Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:00:07 (1541947): wrapper (7.7.26015): starting
15:00:07 (1541947): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 15:00:07] Arguments: --nthreads 8
[2026-01-08 15:00:07] Threads: 8
[2026-01-08 15:00:07] Checking for CVMFS
[2026-01-08 15:00:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:00:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:00:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:00:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:00:08] 2.13.3.0 12537 92420 392004 154918 4 266 28627511 40960001 8642 16776704 43 375060107 99.603 393358914 37508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 15:00:08] CVMFS is ok
[2026-01-08 15:00:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 15:00:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 15:00:08] Further information can be found at the LHC@home message board.
[2026-01-08 15:00:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:00:08] Checking for apptainer binary...
[2026-01-08 15:00:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 15:00:08] Running /usr/bin/apptainer --version
[2026-01-08 15:00:09] apptainer version 1.4.5-2.el9
[2026-01-08 15:00:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:00:09] c7-11-14.aglt2.org
[2026-01-08 15:00:09] apptainer works
[2026-01-08 15:00:09] Set ATHENA_PROC_NUMBER=8
[2026-01-08 15:00:09] Set ATHENA_CORE_NUMBER=8
[2026-01-08 15:00:10] Starting ATLAS job with PandaID=6963078120
[2026-01-08 15:00:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:18:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:18:29] 2026-01-09 02:17:49,708 | INFO     | monitor loop #1443: job 0:6963078120 is in state 'finished'
[2026-01-08 21:18:29] 2026-01-09 02:17:49,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:18:29] 2026-01-09 02:17:50,361 | INFO     | time since job start (22576s) is within the limit (174528.0s)
[2026-01-08 21:18:29] 2026-01-09 02:17:52,217 | INFO     | monitor loop #1444: job 0:6963078120 is in state 'finished'
[2026-01-08 21:18:29] 2026-01-09 02:17:52,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:18:29] 2026-01-09 02:17:52,367 | INFO     | time since job start (22578s) is within the limit (174528.0s)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,193 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 21:18:29] 2026-01-09 02:17:53,197 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.3871718750006
[2026-01-08 21:18:29] 2026-01-09 02:17:53,215 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963078120/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,216 | INFO     | extracted standard info from prmon json
[2026-01-08 21:18:29] 2026-01-09 02:17:53,216 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:18:29] 2026-01-09 02:17:53,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:18:29] 2026-01-09 02:17:53,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:18:29] 2026-01-09 02:17:53,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:18:29] 2026-01-09 02:17:53,282 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:18:29] 2026-01-09 02:17:53,283 | INFO     | sum of square deviations: 15328296579.073536
[2026-01-08 21:18:29] 2026-01-09 02:17:53,286 | INFO     | sum of deviations: 109335741469.12537
[2026-01-08 21:18:29] 2026-01-09 02:17:53,286 | INFO     | mean x: 1767913825.3651226
[2026-01-08 21:18:29] 2026-01-09 02:17:53,286 | INFO     | mean y: 2489238.1035422343
[2026-01-08 21:18:29] 2026-01-09 02:17:53,286 | INFO     | intersect: -12607924968.893526
[2026-01-08 21:18:29] 2026-01-09 02:17:53,287 | INFO     | chi2: 3.681025796258674
[2026-01-08 21:18:29] 2026-01-09 02:17:53,287 | INFO     | sum of square deviations: 14710296153.09384
[2026-01-08 21:18:29] 2026-01-09 02:17:53,294 | INFO     | sum of deviations: 131118420349.87291
[2026-01-08 21:18:29] 2026-01-09 02:17:53,295 | INFO     | mean x: 1767913672.8618784
[2026-01-08 21:18:29] 2026-01-09 02:17:53,295 | INFO     | mean y: 2494550.1574585633
[2026-01-08 21:18:29] 2026-01-09 02:17:53,295 | INFO     | intersect: -15755587115.101095
[2026-01-08 21:18:29] 2026-01-09 02:17:53,295 | INFO     | chi2: 2.9906114621232622
[2026-01-08 21:18:29] 2026-01-09 02:17:53,295 | INFO     | current chi2=2.9906114621232622 (change=18.756030855234325 %)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,295 | INFO     | right removable region: 361
[2026-01-08 21:18:29] 2026-01-09 02:17:53,296 | INFO     | sum of square deviations: 14710303473.6353
[2026-01-08 21:18:29] 2026-01-09 02:17:53,302 | INFO     | sum of deviations: 12228239191.795574
[2026-01-08 21:18:29] 2026-01-09 02:17:53,302 | INFO     | mean x: 1767913977.8674033
[2026-01-08 21:18:29] 2026-01-09 02:17:53,302 | INFO     | mean y: 2513132.516574586
[2026-01-08 21:18:29] 2026-01-09 02:17:53,302 | INFO     | intersect: -1467101347.6080086
[2026-01-08 21:18:29] 2026-01-09 02:17:53,303 | INFO     | chi2: 0.8284807275490644
[2026-01-08 21:18:29] 2026-01-09 02:17:53,303 | INFO     | current chi2=0.8284807275490644 (change=77.49321049607649 %)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,303 | INFO     | sum of square deviations: 14109148015.193205
[2026-01-08 21:18:29] 2026-01-09 02:17:53,306 | INFO     | sum of deviations: -5605366443.722694
