Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:10:48 (1314939): wrapper (7.7.26015): starting
20:10:48 (1314939): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:10:48] Arguments: --nthreads 8
[2026-01-08 20:10:48] Threads: 8
[2026-01-08 20:10:48] Checking for CVMFS
[2026-01-08 20:10:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:10:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:10:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:10:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:10:49] 2.13.3.0 6317 20831 167784 154925 3 103 34799708 39288832 7327 16776704 0 6495098 99.416 11027297 39359 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 20:10:49] CVMFS is ok
[2026-01-08 20:10:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:10:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:10:49] Further information can be found at the LHC@home message board.
[2026-01-08 20:10:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:10:49] Checking for apptainer binary...
[2026-01-08 20:10:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:10:49] Running /usr/bin/apptainer --version
[2026-01-08 20:10:49] apptainer version 1.4.5-2.el9
[2026-01-08 20:10:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:10:49] c-211-18.aglt2.org
[2026-01-08 20:10:49] apptainer works
[2026-01-08 20:10:49] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:10:49] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:10:49] Starting ATLAS job with PandaID=6963144867
[2026-01-08 20:10:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:21:24]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:21:24] 2026-01-09 17:20:19,150 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 12:21:24] 2026-01-09 17:20:19,164 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9980499999997
[2026-01-09 12:21:24] 2026-01-09 17:20:19,180 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963144867/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:21:24] 2026-01-09 17:20:19,181 | INFO     | extracted standard info from prmon json
[2026-01-09 12:21:24] 2026-01-09 17:20:19,181 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:21:24] 2026-01-09 17:20:19,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:21:24] 2026-01-09 17:20:19,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:21:24] 2026-01-09 17:20:19,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:21:24] 2026-01-09 17:20:19,239 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:21:24] 2026-01-09 17:20:19,240 | INFO     | sum of square deviations: 267547047090.63892
[2026-01-09 12:21:24] 2026-01-09 17:20:19,335 | INFO     | sum of deviations: -221951285665.89078
[2026-01-09 12:21:24] 2026-01-09 17:20:19,336 | INFO     | mean x: 1767950107.6092436
[2026-01-09 12:21:24] 2026-01-09 17:20:19,336 | INFO     | mean y: 2508897.87394958
[2026-01-09 12:21:24] 2026-01-09 17:20:19,336 | INFO     | intersect: 1469162346.8431907
[2026-01-09 12:21:24] 2026-01-09 17:20:19,337 | INFO     | chi2: 6.078994055124895
[2026-01-09 12:21:24] 2026-01-09 17:20:19,343 | INFO     | sum of square deviations: 263354315768.27682
[2026-01-09 12:21:24] 2026-01-09 17:20:19,430 | INFO     | sum of deviations: 98700338759.12355
[2026-01-09 12:21:24] 2026-01-09 17:20:19,431 | INFO     | mean x: 1767949955.1203802
[2026-01-09 12:21:24] 2026-01-09 17:20:19,431 | INFO     | mean y: 2520558.656810982
[2026-01-09 12:21:24] 2026-01-09 17:20:19,431 | INFO     | intersect: -660074466.492112
[2026-01-09 12:21:24] 2026-01-09 17:20:19,432 | INFO     | chi2: 2.1240696571653666
[2026-01-09 12:21:24] 2026-01-09 17:20:19,433 | INFO     | current chi2=2.1240696571653666 (change=65.05886273445736 %)
