:17,573 | INFO     | chi2: 1.5234875863934274
[2026-01-11 07:12:06] 2026-01-11 06:11:17,573 | INFO     | current chi2=1.5234875863934274 (change=0.513752352849943 %)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,573 | INFO     | right removable region: 214
[2026-01-11 07:12:06] 2026-01-11 06:11:17,573 | INFO     | sum of square deviations: 3081657780.0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,574 | INFO     | sum of deviations: -69396930172.99998
[2026-01-11 07:12:06] 2026-01-11 06:11:17,574 | INFO     | mean x: 1768105311.0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,574 | INFO     | mean y: 2363837.930232558
[2026-01-11 07:12:06] 2026-01-11 06:11:17,574 | INFO     | intersect: 39818946198.99221
[2026-01-11 07:12:06] 2026-01-11 06:11:17,574 | INFO     | chi2: 0.47499192470930784
[2026-01-11 07:12:06] 2026-01-11 06:11:17,574 | INFO     | current chi2=0.47499192470930784 (change=68.98224529423675 %)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,575 | INFO     | sum of square deviations: 2871616632.5
[2026-01-11 07:12:06] 2026-01-11 06:11:17,575 | INFO     | sum of deviations: -58801720734.99999
[2026-01-11 07:12:06] 2026-01-11 06:11:17,576 | INFO     | mean x: 1768105463.5
[2026-01-11 07:12:06] 2026-01-11 06:11:17,576 | INFO     | mean y: 2356143.0857142857
[2026-01-11 07:12:06] 2026-01-11 06:11:17,576 | INFO     | intersect: 36207622026.45036
[2026-01-11 07:12:06] 2026-01-11 06:11:17,576 | INFO     | chi2: 0.4485961665468168
[2026-01-11 07:12:06] 2026-01-11 06:11:17,576 | INFO     | current chi2=0.4485961665468168 (change=5.557096192455295 %)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,576 | INFO     | left removable region: 20
[2026-01-11 07:12:06] 2026-01-11 06:11:17,576 | INFO     | sum of square deviations: 2263977332.5
[2026-01-11 07:12:06] 2026-01-11 06:11:17,577 | INFO     | sum of deviations: -35691544080.00001
[2026-01-11 07:12:06] 2026-01-11 06:11:17,577 | INFO     | mean x: 1768105585.5
[2026-01-11 07:12:06] 2026-01-11 06:11:17,577 | INFO     | mean y: 2339778.6701030927
[2026-01-11 07:12:06] 2026-01-11 06:11:17,577 | INFO     | intersect: 27876478594.928535
[2026-01-11 07:12:06] 2026-01-11 06:11:17,577 | INFO     | chi2: 0.3531494937807383
[2026-01-11 07:12:06] 2026-01-11 06:11:17,577 | INFO     | current memory leak: -15.76 B/s (using 194 data points, chi2=0.35)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | could have reported an average CPU frequency of 3945 MHz (11 samples)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | ..............................
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . Timing measurements:
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . get job = 0 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . initial setup = 1 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . payload setup = 3 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . stage-in = 0 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . payload execution = 13391 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . stage-out = 0 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | . log creation = 0 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,578 | INFO     | ..............................
