Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:52:04 (3505755): wrapper (7.7.26015): starting
11:52:04 (3505755): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 11:52:04] Arguments: --nthreads 4
[2026-01-12 11:52:04] Threads: 4
[2026-01-12 11:52:04] Checking for CVMFS
[2026-01-12 11:52:04] No cvmfs_config command found, will try listing directly
[2026-01-12 11:52:04] CVMFS is ok
[2026-01-12 11:52:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 11:52:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 11:52:04] Further information can be found at the LHC@home message board.
[2026-01-12 11:52:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 11:52:04] Checking for apptainer binary...
[2026-01-12 11:52:04] which: no apptainer in ((null))
[2026-01-12 11:52:04] apptainer is not installed, using version from CVMFS
[2026-01-12 11:52:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 11:52:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2026-01-12 11:52:04] apptainer works
[2026-01-12 11:52:04] Set ATHENA_PROC_NUMBER=4
[2026-01-12 11:52:04] Set ATHENA_CORE_NUMBER=4
[2026-01-12 11:52:04] Starting ATLAS job with PandaID=6963146439
[2026-01-12 11:52:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 16:16:47]  *** The last 200 lines of the pilot log: ***
[2026-01-12 16:16:47] 2026-01-12 15:15:49,160 | INFO     | total number of processed events: 400 (read)
[2026-01-12 16:16:47] 2026-01-12 15:15:49,161 | INFO     | executing command: lscpu
[2026-01-12 16:16:47] 2026-01-12 15:15:49,201 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 16:16:47] 2026-01-12 15:15:50,694 | INFO     | time since job start (15815s) is within the limit (349056.0s)
[2026-01-12 16:16:47] 2026-01-12 15:15:51,406 | INFO     | monitor loop #1159: job 0:6963146439 is in state 'finished'
[2026-01-12 16:16:47] 2026-01-12 15:15:51,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 16:16:47] 2026-01-12 15:15:52,700 | INFO     | time since job start (15817s) is within the limit (349056.0s)
[2026-01-12 16:16:47] 2026-01-12 15:15:53,909 | INFO     | monitor loop #1160: job 0:6963146439 is in state 'finished'
[2026-01-12 16:16:47] 2026-01-12 15:15:53,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,596 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 16:16:47] 2026-01-12 15:15:54,604 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2634.6002
[2026-01-12 16:16:47] 2026-01-12 15:15:54,612 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6963146439/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,613 | INFO     | extracted standard info from prmon json
[2026-01-12 16:16:47] 2026-01-12 15:15:54,613 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 16:16:47] 2026-01-12 15:15:54,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 16:16:47] 2026-01-12 15:15:54,614 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 16:16:47] 2026-01-12 15:15:54,614 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 16:16:47] 2026-01-12 15:15:54,620 | INFO     | fitting pss+swap vs Time
[2026-01-12 16:16:47] 2026-01-12 15:15:54,620 | INFO     | sum of square deviations: 5387301010.0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,622 | INFO     | sum of deviations: -15821679129.000006
[2026-01-12 16:16:47] 2026-01-12 15:15:54,623 | INFO     | mean x: 1768223029.0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,623 | INFO     | mean y: 2400156.5366795366
[2026-01-12 16:16:47] 2026-01-12 15:15:54,623 | INFO     | intersect: 5195400759.513285
[2026-01-12 16:16:47] 2026-01-12 15:15:54,623 | INFO     | chi2: 1.538288871410297
[2026-01-12 16:16:47] 2026-01-12 15:15:54,624 | INFO     | sum of square deviations: 5081276667.5
[2026-01-12 16:16:47] 2026-01-12 15:15:54,626 | INFO     | sum of deviations: -15411002423.999994