[2026-01-09 12:21:24] 2026-01-09 17:20:19,434 | INFO     | sum of square deviations: 259205400604.21344
[2026-01-09 12:21:24] 2026-01-09 17:20:19,758 | INFO     | sum of deviations: 158623834141.72012
[2026-01-09 12:21:24] 2026-01-09 17:20:19,759 | INFO     | mean x: 1767949802.6273885
[2026-01-09 12:21:24] 2026-01-09 17:20:19,759 | INFO     | mean y: 2522751.569002123
[2026-01-09 12:21:24] 2026-01-09 17:20:19,759 | INFO     | intersect: -1079395200.7928867
[2026-01-09 12:21:24] 2026-01-09 17:20:19,805 | INFO     | chi2: 1.408118072084049
[2026-01-09 12:21:24] 2026-01-09 17:20:19,806 | INFO     | current chi2=1.408118072084049 (change=33.706596328708734 %)
[2026-01-09 12:21:24] 2026-01-09 17:20:19,807 | INFO     | sum of square deviations: 255099783654.38995
[2026-01-09 12:21:24] 2026-01-09 17:20:20,179 | INFO     | sum of deviations: 156407089399.40332
[2026-01-09 12:21:24] 2026-01-09 17:20:20,180 | INFO     | mean x: 1767949650.1248665
[2026-01-09 12:21:24] 2026-01-09 17:20:20,180 | INFO     | mean y: 2522669.227321238
[2026-01-09 12:21:24] 2026-01-09 17:20:20,180 | INFO     | intersect: -1081444769.0020812
[2026-01-09 12:21:24] 2026-01-09 17:20:20,181 | INFO     | chi2: 1.4081389651199583
[2026-01-09 12:21:24] 2026-01-09 17:20:20,202 | INFO     | current chi2=1.4081389651199583 (change=-0.0014837559664603035 %)
[2026-01-09 12:21:24] 2026-01-09 17:20:20,202 | INFO     | right removable region: 936
[2026-01-09 12:21:24] 2026-01-09 17:20:20,203 | INFO     | sum of square deviations: 263353090888.2769
[2026-01-09 12:21:24] 2026-01-09 17:20:20,487 | INFO     | sum of deviations: -359410891230.89124
[2026-01-09 12:21:24] 2026-01-09 17:20:20,488 | INFO     | mean x: 1767950260.1203802
[2026-01-09 12:21:24] 2026-01-09 17:20:20,488 | INFO     | mean y: 2513884.25343189
[2026-01-09 12:21:24] 2026-01-09 17:20:20,488 | INFO     | intersect: 2415322393.5384746
[2026-01-09 12:21:24] 2026-01-09 17:20:20,582 | INFO     | chi2: 4.778305471799777
[2026-01-09 12:21:24] 2026-01-09 17:20:20,583 | INFO     | current chi2=4.778305471799777 (change=21.39644440396471 %)
[2026-01-09 12:21:24] 2026-01-09 17:20:20,583 | INFO     | left removable region: 10
[2026-01-09 12:21:24] 2026-01-09 17:20:20,584 | INFO     | sum of square deviations: 246219713155.23132
[2026-01-09 12:21:24] 2026-01-09 17:20:20,962 | INFO     | sum of deviations: -10392820338.157688
[2026-01-09 12:21:24] 2026-01-09 17:20:20,962 | INFO     | mean x: 1767949924.6479483
[2026-01-09 12:21:24] 2026-01-09 17:20:21,021 | INFO     | mean y: 2528912.5485961125
[2026-01-09 12:21:24] 2026-01-09 17:20:21,021 | INFO     | intersect: 77153262.07068945
[2026-01-09 12:21:24] 2026-01-09 17:20:21,039 | INFO     | chi2: 0.0228912516310527
[2026-01-09 12:21:24] 2026-01-09 17:20:21,039 | INFO     | current memory leak: -0.04 B/s (using 926 data points, chi2=0.02)
[2026-01-09 12:21:24] 2026-01-09 17:20:21,040 | INFO     | could have reported an average CPU frequency of 2877 MHz (35 samples)
[2026-01-09 12:21:24] 2026-01-09 17:20:21,065 | INFO     | ..............................
[2026-01-09 12:21:24] 2026-01-09 17:20:21,065 | INFO     | . Timing measurements:
[2026-01-09 12:21:24] 2026-01-09 17:20:21,065 | INFO     | . get job = 0 s
[2026-01-09 12:21:24] 2026-01-09 17:20:21,065 | INFO     | . initial setup = 3 s
[2026-01-09 12:21:24] 2026-01-09 17:20:21,065 | INFO     | . payload setup = 8 s
[2026-01-09 12:21:24] 2026-01-09 17:20:21,066 | INFO     | . stage-in = 0 s
[2026-01-09 12:21:24] 2026-01-09 17:20:21,066 | INFO     | . payload execution = 58041 s
[2026-01-09 12:21:24] 2026-01-09 17:20:21,066 | INFO     | . stage-out = 18 s
[2026-01-09 12:21:24] 2026-01-09 17:20:21,066 | INFO     | . log creation = 4 s
[2026-01-09 12:21:24] 2026-01-09 17:20:21,066 | INFO     | ..............................