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | 
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | job summary report
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | --------------------------------------------------
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | PanDA job id: 6963146559
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | task id: 47898826
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | errors: (none)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | pilot state: finished 
[2026-01-11 07:12:06] 2026-01-11 06:11:17,640 | INFO     | transexitcode: 0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | exeerrorcode: 0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | exeerrordiag: 
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | exitcode: 0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | exitmsg: OK
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | cpuconsumptiontime: 39175 s
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | nevents: 400
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | neventsw: 0
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | pid: 1935080
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | pgrp: 1935080
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | corecount: 3
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | event service: False
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | sizes: {0: 2283969, 3: 2284231, 11: 2284259, 13398: 2314659, 13399: 2323712, 13402: 2323712, 13406: 2324034}
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | --------------------------------------------------
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | 
[2026-01-11 07:12:06] 2026-01-11 06:11:17,641 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | job 6963146559 has completed (purged errors)
[2026-01-11 07:12:06] 2026-01-11 06:11:17,658 | INFO     | overall cleanup function is called
[2026-01-11 07:12:06] 2026-01-11 06:11:18,665 | INFO     | --- collectZombieJob: --- 10, [1935080]
[2026-01-11 07:12:06] 2026-01-11 06:11:18,666 | INFO     | zombie collector waiting for pid 1935080
[2026-01-11 07:12:06] 2026-01-11 06:11:18,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:12:06] 2026-01-11 06:11:18,666 | INFO     | collected zombie processes
[2026-01-11 07:12:06] 2026-01-11 06:11:18,666 | INFO     | will attempt to kill all subprocesses of pid=1935080
[2026-01-11 07:12:06] 2026-01-11 06:11:18,743 | INFO     | process IDs to be killed: [1935080] (in reverse order)
[2026-01-11 07:12:06] 2026-01-11 06:11:18,778 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:12:06] 2026-01-11 06:11:18,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:12:06] 2026-01-11 06:11:18,781 | INFO     | did not find any defunct processes belonging to 1935080
[2026-01-11 07:12:06] 2026-01-11 06:11:18,783 | INFO     | did not find any defunct processes belonging to 1935080
[2026-01-11 07:12:06] 2026-01-11 06:11:18,783 | INFO     | ready for new job
[2026-01-11 07:12:06] 2026-01-11 06:11:18,784 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:12:06] 2026-01-11 06:11:18,785 | INFO     | ***************************************
[2026-01-11 07:12:06] 2026-01-11 06:11:18,785 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:12:06] 2026-01-11 06:11:18,785 | INFO     | ***************************************
[2026-01-11 07:12:06] 2026-01-11 06:11:18,785 | INFO     | 
[2026-01-11 07:12:06] 2026-01-11 06:11:18,786 | INFO     | architecture information:
[2026-01-11 07:12:06] 2026-01-11 06:11:18,786 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:12:06] 2026-01-11 06:11:18,797 | INFO     | cat /etc/os-release:
[2026-01-11 07:12:06] NAME="CentOS Linux"
[2026-01-11 07:12:06] VERSION="7 (Core)"
[2026-01-11 07:12:06] ID="centos"
[2026-01-11 07:12:06] ID_LIKE="rhel fedora"
[2026-01-11 07:12:06] VERSION_ID="7"
[2026-01-11 07:12:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:12:06] ANSI_COLOR="0;31"
[2026-01-11 07:12:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:12:06] HOME_URL="https://www.centos.org/"
[2026-01-11 07:12:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:12:06] 
[2026-01-11 07:12:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:12:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:12:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:12:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:12:06] 