[2026-01-08 21:18:29] 2026-01-09 02:17:53,306 | INFO     | mean x: 1767914130.3697479
[2026-01-08 21:18:29] 2026-01-09 02:17:53,310 | INFO     | mean y: 2517642.4145658263
[2026-01-08 21:18:29] 2026-01-09 02:17:53,310 | INFO     | intersect: 704885108.6206443
[2026-01-08 21:18:29] 2026-01-09 02:17:53,310 | INFO     | chi2: 0.7359399108244407
[2026-01-08 21:18:29] 2026-01-09 02:17:53,310 | INFO     | current chi2=0.7359399108244407 (change=11.169941997129113 %)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,310 | INFO     | left removable region: 20
[2026-01-08 21:18:29] 2026-01-09 02:17:53,311 | INFO     | sum of square deviations: 12295853716.19942
[2026-01-08 21:18:29] 2026-01-09 02:17:53,317 | INFO     | sum of deviations: 9739055737.695011
[2026-01-08 21:18:29] 2026-01-09 02:17:53,317 | INFO     | mean x: 1767914252.3782992
[2026-01-08 21:18:29] 2026-01-09 02:17:53,317 | INFO     | mean y: 2525480.715542522
[2026-01-08 21:18:29] 2026-01-09 02:17:53,317 | INFO     | intersect: -1397768947.0470212
[2026-01-08 21:18:29] 2026-01-09 02:17:53,317 | INFO     | chi2: 0.015588158203605507
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | current memory leak: 0.79 B/s (using 341 data points, chi2=0.02)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | could have reported an average CPU frequency of 3290 MHz (16 samples)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | ..............................
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | . Timing measurements:
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | . get job = 0 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | . initial setup = 10 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | . payload setup = 56 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,318 | INFO     | . stage-in = 0 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,319 | INFO     | . payload execution = 22414 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,319 | INFO     | . stage-out = 3 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,319 | INFO     | . log creation = 0 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,329 | INFO     | ..............................
[2026-01-08 21:18:29] 2026-01-09 02:17:53,569 | INFO     | 
[2026-01-08 21:18:29] 2026-01-09 02:17:53,569 | INFO     | job summary report
[2026-01-08 21:18:29] 2026-01-09 02:17:53,569 | INFO     | --------------------------------------------------
[2026-01-08 21:18:29] 2026-01-09 02:17:53,569 | INFO     | PanDA job id: 6963078120
[2026-01-08 21:18:29] 2026-01-09 02:17:53,569 | INFO     | task id: 47898826
[2026-01-08 21:18:29] 2026-01-09 02:17:53,569 | INFO     | errors: (none)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,569 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | pilot state: finished 
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | transexitcode: 0
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | exeerrorcode: 0
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | exeerrordiag: 
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | exitcode: 0
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | exitmsg: OK
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | cpuconsumptiontime: 48148 s
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | nevents: 400
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | neventsw: 0
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | pid: 1573538
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | pgrp: 1573538
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | corecount: 8
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | event service: False
[2026-01-08 21:18:29] 2026-01-09 02:17:53,570 | INFO     | sizes: {0: 2283141, 1: 2283997, 12: 2283997, 23: 2284025, 34: 2284053, 41: 2284343, 44: 2284499, 22475: 2319124, 22479: 2328122, 22480: 2328178, 22499: 2328372}
[2026-01-08 21:18:29] 2026-01-09 02:17:53,571 | INFO     | --------------------------------------------------
[2026-01-08 21:18:29] 2026-01-09 02:17:53,571 | INFO     | 
[2026-01-08 21:18:29] 2026-01-09 02:17:53,571 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 21:18:29] 2026-01-09 02:17:53,691 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,691 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,692 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:18:29] 2026-01-09 02:17:53,693 | INFO     | job 6963078120 has completed (purged errors)
[2026-01-08 21:18:29] 2026-01-09 02:17:53,693 | INFO     | overall cleanup function is called
[2026-01-08 21:18:29] 2026-01-09 02:17:54,706 | INFO     | --- collectZombieJob: --- 10, [1573538]
[2026-01-08 21:18:29] 2026-01-09 02:17:54,706 | INFO     | zombie collector waiting for pid 1573538
[2026-01-08 21:18:29] 2026-01-09 02:17:54,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:18:29] 2026-01-09 02:17:54,706 | INFO     | collected zombie processes
[2026-01-08 21:18:29] 2026-01-09 02:17:54,706 | INFO     | will attempt to kill all subprocesses of pid=1573538
[2026-01-08 21:18:29] 2026-01-09 02:17:56,187 | INFO     | process IDs to be killed: [1573538] (in reverse order)
[2026-01-08 21:18:29] 2026-01-09 02:17:56,437 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:18:29] 2026-01-09 02:17:56,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:18:29] 2026-01-09 02:17:56,476 | INFO     | did not find any defunct processes belonging to 1573538