[2026-01-09 12:21:24] 2026-01-09 17:20:24,458 | INFO     | 
[2026-01-09 12:21:24] 2026-01-09 17:20:24,458 | INFO     | job summary report
[2026-01-09 12:21:24] 2026-01-09 17:20:24,458 | INFO     | --------------------------------------------------
[2026-01-09 12:21:24] 2026-01-09 17:20:24,458 | INFO     | PanDA job id: 6963144867
[2026-01-09 12:21:24] 2026-01-09 17:20:24,459 | INFO     | task id: 47898826
[2026-01-09 12:21:24] 2026-01-09 17:20:24,459 | INFO     | errors: (none)
[2026-01-09 12:21:24] 2026-01-09 17:20:24,459 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:21:24] 2026-01-09 17:20:24,459 | INFO     | pilot state: finished 
[2026-01-09 12:21:24] 2026-01-09 17:20:24,459 | INFO     | transexitcode: 0
[2026-01-09 12:21:24] 2026-01-09 17:20:24,459 | INFO     | exeerrorcode: 0
[2026-01-09 12:21:24] 2026-01-09 17:20:24,459 | INFO     | exeerrordiag: 
[2026-01-09 12:21:24] 2026-01-09 17:20:24,460 | INFO     | exitcode: 0
[2026-01-09 12:21:24] 2026-01-09 17:20:24,460 | INFO     | exitmsg: OK
[2026-01-09 12:21:24] 2026-01-09 17:20:24,460 | INFO     | cpuconsumptiontime: 110412 s
[2026-01-09 12:21:24] 2026-01-09 17:20:24,460 | INFO     | nevents: 400
[2026-01-09 12:21:24] 2026-01-09 17:20:24,460 | INFO     | neventsw: 0
[2026-01-09 12:21:24] 2026-01-09 17:20:24,460 | INFO     | pid: 1335063
[2026-01-09 12:21:24] 2026-01-09 17:20:24,461 | INFO     | pgrp: 1335063
[2026-01-09 12:21:24] 2026-01-09 17:20:24,461 | INFO     | corecount: 8
[2026-01-09 12:21:24] 2026-01-09 17:20:24,461 | INFO     | event service: False
[2026-01-09 12:21:24] 2026-01-09 17:20:24,461 | INFO     | sizes: {0: 2283798, 1: 2283997, 2: 2283997, 6: 2284287, 12: 2284315, 58056: 2333433, 58079: 2342431, 58083: 2342487, 58139: 2342681}
[2026-01-09 12:21:24] 2026-01-09 17:20:24,461 | INFO     | --------------------------------------------------
[2026-01-09 12:21:24] 2026-01-09 17:20:24,461 | INFO     | 
[2026-01-09 12:21:24] 2026-01-09 17:20:24,489 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 12:21:24] 2026-01-09 17:20:24,931 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,931 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,932 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,932 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,934 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:21:24] 2026-01-09 17:20:24,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,934 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:21:24] 2026-01-09 17:20:24,934 | INFO     | job 6963144867 has completed (purged errors)
[2026-01-09 12:21:24] 2026-01-09 17:20:24,934 | INFO     | overall cleanup function is called
[2026-01-09 12:21:24] 2026-01-09 17:20:26,265 | INFO     | --- collectZombieJob: --- 10, [1335063]
[2026-01-09 12:21:24] 2026-01-09 17:20:26,265 | INFO     | zombie collector waiting for pid 1335063
[2026-01-09 12:21:24] 2026-01-09 17:20:26,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:21:24] 2026-01-09 17:20:26,265 | INFO     | collected zombie processes
[2026-01-09 12:21:24] 2026-01-09 17:20:26,265 | INFO     | will attempt to kill all subprocesses of pid=1335063
[2026-01-09 12:21:24] 2026-01-09 17:20:28,726 | INFO     | PID=1318929 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:21:24] 2026-01-09 17:20:28,726 | INFO     | .. there are 10 such processes running
[2026-01-09 12:21:24] 2026-01-09 17:20:30,534 | INFO     | process IDs to be killed: [1335063] (in reverse order)
[2026-01-09 12:21:24] 2026-01-09 17:20:32,289 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:21:24] 2026-01-09 17:20:32,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:21:24] 2026-01-09 17:20:32,373 | INFO     | did not find any defunct processes belonging to 1335063
[2026-01-09 12:21:24] 2026-01-09 17:20:32,487 | INFO     | did not find any defunct processes belonging to 1335063
[2026-01-09 12:21:24] 2026-01-09 17:20:32,488 | INFO     | ready for new job
[2026-01-09 12:21:24] 2026-01-09 17:20:32,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:21:24] 2026-01-09 17:20:32,517 | INFO     | ***************************************
[2026-01-09 12:21:24] 2026-01-09 17:20:32,518 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:21:24] 2026-01-09 17:20:32,518 | INFO     | ***************************************
[2026-01-09 12:21:24] 2026-01-09 17:20:32,518 | INFO     | 
[2026-01-09 12:21:24] 2026-01-09 17:20:32,544 | INFO     | architecture information:
[2026-01-09 12:21:24] 2026-01-09 17:20:32,562 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:21:24] 2026-01-09 17:20:32,615 | INFO     | cat /etc/os-release:
[2026-01-09 12:21:24] NAME="CentOS Linux"
[2026-01-09 12:21:24] VERSION="7 (Core)"