[2026-01-11 07:12:06] 2026-01-11 06:11:18,797 | INFO     | ***************************************
[2026-01-11 07:12:06] 2026-01-11 06:11:19,300 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-11 07:12:06] 2026-01-11 06:11:19,313 | INFO     | sufficient remaining disk space (235104370688 B)
[2026-01-11 07:12:06] 2026-01-11 06:11:19,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:12:06] 2026-01-11 06:11:19,313 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:12:06] 2026-01-11 06:11:19,314 | INFO     | update_server=False
[2026-01-11 07:12:06] 2026-01-11 06:11:19,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:12:06] 2026-01-11 06:11:19,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:12:06] 2026-01-11 06:11:19,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:12:06] 2026-01-11 06:11:19,314 | INFO     | aborting loop
[2026-01-11 07:12:06] 2026-01-11 06:11:19,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:12:06] 2026-01-11 06:11:19,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:12:06] 2026-01-11 06:11:19,559 | INFO     | all payload control threads have been joined
[2026-01-11 07:12:06] 2026-01-11 06:11:20,110 | INFO     | all data control threads have been joined
[2026-01-11 07:12:06] 2026-01-11 06:11:20,317 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:20,317 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:20,319 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:20,565 | INFO     | [payload] control thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:20,620 | INFO     | all job control threads have been joined
[2026-01-11 07:12:06] 2026-01-11 06:11:20,792 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,116 | INFO     | [data] control thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,227 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,320 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,327 | INFO     | [job] validate thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,379 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,533 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,625 | INFO     | [job] control thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,645 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:21,837 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:23,325 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:29,950 | INFO     | job.realtimelogging is not enabled
[2026-01-11 07:12:06] 2026-01-11 06:11:30,953 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:12:06] 2026-01-11 06:11:50,221 | INFO     | PID=1928512 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 07:12:06] 2026-01-11 06:11:50,221 | INFO     | .. there are 4 such processes running
[2026-01-11 07:12:06] 2026-01-11 06:11:50,221 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:12:06] 2026-01-11 06:11:50,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:12:06] 2026-01-11 06:11:50,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:12:06] 2026-01-11 06:11:59,797 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:12:06] 2026-01-11 06:12:01,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333521758016)>', '<ExcThread(monitor, started 140332746401536)>']
[2026-01-11 07:12:06] 2026-01-11 06:12:02,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:12:06] 2026-01-11 06:12:02,261 | INFO     | [monitor] control thread has ended
[2026-01-11 07:12:06] 2026-01-11 06:12:06,774 | INFO     | all workflow threads have been joined
[2026-01-11 07:12:06] 2026-01-11 06:12:06,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:12:06] 2026-01-11 06:12:06,774 | INFO     | traces error code: 0
[2026-01-11 07:12:06] 2026-01-11 06:12:06,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:12:06] 2026-01-11 06:12:06,857 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:12:06] 2026-01-11 06:12:06,860 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:12:06] 2026-01-11 06:12:06,862 [wrapper] pilotpid: 1928512
[2026-01-11 07:12:06] 2026-01-11 06:12:06,864 [wrapper] Pilot exit status: 0
[2026-01-11 07:12:06] 2026-01-11 06:12:06,872 [wrapper] pandaids: 6963146559
[2026-01-11 07:12:06] 2026-01-11 06:12:06,897 [wrapper] cleanup supervisor_pilot 2080209 1928513
[2026-01-11 07:12:06] 2026-01-11 06:12:06,900 [wrapper] Test setup, not cleaning
[2026-01-11 07:12:06] 2026-01-11 06:12:06,902 [wrapper] apfmon messages muted