[2026-01-12 16:16:47] 2026-01-12 15:15:54,626 | INFO     | mean x: 1768222876.5
[2026-01-12 16:16:47] 2026-01-12 15:15:54,626 | INFO     | mean y: 2400361.2125984253
[2026-01-12 16:16:47] 2026-01-12 15:15:54,627 | INFO     | intersect: 5365242973.22901
[2026-01-12 16:16:47] 2026-01-12 15:15:54,627 | INFO     | chi2: 1.5375435021045285
[2026-01-12 16:16:47] 2026-01-12 15:15:54,627 | INFO     | current chi2=1.5375435021045285 (change=0.048454443090721624 %)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,627 | INFO     | right removable region: 253
[2026-01-12 16:16:47] 2026-01-12 15:15:54,628 | INFO     | sum of square deviations: 5081276667.5
[2026-01-12 16:16:47] 2026-01-12 15:15:54,630 | INFO     | sum of deviations: -43176362572.50001
[2026-01-12 16:16:47] 2026-01-12 15:15:54,630 | INFO     | mean x: 1768223181.5
[2026-01-12 16:16:47] 2026-01-12 15:15:54,630 | INFO     | mean y: 2413602.8622047245
[2026-01-12 16:16:47] 2026-01-12 15:15:54,630 | INFO     | intersect: 15027268612.598495
[2026-01-12 16:16:47] 2026-01-12 15:15:54,631 | INFO     | chi2: 0.3093638267267226
[2026-01-12 16:16:47] 2026-01-12 15:15:54,631 | INFO     | current chi2=0.3093638267267226 (change=79.88909414373524 %)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,632 | INFO     | sum of square deviations: 4787066500.0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,634 | INFO     | sum of deviations: -31408694429.999996
[2026-01-12 16:16:47] 2026-01-12 15:15:54,634 | INFO     | mean x: 1768223334.0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,634 | INFO     | mean y: 2407491.75502008
[2026-01-12 16:16:47] 2026-01-12 15:15:54,634 | INFO     | intersect: 11603998232.473124
[2026-01-12 16:16:47] 2026-01-12 15:15:54,634 | INFO     | chi2: 0.2585333916038165
[2026-01-12 16:16:47] 2026-01-12 15:15:54,635 | INFO     | current chi2=0.2585333916038165 (change=16.430633038363368 %)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,635 | INFO     | left removable region: 20
[2026-01-12 16:16:47] 2026-01-12 15:15:54,635 | INFO     | sum of square deviations: 3922276332.0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,637 | INFO     | sum of deviations: -3309696520.0000005
[2026-01-12 16:16:47] 2026-01-12 15:15:54,637 | INFO     | mean x: 1768223456.0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,637 | INFO     | mean y: 2392122.2017167383
[2026-01-12 16:16:47] 2026-01-12 15:15:54,638 | INFO     | intersect: 1494455027.3977532
[2026-01-12 16:16:47] 2026-01-12 15:15:54,638 | INFO     | chi2: 0.058825659526834224
[2026-01-12 16:16:47] 2026-01-12 15:15:54,638 | INFO     | current memory leak: -0.84 B/s (using 233 data points, chi2=0.06)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,639 | INFO     | could have reported an average CPU frequency of 2617 MHz (12 samples)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,639 | INFO     | ..............................
[2026-01-12 16:16:47] 2026-01-12 15:15:54,639 | INFO     | . Timing measurements:
[2026-01-12 16:16:47] 2026-01-12 15:15:54,639 | INFO     | . get job = 0 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,639 | INFO     | . initial setup = 1 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,640 | INFO     | . payload setup = 5 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,640 | INFO     | . stage-in = 0 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,640 | INFO     | . payload execution = 15781 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,640 | INFO     | . stage-out = 1 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,640 | INFO     | . log creation = 0 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,640 | INFO     | ..............................