[2026-01-08 21:18:29] 2026-01-09 02:17:56,487 | INFO     | did not find any defunct processes belonging to 1573538
[2026-01-08 21:18:29] 2026-01-09 02:17:56,487 | INFO     | ready for new job
[2026-01-08 21:18:29] 2026-01-09 02:17:56,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:18:29] 2026-01-09 02:17:56,490 | INFO     | ***************************************
[2026-01-08 21:18:29] 2026-01-09 02:17:56,490 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:18:29] 2026-01-09 02:17:56,490 | INFO     | ***************************************
[2026-01-08 21:18:29] 2026-01-09 02:17:56,490 | INFO     | 
[2026-01-08 21:18:29] 2026-01-09 02:17:56,493 | INFO     | architecture information:
[2026-01-08 21:18:29] 2026-01-09 02:17:56,493 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:18:29] 2026-01-09 02:17:56,566 | INFO     | cat /etc/os-release:
[2026-01-08 21:18:29] NAME="CentOS Linux"
[2026-01-08 21:18:29] VERSION="7 (Core)"
[2026-01-08 21:18:29] ID="centos"
[2026-01-08 21:18:29] ID_LIKE="rhel fedora"
[2026-01-08 21:18:29] VERSION_ID="7"
[2026-01-08 21:18:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:18:29] ANSI_COLOR="0;31"
[2026-01-08 21:18:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:18:29] HOME_URL="https://www.centos.org/"
[2026-01-08 21:18:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:18:29] 
[2026-01-08 21:18:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:18:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:18:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:18:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:18:29] 
[2026-01-08 21:18:29] 2026-01-09 02:17:56,566 | INFO     | ***************************************
[2026-01-08 21:18:29] 2026-01-09 02:17:57,069 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 21:18:29] 2026-01-09 02:17:57,252 | INFO     | sufficient remaining disk space (85188411392 B)
[2026-01-08 21:18:29] 2026-01-09 02:17:57,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:18:29] 2026-01-09 02:17:57,253 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:18:29] 2026-01-09 02:17:57,253 | INFO     | update_server=False
[2026-01-08 21:18:29] 2026-01-09 02:17:57,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:18:29] 2026-01-09 02:17:57,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:18:29] 2026-01-09 02:17:57,302 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 21:18:29] 2026-01-09 02:17:57,302 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 21:18:29] 2026-01-09 02:17:57,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:18:29] 2026-01-09 02:17:57,302 | INFO     | will abort loop
[2026-01-08 21:18:29] 2026-01-09 02:17:57,883 | INFO     | all job control threads have been joined
[2026-01-08 21:18:29] 2026-01-09 02:17:57,920 | INFO     | all payload control threads have been joined
[2026-01-08 21:18:29] 2026-01-09 02:17:58,259 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:58,289 | INFO     | all data control threads have been joined
[2026-01-08 21:18:29] 2026-01-09 02:17:58,310 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:58,396 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:58,496 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:58,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:18:29] 2026-01-09 02:17:58,889 | INFO     | [job] control thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:58,926 | INFO     | [payload] control thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:18:29] 2026-01-09 02:17:59,259 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,294 | INFO     | [data] control thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,304 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,363 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,369 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,369 | INFO     | [job] validate thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,604 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:17:59,604 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:18:03,096 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:18:08,246 | INFO     | job.realtimelogging is not enabled
[2026-01-08 21:18:29] 2026-01-09 02:18:09,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:18:29] 2026-01-09 02:18:12,914 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:18:29] 2026-01-09 02:18:13,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392538613568)>', '<ExcThread(monitor, started 140392196462336)>']
[2026-01-08 21:18:29] 2026-01-09 02:18:18,145 | INFO     | all workflow threads have been joined
[2026-01-08 21:18:29] 2026-01-09 02:18:18,145 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:18:29] 2026-01-09 02:18:18,145 | INFO     | traces error code: 0
[2026-01-08 21:18:29] 2026-01-09 02:18:18,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:18:29] 2026-01-09 02:18:27,966 | INFO     | PID=1555327 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 21:18:29] 2026-01-09 02:18:27,966 | INFO     | .. there are 11 such processes running
[2026-01-08 21:18:29] 2026-01-09 02:18:27,966 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:18:29] 2026-01-09 02:18:27,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:18:29] 2026-01-09 02:18:27,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:18:29] 2026-01-09 02:18:27,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:18:29] 2026-01-09 02:18:27,967 | INFO     | [monitor] control thread has ended