[2026-01-11 07:12:06] 2026-01-11 06:12:06,904 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:12:06] 2026-01-11 06:12:06,906 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:12:06]  *** Error codes and diagnostics ***
[2026-01-11 07:12:06]     "exeErrorCode": 0,
[2026-01-11 07:12:06]     "exeErrorDiag": "",
[2026-01-11 07:12:06]     "pilotErrorCode": 0,
[2026-01-11 07:12:06]     "pilotErrorDiag": "",
[2026-01-11 07:12:06]  *** Listing of results directory ***
[2026-01-11 07:12:06] insgesamt 445644
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc    579449  8. Jan 16:02 pilot3.tar.gz
[2026-01-11 07:12:06] -rwx------ 1 boinc boinc     36322  8. Jan 16:05 runpilot2-wrapper.sh
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc      5112  8. Jan 16:07 queuedata.json
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc       100 11. Jan 03:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:12:06] -rwxr-xr-x 1 boinc boinc      7986 11. Jan 03:27 run_atlas
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc       105 11. Jan 03:27 job.xml
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc      6914 11. Jan 03:27 init_data.xml
[2026-01-11 07:12:06] -rw-r--r-- 2 boinc boinc 227316097 11. Jan 03:27 EVNT.47898824._001060.pool.root.1
[2026-01-11 07:12:06] drwxrwx--x 2 boinc boinc      4096 11. Jan 03:27 shared
[2026-01-11 07:12:06] -rw-r--r-- 2 boinc boinc    592396 11. Jan 03:27 input.tar.gz
[2026-01-11 07:12:06] -rw-r--r-- 2 boinc boinc     15847 11. Jan 03:27 start_atlas.sh
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc         0 11. Jan 03:27 boinc_lockfile
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc      2519 11. Jan 03:27 pandaJob.out
[2026-01-11 07:12:06] -rw------- 1 boinc boinc        52 11. Jan 03:27 setup.sh.local
[2026-01-11 07:12:06] -rw------- 1 boinc boinc    989548 11. Jan 03:27 agis_schedconf.cvmfs.json
[2026-01-11 07:12:06] drwx------ 5 boinc boinc      4096 11. Jan 03:27 pilot3
[2026-01-11 07:12:06] -rw------- 1 boinc boinc 220509771 11. Jan 07:10 HITS.47898826._026886.pool.root.1
[2026-01-11 07:12:06] -rw------- 1 boinc boinc      1023 11. Jan 07:11 memory_monitor_summary.json
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc       530 11. Jan 07:11 boinc_task_state.xml
[2026-01-11 07:12:06] -rw------- 1 boinc boinc   1516240 11. Jan 07:11 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:12:06] -rw------- 1 boinc boinc    375290 11. Jan 07:11 log.47898826._026886.job.log.tgz.1
[2026-01-11 07:12:06] -rw------- 1 boinc boinc      7741 11. Jan 07:11 heartbeat.json
[2026-01-11 07:12:06] -rw------- 1 boinc boinc        95 11. Jan 07:11 pilot_heartbeat.json
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc        28 11. Jan 07:12 wrapper_checkpoint.txt
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc      8192 11. Jan 07:12 boinc_mmap_file
[2026-01-11 07:12:06] -rw------- 1 boinc boinc      4896 11. Jan 07:12 pilotlog.txt
[2026-01-11 07:12:06] -rw------- 1 boinc boinc   1923195 11. Jan 07:12 log.47898826._026886.job.log.1
[2026-01-11 07:12:06] -rw------- 1 boinc boinc       357 11. Jan 07:12 output.list
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc       620 11. Jan 07:12 runtime_log
[2026-01-11 07:12:06] -rw------- 1 boinc boinc   2314240 11. Jan 07:12 result.tar.gz
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc      9270 11. Jan 07:12 runtime_log.err
[2026-01-11 07:12:06] -rw------- 1 boinc boinc       649 11. Jan 07:12 DMMKDmOl6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPmkKDmjJdZSo.diag
[2026-01-11 07:12:06] -rw-r--r-- 1 boinc boinc     20980 11. Jan 07:12 stderr.txt
[2026-01-11 07:12:06] HITS file was successfully produced:
[2026-01-11 07:12:06] -rw------- 1 boinc boinc 220509771 11. Jan 07:10 shared/HITS.pool.root.1
[2026-01-11 07:12:06]  *** Contents of shared directory: ***
[2026-01-11 07:12:06] insgesamt 440200
[2026-01-11 07:12:06] -rw-r--r-- 2 boinc boinc 227316097 11. Jan 03:27 ATLAS.root_0
[2026-01-11 07:12:06] -rw-r--r-- 2 boinc boinc    592396 11. Jan 03:27 input.tar.gz
[2026-01-11 07:12:06] -rw-r--r-- 2 boinc boinc     15847 11. Jan 03:27 start_atlas.sh
[2026-01-11 07:12:06] -rw------- 1 boinc boinc 220509771 11. Jan 07:10 HITS.pool.root.1
[2026-01-11 07:12:06] -rw------- 1 boinc boinc   2314240 11. Jan 07:12 result.tar.gz
07:12:08 (1924798): run_atlas exited; CPU time 39289.587794
07:12:08 (1924798): called boinc_finish(0)

</stderr_txt>
]]>

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