[2026-01-09 12:21:24] ID="centos"
[2026-01-09 12:21:24] ID_LIKE="rhel fedora"
[2026-01-09 12:21:24] VERSION_ID="7"
[2026-01-09 12:21:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:21:24] ANSI_COLOR="0;31"
[2026-01-09 12:21:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:21:24] HOME_URL="https://www.centos.org/"
[2026-01-09 12:21:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:21:24] 
[2026-01-09 12:21:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:21:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:21:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:21:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:21:24] 
[2026-01-09 12:21:24] 2026-01-09 17:20:32,615 | INFO     | ***************************************
[2026-01-09 12:21:24] 2026-01-09 17:20:33,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 12:21:24] 2026-01-09 17:20:33,181 | INFO     | sufficient remaining disk space (51592036352 B)
[2026-01-09 12:21:24] 2026-01-09 17:20:33,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:21:24] 2026-01-09 17:20:33,182 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:21:24] 2026-01-09 17:20:33,182 | INFO     | update_server=False
[2026-01-09 12:21:24] 2026-01-09 17:20:33,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:21:24] 2026-01-09 17:20:33,305 | INFO     | all payload control threads have been joined
[2026-01-09 12:21:24] 2026-01-09 17:20:33,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:21:24] 2026-01-09 17:20:33,558 | INFO     | aborting loop
[2026-01-09 12:21:24] 2026-01-09 17:20:33,594 | INFO     | all data control threads have been joined
[2026-01-09 12:21:24] 2026-01-09 17:20:33,667 | INFO     | all job control threads have been joined
[2026-01-09 12:21:24] 2026-01-09 17:20:33,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:21:24] 2026-01-09 17:20:33,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:21:24] 2026-01-09 17:20:34,188 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,311 | INFO     | [payload] control thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,325 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,335 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,345 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:21:24] 2026-01-09 17:20:34,389 | INFO     | [job] validate thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,438 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,589 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,595 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,602 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,605 | INFO     | [data] control thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,672 | INFO     | [job] control thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:34,775 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:35,279 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:36,356 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:20:37,928 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:21:24] 2026-01-09 17:21:04,960 | INFO     | PID=1318929 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:21:24] 2026-01-09 17:21:04,960 | INFO     | .. there are 10 such processes running
[2026-01-09 12:21:24] 2026-01-09 17:21:04,960 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:21:24] 2026-01-09 17:21:04,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:21:24] 2026-01-09 17:21:05,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:21:24] 2026-01-09 17:21:12,915 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:21:24] 2026-01-09 17:21:14,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098688677696)>', '<ExcThread(monitor, started 140098318354176)>']
[2026-01-09 12:21:24] 2026-01-09 17:21:15,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:21:24] 2026-01-09 17:21:15,373 | INFO     | [monitor] control thread has ended
[2026-01-09 12:21:24] 2026-01-09 17:21:19,802 | INFO     | all workflow threads have been joined
[2026-01-09 12:21:24] 2026-01-09 17:21:19,802 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:21:24] 2026-01-09 17:21:19,802 | INFO     | traces error code: 0
[2026-01-09 12:21:24] 2026-01-09 17:21:19,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:21:24] 2026-01-09 17:21:22,036 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:21:24] 2026-01-09 17:21:22,090 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:21:24] 2026-01-09 17:21:22,166 [wrapper] pilotpid: 1318929
[2026-01-09 12:21:24] 2026-01-09 17:21:22,210 [wrapper] Pilot exit status: 0
[2026-01-09 12:21:24] 2026-01-09 17:21:22,420 [wrapper] pandaids: 6963144867