[2026-01-08 21:18:29] 2026-01-09 02:18:28,438 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:18:29] 2026-01-09 02:18:28,455 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:18:29] 2026-01-09 02:18:28,465 [wrapper] pilotpid: 1555327
[2026-01-08 21:18:29] 2026-01-09 02:18:28,511 [wrapper] Pilot exit status: 0
[2026-01-08 21:18:29] 2026-01-09 02:18:28,690 [wrapper] pandaids: 6963078120
[2026-01-08 21:18:29] 2026-01-09 02:18:29,254 [wrapper] cleanup supervisor_pilot 2393148 1555328
[2026-01-08 21:18:29] 2026-01-09 02:18:29,287 [wrapper] Test setup, not cleaning
[2026-01-08 21:18:29] 2026-01-09 02:18:29,309 [wrapper] apfmon messages muted
[2026-01-08 21:18:29] 2026-01-09 02:18:29,397 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:18:29] 2026-01-09 02:18:29,419 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:18:29]  *** Error codes and diagnostics ***
[2026-01-08 21:18:29]     "exeErrorCode": 0,
[2026-01-08 21:18:29]     "exeErrorDiag": "",
[2026-01-08 21:18:29]     "pilotErrorCode": 0,
[2026-01-08 21:18:29]     "pilotErrorDiag": "",
[2026-01-08 21:18:29]  *** Listing of results directory ***
[2026-01-08 21:18:29] total 448144
[2026-01-08 21:18:29] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:09 queuedata.json
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:09 pilot3.tar.gz
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas       100 Jan  8 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:18:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 15:00 run_atlas
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas       105 Jan  8 15:00 job.xml
[2026-01-08 21:18:29] -rw-r--r--. 2 boincer umatlas 225617635 Jan  8 15:00 EVNT.47898824._001000.pool.root.1
[2026-01-08 21:18:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 15:00 start_atlas.sh
[2026-01-08 21:18:29] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 15:00 shared
[2026-01-08 21:18:29] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 15:00 input.tar.gz
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas         0 Jan  8 15:00 boinc_lockfile
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 15:00 pandaJob.out
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas        57 Jan  8 15:00 setup.sh.local
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas    989845 Jan  8 15:01 agis_schedconf.cvmfs.json
[2026-01-08 21:18:29] drwx------. 5 boincer umatlas      4096 Jan  8 15:01 pilot3
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas      6903 Jan  8 21:11 init_data.xml
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas 222385447 Jan  8 21:16 HITS.47898826._024497.pool.root.1
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas       531 Jan  8 21:16 boinc_task_state.xml
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas      1031 Jan  8 21:17 memory_monitor_summary.json
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas        95 Jan  8 21:17 pilot_heartbeat.json
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas   1516240 Jan  8 21:17 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas    580393 Jan  8 21:17 log.47898826._024497.job.log.tgz.1
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas      7778 Jan  8 21:17 heartbeat.json
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas        28 Jan  8 21:18 wrapper_checkpoint.txt
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 21:18 boinc_mmap_file
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas       823 Jan  8 21:18 pilotlog.txt
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas   2911522 Jan  8 21:18 log.47898826._024497.job.log.1
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas       357 Jan  8 21:18 output.list
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas       620 Jan  8 21:18 runtime_log
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas   3512320 Jan  8 21:18 result.tar.gz
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas       656 Jan  8 21:18 wReNDmy22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmH5eKDmoXsLCn.diag
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 21:18 runtime_log.err
[2026-01-08 21:18:29] -rw-r--r--. 1 boincer umatlas     21410 Jan  8 21:18 stderr.txt
[2026-01-08 21:18:29] HITS file was successfully produced:
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas 222385447 Jan  8 21:16 shared/HITS.pool.root.1
[2026-01-08 21:18:29]  *** Contents of shared directory: ***
[2026-01-08 21:18:29] total 441540
[2026-01-08 21:18:29] -rw-r--r--. 2 boincer umatlas 225617635 Jan  8 15:00 ATLAS.root_0
[2026-01-08 21:18:29] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 15:00 start_atlas.sh
[2026-01-08 21:18:29] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 15:00 input.tar.gz
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas 222385447 Jan  8 21:16 HITS.pool.root.1
[2026-01-08 21:18:29] -rw-------. 1 boincer umatlas   3512320 Jan  8 21:18 result.tar.gz
21:18:31 (1541947): run_atlas exited; CPU time 48545.349319
21:18:31 (1541947): called boinc_finish(0)

</stderr_txt>
]]>

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