[2026-01-12 16:16:47] 2026-01-12 15:15:54,705 | INFO     | time since job start (15819s) is within the limit (349056.0s)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,749 | INFO     | 
[2026-01-12 16:16:47] 2026-01-12 15:15:54,750 | INFO     | job summary report
[2026-01-12 16:16:47] 2026-01-12 15:15:54,750 | INFO     | --------------------------------------------------
[2026-01-12 16:16:47] 2026-01-12 15:15:54,750 | INFO     | PanDA job id: 6963146439
[2026-01-12 16:16:47] 2026-01-12 15:15:54,750 | INFO     | task id: 47898826
[2026-01-12 16:16:47] 2026-01-12 15:15:54,750 | INFO     | errors: (none)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,750 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 16:16:47] 2026-01-12 15:15:54,750 | INFO     | pilot state: finished 
[2026-01-12 16:16:47] 2026-01-12 15:15:54,751 | INFO     | transexitcode: 0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,751 | INFO     | exeerrorcode: 0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,751 | INFO     | exeerrordiag: 
[2026-01-12 16:16:47] 2026-01-12 15:15:54,751 | INFO     | exitcode: 0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,751 | INFO     | exitmsg: OK
[2026-01-12 16:16:47] 2026-01-12 15:15:54,751 | INFO     | cpuconsumptiontime: 61336 s
[2026-01-12 16:16:47] 2026-01-12 15:15:54,751 | INFO     | nevents: 400
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | neventsw: 0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | pid: 3516439
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | pgrp: 3516439
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | corecount: 4
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | event service: False
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | sizes: {0: 2283809, 1: 2284008, 5: 2284270, 12: 2284326, 15791: 2315652, 15794: 2324672, 15797: 2324884, 15805: 2325078}
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | --------------------------------------------------
[2026-01-12 16:16:47] 2026-01-12 15:15:54,752 | INFO     | 
[2026-01-12 16:16:47] 2026-01-12 15:15:54,753 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-01-12 16:16:47] 2026-01-12 15:15:54,771 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,771 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,771 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,772 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,774 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,774 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 16:16:47] 2026-01-12 15:15:54,774 | INFO     | job 6963146439 has completed (purged errors)
[2026-01-12 16:16:47] 2026-01-12 15:15:54,774 | INFO     | overall cleanup function is called
[2026-01-12 16:16:47] 2026-01-12 15:15:55,783 | INFO     | --- collectZombieJob: --- 10, [3516439]
[2026-01-12 16:16:47] 2026-01-12 15:15:55,783 | INFO     | zombie collector waiting for pid 3516439
[2026-01-12 16:16:47] 2026-01-12 15:15:55,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 16:16:47] 2026-01-12 15:15:55,783 | INFO     | collected zombie processes
[2026-01-12 16:16:47] 2026-01-12 15:15:55,783 | INFO     | will attempt to kill all subprocesses of pid=3516439
[2026-01-12 16:16:47] 2026-01-12 15:15:56,060 | INFO     | process IDs to be killed: [3516439] (in reverse order)
[2026-01-12 16:16:47] 2026-01-12 15:15:56,138 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 16:16:47] 2026-01-12 15:15:56,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 16:16:47] 2026-01-12 15:15:56,146 | INFO     | did not find any defunct processes belonging to 3516439
[2026-01-12 16:16:47] 2026-01-12 15:15:56,154 | INFO     | did not find any defunct processes belonging to 3516439
[2026-01-12 16:16:47] 2026-01-12 15:15:56,154 | INFO     | ready for new job
[2026-01-12 16:16:47] 2026-01-12 15:15:56,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 16:16:47] 2026-01-12 15:15:56,157 | INFO     | ***************************************
[2026-01-12 16:16:47] 2026-01-12 15:15:56,157 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 16:16:47] 2026-01-12 15:15:56,157 | INFO     | ***************************************
[2026-01-12 16:16:47] 2026-01-12 15:15:56,157 | INFO     | 
[2026-01-12 16:16:47] 2026-01-12 15:15:56,160 | INFO     | architecture information:
[2026-01-12 16:16:47] 2026-01-12 15:15:56,160 | INFO     | executing command: cat /etc/os-release
[2026-01-12 16:16:47] 2026-01-12 15:15:56,173 | INFO     | cat /etc/os-release:
[2026-01-12 16:16:47] NAME="CentOS Linux"
[2026-01-12 16:16:47] VERSION="7 (Core)"
[2026-01-12 16:16:47] ID="centos"
[2026-01-12 16:16:47] ID_LIKE="rhel fedora"