[2026-01-09 12:21:24] 2026-01-09 17:21:23,243 [wrapper] cleanup supervisor_pilot 3010113 1318931
[2026-01-09 12:21:24] 2026-01-09 17:21:23,307 [wrapper] Test setup, not cleaning
[2026-01-09 12:21:24] 2026-01-09 17:21:23,357 [wrapper] apfmon messages muted
[2026-01-09 12:21:24] 2026-01-09 17:21:23,422 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:21:24] 2026-01-09 17:21:23,500 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:21:24]  *** Error codes and diagnostics ***
[2026-01-09 12:21:24]     "exeErrorCode": 0,
[2026-01-09 12:21:24]     "exeErrorDiag": "",
[2026-01-09 12:21:24]     "pilotErrorCode": 0,
[2026-01-09 12:21:24]     "pilotErrorDiag": "",
[2026-01-09 12:21:24]  *** Listing of results directory ***
[2026-01-09 12:21:24] total 447112
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 12:21:24] -rwx------. 1 boincer umatlas     36322 Jan  8 10:05 runpilot2-wrapper.sh
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:06 queuedata.json
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas       100 Jan  8 20:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:21:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 20:10 run_atlas
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas       105 Jan  8 20:10 job.xml
[2026-01-09 12:21:24] -rw-r--r--. 2 boincer umatlas 223004747 Jan  8 20:10 EVNT.47898824._001036.pool.root.1
[2026-01-09 12:21:24] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:10 start_atlas.sh
[2026-01-09 12:21:24] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 20:10 shared
[2026-01-09 12:21:24] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 20:10 input.tar.gz
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas         0 Jan  8 20:10 boinc_lockfile
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 20:10 pandaJob.out
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas        57 Jan  8 20:10 setup.sh.local
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas    989837 Jan  8 20:11 agis_schedconf.cvmfs.json
[2026-01-09 12:21:24] drwx------. 5 boincer umatlas      4096 Jan  8 20:11 pilot3
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas 216362021 Jan  9 12:12 HITS.47898826._025847.pool.root.1
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas       532 Jan  9 12:13 boinc_task_state.xml
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas      6526 Jan  9 12:18 init_data.xml
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas      1040 Jan  9 12:18 memory_monitor_summary.json
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:19 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas    929563 Jan  9 12:19 log.47898826._025847.job.log.tgz.1
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas        95 Jan  9 12:20 pilot_heartbeat.json
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas      7819 Jan  9 12:20 heartbeat.json
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:20 boinc_mmap_file
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas        29 Jan  9 12:20 wrapper_checkpoint.txt
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas      4824 Jan  9 12:21 pilotlog.txt
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas   6352717 Jan  9 12:21 log.47898826._025847.job.log.1
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas       357 Jan  9 12:21 output.list
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:21 runtime_log
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas   7301120 Jan  9 12:21 result.tar.gz
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 12:21 runtime_log.err
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas       659 Jan  9 12:21 9fHLDm0k6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmthkKDmITEmRm.diag
[2026-01-09 12:21:24] -rw-r--r--. 1 boincer umatlas     21219 Jan  9 12:21 stderr.txt
[2026-01-09 12:21:24] HITS file was successfully produced:
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas 216362021 Jan  9 12:12 shared/HITS.pool.root.1
[2026-01-09 12:21:24]  *** Contents of shared directory: ***
[2026-01-09 12:21:24] total 436804
[2026-01-09 12:21:24] -rw-r--r--. 2 boincer umatlas 223004747 Jan  8 20:10 ATLAS.root_0
[2026-01-09 12:21:24] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:10 start_atlas.sh
[2026-01-09 12:21:24] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 20:10 input.tar.gz
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas 216362021 Jan  9 12:12 HITS.pool.root.1
[2026-01-09 12:21:24] -rw-------. 1 boincer umatlas   7301120 Jan  9 12:21 result.tar.gz
12:21:26 (1314939): run_atlas exited; CPU time 112118.041395
12:21:26 (1314939): called boinc_finish(0)

</stderr_txt>
]]>

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