[2026-01-12 16:16:47] VERSION_ID="7"
[2026-01-12 16:16:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 16:16:47] ANSI_COLOR="0;31"
[2026-01-12 16:16:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 16:16:47] HOME_URL="https://www.centos.org/"
[2026-01-12 16:16:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 16:16:47] 
[2026-01-12 16:16:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 16:16:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 16:16:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 16:16:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 16:16:47] 
[2026-01-12 16:16:47] 2026-01-12 15:15:56,174 | INFO     | ***************************************
[2026-01-12 16:16:47] 2026-01-12 15:15:56,677 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-01-12 16:16:47] 2026-01-12 15:15:56,691 | INFO     | sufficient remaining disk space (1679735914496 B)
[2026-01-12 16:16:47] 2026-01-12 15:15:56,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 16:16:47] 2026-01-12 15:15:56,692 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 16:16:47] 2026-01-12 15:15:56,692 | INFO     | update_server=False
[2026-01-12 16:16:47] 2026-01-12 15:15:56,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 16:16:47] 2026-01-12 15:15:56,693 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-12 16:16:47] 2026-01-12 15:15:56,693 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 16:16:47] 2026-01-12 15:15:56,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 16:16:47] 2026-01-12 15:15:56,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:16:47] 2026-01-12 15:15:56,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 16:16:47] 2026-01-12 15:15:56,753 | INFO     | all data control threads have been joined
[2026-01-12 16:16:47] 2026-01-12 15:15:56,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 16:16:47] 2026-01-12 15:15:57,115 | INFO     | all payload control threads have been joined
[2026-01-12 16:16:47] 2026-01-12 15:15:57,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:16:47] 2026-01-12 15:15:57,418 | INFO     | aborting loop
[2026-01-12 16:16:47] 2026-01-12 15:15:57,422 | INFO     | all job control threads have been joined
[2026-01-12 16:16:47] 2026-01-12 15:15:57,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 16:16:47] 2026-01-12 15:15:57,698 | INFO     | [job] retrieve thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:57,699 | INFO     | [job] queue monitor thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:57,759 | INFO     | [data] control thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:57,825 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,105 | INFO     | [payload] validate_post thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,121 | INFO     | [payload] control thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,424 | INFO     | [job] job monitor thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,426 | INFO     | [job] control thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,501 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,510 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,679 | INFO     | [job] validate thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,779 | INFO     | [data] copytool_in thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:58,814 | INFO     | [data] copytool_out thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:59,071 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:15:59,078 | INFO     | [payload] failed_post thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:16:01,648 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 16:16:47] 2026-01-12 15:16:39,114 | INFO     | [monitor] cgroup control has ended
[2026-01-12 16:16:47] 2026-01-12 15:16:40,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23382765848384)>', '<ExcThread(monitor, started 23382454134528)>']
[2026-01-12 16:16:47] 2026-01-12 15:16:40,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 16:16:47] 2026-01-12 15:16:40,898 | INFO     | [monitor] control thread has ended
[2026-01-12 16:16:47] 2026-01-12 15:16:45,163 | INFO     | all workflow threads have been joined
[2026-01-12 16:16:47] 2026-01-12 15:16:45,163 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 16:16:47] 2026-01-12 15:16:45,164 | INFO     | traces error code: 0
[2026-01-12 16:16:47] 2026-01-12 15:16:45,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 16:16:47] 2026-01-12 15:16:45,299 [wrapper] ==== pilot stdout END ====
[2026-01-12 16:16:47] 2026-01-12 15:16:45,302 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 16:16:47] 2026-01-12 15:16:45,304 [wrapper] pilotpid: 3509602
[2026-01-12 16:16:47] 2026-01-12 15:16:45,307 [wrapper] Pilot exit status: 0
[2026-01-12 16:16:47] 2026-01-12 15:16:45,316 [wrapper] pandaids: 6963146439
[2026-01-12 16:16:47] 2026-01-12 15:16:45,367 [wrapper] cleanup supervisor_pilot 3650818 3509603
[2026-01-12 16:16:47] 2026-01-12 15:16:45,370 [wrapper] Test setup, not cleaning
[2026-01-12 16:16:47] 2026-01-12 15:16:45,372 [wrapper] apfmon messages muted
[2026-01-12 16:16:47] 2026-01-12 15:16:45,374 [wrapper] ==== wrapper stdout END ====
[2026-01-12 16:16:47] 2026-01-12 15:16:45,377 [wrapper] ==== wrapper stderr END ====
[2026-01-12 16:16:47]  *** Error codes and diagnostics ***
[2026-01-12 16:16:47]     "exeErrorCode": 0,
[2026-01-12 16:16:47]     "exeErrorDiag": "",
[2026-01-12 16:16:47]     "pilotErrorCode": 0,
[2026-01-12 16:16:47]     "pilotErrorDiag": "",
[2026-01-12 16:16:47]  *** Listing of results directory ***
[2026-01-12 16:16:47] total 442876
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-12 16:16:47] -rwx------ 1 boinc boinc     36322 Jan  8 16:05 runpilot2-wrapper.sh
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc       100 Jan 12 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 16:16:47] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 11:51 run_atlas
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc       105 Jan 12 11:51 job.xml
[2026-01-12 16:16:47] -rw-r--r-- 2 boinc boinc 223697890 Jan 12 11:52 EVNT.47898824._001057.pool.root.1
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc      6424 Jan 12 11:52 init_data.xml
[2026-01-12 16:16:47] drwxrwx--x 2 boinc boinc      4096 Jan 12 11:52 shared
[2026-01-12 16:16:47] -rw-r--r-- 2 boinc boinc    592400 Jan 12 11:52 input.tar.gz
[2026-01-12 16:16:47] -rw-r--r-- 2 boinc boinc     15847 Jan 12 11:52 start_atlas.sh
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc         0 Jan 12 11:52 boinc_lockfile
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc      2519 Jan 12 11:52 pandaJob.out
[2026-01-12 16:16:47] -rw------- 1 boinc boinc    987696 Jan 12 11:52 agis_schedconf.cvmfs.json
[2026-01-12 16:16:47] drwx------ 5 boinc boinc      4096 Jan 12 11:52 pilot3
[2026-01-12 16:16:47] -rw------- 1 boinc boinc 220530155 Jan 12 16:14 HITS.47898826._026819.pool.root.1
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc       529 Jan 12 16:15 boinc_task_state.xml
[2026-01-12 16:16:47] -rw------- 1 boinc boinc        95 Jan 12 16:15 pilot_heartbeat.json
[2026-01-12 16:16:47] -rw------- 1 boinc boinc      1029 Jan 12 16:15 memory_monitor_summary.json
[2026-01-12 16:16:47] -rw------- 1 boinc boinc   1516240 Jan 12 16:15 agis_ddmendpoints.agis.ALL.json
[2026-01-12 16:16:47] -rw------- 1 boinc boinc    441392 Jan 12 16:15 log.47898826._026819.job.log.tgz.1
[2026-01-12 16:16:47] -rw------- 1 boinc boinc      7826 Jan 12 16:15 heartbeat.json
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc        26 Jan 12 16:16 wrapper_checkpoint.txt
[2026-01-12 16:16:47] -rw------- 1 boinc boinc      4563 Jan 12 16:16 pilotlog.txt
[2026-01-12 16:16:47] -rw------- 1 boinc boinc   2238079 Jan 12 16:16 log.47898826._026819.job.log.1
[2026-01-12 16:16:47] -rw------- 1 boinc boinc       357 Jan 12 16:16 output.list
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc       620 Jan 12 16:16 runtime_log
[2026-01-12 16:16:47] -rw------- 1 boinc boinc   2703360 Jan 12 16:16 result.tar.gz
[2026-01-12 16:16:47] -rw------- 1 boinc boinc       665 Jan 12 16:16 ukCODmNl6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8lkKDms2V3pn.diag
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc      9206 Jan 12 16:16 runtime_log.err
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc      8192 Jan 12 16:16 boinc_mmap_file
[2026-01-12 16:16:47] -rw-r--r-- 1 boinc boinc     21119 Jan 12 16:16 stderr.txt
[2026-01-12 16:16:47] HITS file was successfully produced:
[2026-01-12 16:16:47] -rw------- 1 boinc boinc 220530155 Jan 12 16:14 shared/HITS.pool.root.1
[2026-01-12 16:16:47]  *** Contents of shared directory: ***
[2026-01-12 16:16:47] total 437064
[2026-01-12 16:16:47] -rw-r--r-- 2 boinc boinc 223697890 Jan 12 11:52 ATLAS.root_0
[2026-01-12 16:16:47] -rw-r--r-- 2 boinc boinc    592400 Jan 12 11:52 input.tar.gz
[2026-01-12 16:16:47] -rw-r--r-- 2 boinc boinc     15847 Jan 12 11:52 start_atlas.sh
[2026-01-12 16:16:47] -rw------- 1 boinc boinc 220530155 Jan 12 16:14 HITS.pool.root.1
[2026-01-12 16:16:47] -rw------- 1 boinc boinc   2703360 Jan 12 16:16 result.tar.gz
16:16:49 (3505755): run_atlas exited; CPU time 61949.329126
16:16:49 (3505755): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN